RNA–Protein interactions for RNA: ENST00000476970.1

PRPF3-205, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 1,005 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-205ENST00000476970 PHF8Q9UPP1 1060 aa11.22□□□□□ -0.61
PRPF3-205ENST00000476970 APBA3O96018 575 aa11.21□□□□□ -0.61
PRPF3-205ENST00000476970 FAM182BQ5T319 152 aa11.21□□□□□ -0.61
PRPF3-205ENST00000476970 RNF216Q9NWF9 866 aaPredicted RBP11.21□□□□□ -0.61
PRPF3-205ENST00000476970 TRPM3Q9HCF6 1732 aaPredicted RBP11.21□□□□□ -0.62
PRPF3-205ENST00000476970 ABCC11Q96J66 1382 aa11.2□□□□□ -0.62
PRPF3-205ENST00000476970 KCNQ2O43526 872 aa11.2□□□□□ -0.62
PRPF3-205ENST00000476970 TRIM37O94972 964 aa11.2□□□□□ -0.62
PRPF3-205ENST00000476970 ZNF784Q8NCA9 323 aaPredicted RBP11.2□□□□□ -0.62
PRPF3-205ENST00000476970 RGPD3A6NKT7 1758 aaPredicted RBP11.2□□□□□ -0.62
PRPF3-205ENST00000476970 RGPD4Q7Z3J3 1758 aa11.2□□□□□ -0.62
PRPF3-205ENST00000476970 ALS2Q96Q42 1657 aa11.2□□□□□ -0.62
PRPF3-205ENST00000476970 WAPLQ7Z5K2 1190 aa11.19□□□□□ -0.62
PRPF3-205ENST00000476970 STK26Q9P289 416 aa11.19□□□□□ -0.62
PRPF3-205ENST00000476970 CRYBG1Q9Y4K1 1723 aa11.18□□□□□ -0.62
PRPF3-205ENST00000476970 LOC105371045A0A1W2PR82 267 aa11.18□□□□□ -0.62
PRPF3-205ENST00000476970 PLEKHH1Q9ULM0 1364 aa11.17□□□□□ -0.62
PRPF3-205ENST00000476970 NRKQ7Z2Y5 1582 aa11.17□□□□□ -0.62
PRPF3-205ENST00000476970 ANKARQ7Z5J8 1434 aa11.17□□□□□ -0.62
PRPF3-205ENST00000476970 C1QTNF8P60827 252 aa11.16□□□□□ -0.62
PRPF3-205ENST00000476970 YTHDC2Q9H6S0 1430 aaKnown RBP11.16□□□□□ -0.62
PRPF3-205ENST00000476970 CASZ1Q86V15 1759 aa11.16□□□□□ -0.62
PRPF3-205ENST00000476970 SPATA31A1Q5TZJ5 1347 aa11.15□□□□□ -0.62
PRPF3-205ENST00000476970 ITGAEP38570 1179 aa11.15□□□□□ -0.62
PRPF3-205ENST00000476970 PRDM11Q9NQV5 511 aa11.15□□□□□ -0.62
PRPF3-205ENST00000476970 GPRASP1Q5JY77 1395 aa11.15□□□□□ -0.63
PRPF3-205ENST00000476970 ANKRD30BQ9BXX2 1392 aa11.15□□□□□ -0.63
PRPF3-205ENST00000476970 UTRNP46939 3433 aa11.15□□□□□ -0.63
PRPF3-205ENST00000476970 MYOM1P52179 1685 aa11.14□□□□□ -0.63
PRPF3-205ENST00000476970 PDE3BQ13370 1112 aa11.14□□□□□ -0.63
PRPF3-205ENST00000476970 PIK3C2GO75747 1445 aa11.13□□□□□ -0.63
PRPF3-205ENST00000476970 C11orf95C9JLR9 678 aaPredicted RBP11.13□□□□□ -0.63
PRPF3-205ENST00000476970 KCNA4P22459 653 aa11.13□□□□□ -0.63
PRPF3-205ENST00000476970 SIRT1Q96EB6 747 aa11.13□□□□□ -0.63
PRPF3-205ENST00000476970 EIF3AQ14152 1382 aaKnown RBP11.13□□□□□ -0.63
PRPF3-205ENST00000476970 PHRF1Q9P1Y6 1649 aaKnown RBP11.13□□□□□ -0.63
PRPF3-205ENST00000476970 ADGRF5Q8IZF2 1346 aa11.12□□□□□ -0.63
PRPF3-205ENST00000476970 PARP4Q9UKK3 1724 aaKnown RBP11.12□□□□□ -0.63
PRPF3-205ENST00000476970 DLC1Q96QB1 1528 aa11.1□□□□□ -0.63
PRPF3-205ENST00000476970 ITSN1Q15811 1721 aa11.1□□□□□ -0.63
PRPF3-205ENST00000476970 TMEM132EQ6IEE7 984 aa11.1□□□□□ -0.63
PRPF3-205ENST00000476970 BARGINQ6ZT62 677 aa11.1□□□□□ -0.63
PRPF3-205ENST00000476970 PMFBP1Q8TBY8 1022 aa11.1□□□□□ -0.63
PRPF3-205ENST00000476970 STRN4Q9NRL3 753 aa11.1□□□□□ -0.63
PRPF3-205ENST00000476970 SBF2Q86WG5 1849 aa11.09□□□□□ -0.63
PRPF3-205ENST00000476970 CEP350Q5VT06 3117 aa11.09□□□□□ -0.63
PRPF3-205ENST00000476970 KIAA0232Q92628 1395 aa11.09□□□□□ -0.63
PRPF3-205ENST00000476970 SSH2Q76I76 1423 aa11.09□□□□□ -0.63
PRPF3-205ENST00000476970 ACIN1Q9UKV3 1341 aaKnown RBP11.09□□□□□ -0.63
PRPF3-205ENST00000476970 DHX57Q6P158 1386 aaKnown RBP11.08□□□□□ -0.64
PRPF3-205ENST00000476970 GIGYF1O75420 1035 aaPredicted RBP11.08□□□□□ -0.64
PRPF3-205ENST00000476970 TULP4Q9NRJ4 1543 aa11.08□□□□□ -0.64
PRPF3-205ENST00000476970 OVOS2A0A0G2JMS6 1433 aa11.08□□□□□ -0.64
PRPF3-205ENST00000476970 OVOS2A0A0J9YW53 1432 aa11.08□□□□□ -0.64
PRPF3-205ENST00000476970 OVOS2Q6IE36 1432 aa11.08□□□□□ -0.64
PRPF3-205ENST00000476970 ATP7BP35670 1465 aa11.07□□□□□ -0.64
PRPF3-205ENST00000476970 SLC4A1APQ9BWU0 796 aaKnown RBP11.07□□□□□ -0.64
PRPF3-205ENST00000476970 USP35Q9P2H5 1018 aa11.07□□□□□ -0.64
PRPF3-205ENST00000476970 SPATA31E1Q6ZUB1 1445 aa11.07□□□□□ -0.64
PRPF3-205ENST00000476970 PEAK1Q9H792 1746 aa11.06□□□□□ -0.64
PRPF3-205ENST00000476970 PAK3O75914 559 aaPredicted RBP11.06□□□□□ -0.64
PRPF3-205ENST00000476970 NCBP3Q53F19 620 aaKnown RBP11.06□□□□□ -0.64
PRPF3-205ENST00000476970 PLSCR1O15162 318 aa11.05□□□□□ -0.64
PRPF3-205ENST00000476970 EVA1CP58658 441 aa11.05□□□□□ -0.64
PRPF3-205ENST00000476970 SAFB2Q14151 953 aaKnown RBP eCLIP11.05□□□□□ -0.64
PRPF3-205ENST00000476970 RGL3Q3MIN7 710 aa11.05□□□□□ -0.64
PRPF3-205ENST00000476970 TCP11L2Q8N4U5 519 aa11.05□□□□□ -0.64
PRPF3-205ENST00000476970 PRAM1Q96QH2 718 aa11.05□□□□□ -0.64
PRPF3-205ENST00000476970 POGKQ9P215 609 aa11.05□□□□□ -0.64
PRPF3-205ENST00000476970 THRAP3Q9Y2W1 955 aaKnown RBP11.05□□□□□ -0.64
PRPF3-205ENST00000476970 AKAP12Q02952 1782 aa11.04□□□□□ -0.64
PRPF3-205ENST00000476970 ZBTB7AO95365 584 aa11.04□□□□□ -0.64
PRPF3-205ENST00000476970 PTGER2P43116 358 aa11.04□□□□□ -0.64
PRPF3-205ENST00000476970 CHRNA2Q15822 529 aa11.04□□□□□ -0.64
PRPF3-205ENST00000476970 NGDNQ8NEJ9 315 aaKnown RBP11.04□□□□□ -0.64
PRPF3-205ENST00000476970 SYT17Q9BSW7 474 aa11.04□□□□□ -0.64
PRPF3-205ENST00000476970 FHDC1Q9C0D6 1143 aaPredicted RBP11.04□□□□□ -0.64
PRPF3-205ENST00000476970 BCL11BQ9C0K0 894 aaPredicted RBP11.04□□□□□ -0.64
PRPF3-205ENST00000476970 ANO8Q9HCE9 1232 aaPredicted RBP11.04□□□□□ -0.64
PRPF3-205ENST00000476970 LMO7Q8WWI1 1683 aa11.04□□□□□ -0.64
PRPF3-205ENST00000476970 LRRC37A3O60309 1634 aa11.03□□□□□ -0.64
PRPF3-205ENST00000476970 MAP3K5Q99683 1374 aa11.03□□□□□ -0.64
PRPF3-205ENST00000476970 WNK3Q9BYP7 1800 aa11.02□□□□□ -0.64
PRPF3-205ENST00000476970 C14orf93Q9H972 538 aaKnown RBP11.02□□□□□ -0.65
PRPF3-205ENST00000476970 STK32BQ9NY57 414 aa11.02□□□□□ -0.65
PRPF3-205ENST00000476970 ZC3H6P61129 1189 aaKnown RBP11.01□□□□□ -0.65
PRPF3-205ENST00000476970 MTFR1LQ9H019 292 aa11.01□□□□□ -0.65
PRPF3-205ENST00000476970 ATF5Q9Y2D1 282 aaPredicted RBP11.01□□□□□ -0.65
PRPF3-205ENST00000476970 LARP1Q6PKG0 1096 aaKnown RBP11□□□□□ -0.65
PRPF3-205ENST00000476970 PRR36Q9H6K5 1346 aa11□□□□□ -0.65
PRPF3-205ENST00000476970 CPDO75976 1380 aa11□□□□□ -0.65
PRPF3-205ENST00000476970 SHANK3Q9BYB0 1731 aa10.99□□□□□ -0.65
PRPF3-205ENST00000476970 GPR162Q16538 588 aa10.99□□□□□ -0.65
PRPF3-205ENST00000476970 CRB1P82279 1406 aa10.99□□□□□ -0.65
PRPF3-205ENST00000476970 COL5A2P05997 1499 aaPredicted RBP10.99□□□□□ -0.65
PRPF3-205ENST00000476970 TOPAZ1Q8N9V7 1692 aa10.98□□□□□ -0.65
PRPF3-205ENST00000476970 NPM3O75607 178 aaKnown RBP10.98□□□□□ -0.65
PRPF3-205ENST00000476970 HIRIP3Q9BW71 556 aaPredicted RBP10.98□□□□□ -0.65
PRPF3-205ENST00000476970 PDGFDQ9GZP0 370 aaPredicted RBP10.98□□□□□ -0.65
PRPF3-205ENST00000476970 WASLO00401 505 aaPredicted RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms