RNA–Protein interactions for RNA: ENST00000476825.2

SPTAN1-207, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 3

Gene SPTAN1, Length 635 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-207ENST00000476825 PMFBP1Q8TBY8 1022 aa12.7□□□□□ -0.38
SPTAN1-207ENST00000476825 DDX17Q92841 729 aaKnown RBP12.7□□□□□ -0.38
SPTAN1-207ENST00000476825 CABP1Q9NZU7 370 aa12.7□□□□□ -0.38
SPTAN1-207ENST00000476825 TNS3Q68CZ2 1445 aa12.7□□□□□ -0.38
SPTAN1-207ENST00000476825 NPHP3Q7Z494 1330 aa12.69□□□□□ -0.38
SPTAN1-207ENST00000476825 SLC12A5Q9H2X9 1139 aa12.69□□□□□ -0.38
SPTAN1-207ENST00000476825 SBNO1A3KN83 1393 aa12.69□□□□□ -0.38
SPTAN1-207ENST00000476825 ILDR2Q71H61 639 aa12.68□□□□□ -0.38
SPTAN1-207ENST00000476825 EDC4Q6P2E9 1401 aaKnown RBP12.68□□□□□ -0.38
SPTAN1-207ENST00000476825 BRD4O60885 1362 aaPredicted RBP12.68□□□□□ -0.38
SPTAN1-207ENST00000476825 SLIT3O75094 1523 aa12.67□□□□□ -0.38
SPTAN1-207ENST00000476825 SCAF1Q9H7N4 1312 aaKnown RBP12.67□□□□□ -0.38
SPTAN1-207ENST00000476825 LTN1O94822 1766 aa12.67□□□□□ -0.38
SPTAN1-207ENST00000476825 FOXO3O43524 673 aa12.67□□□□□ -0.38
SPTAN1-207ENST00000476825 KTN1Q86UP2 1357 aaKnown RBP12.66□□□□□ -0.38
SPTAN1-207ENST00000476825 HSPA1LP34931 641 aa12.65□□□□□ -0.38
SPTAN1-207ENST00000476825 XPCQ01831 940 aaPredicted RBP12.65□□□□□ -0.38
SPTAN1-207ENST00000476825 NGDNQ8NEJ9 315 aaKnown RBP12.65□□□□□ -0.38
SPTAN1-207ENST00000476825 PNPLA6Q8IY17 1366 aa12.65□□□□□ -0.38
SPTAN1-207ENST00000476825 SPATA31A3Q5VYP0 1347 aa12.64□□□□□ -0.39
SPTAN1-207ENST00000476825 OVOS2A0A0J9YW53 1432 aa12.64□□□□□ -0.39
SPTAN1-207ENST00000476825 OVOS2Q6IE36 1432 aa12.64□□□□□ -0.39
SPTAN1-207ENST00000476825 NSD3Q9BZ95 1437 aa12.64□□□□□ -0.39
SPTAN1-207ENST00000476825 KRT28Q7Z3Y7 464 aa12.64□□□□□ -0.39
SPTAN1-207ENST00000476825 TMC1Q8TDI8 760 aa12.64□□□□□ -0.39
SPTAN1-207ENST00000476825 PLCH1Q4KWH8 1693 aa12.64□□□□□ -0.39
SPTAN1-207ENST00000476825 NFAT5O94916 1531 aa12.63□□□□□ -0.39
SPTAN1-207ENST00000476825 TERF2IPQ9NYB0 399 aa12.63□□□□□ -0.39
SPTAN1-207ENST00000476825 RGPD5Q99666 1765 aa12.63□□□□□ -0.39
SPTAN1-207ENST00000476825 COL18A1P39060 1754 aa12.62□□□□□ -0.39
SPTAN1-207ENST00000476825 POLR3GLQ9BT43 218 aa12.62□□□□□ -0.39
SPTAN1-207ENST00000476825 ZNF692Q9BU19 519 aaPredicted RBP12.62□□□□□ -0.39
SPTAN1-207ENST00000476825 CARD14Q9BXL6 1004 aa12.62□□□□□ -0.39
SPTAN1-207ENST00000476825 MAP2P11137 1827 aaKnown RBP12.62□□□□□ -0.39
SPTAN1-207ENST00000476825 LRP6O75581 1613 aa12.62□□□□□ -0.39
SPTAN1-207ENST00000476825 TTC21BQ7Z4L5 1316 aa12.62□□□□□ -0.39
SPTAN1-207ENST00000476825 TTC21AQ8NDW8 1320 aa12.62□□□□□ -0.39
SPTAN1-207ENST00000476825 ARHGEF10O15013 1369 aa12.61□□□□□ -0.39
SPTAN1-207ENST00000476825 USP31Q70CQ4 1352 aa12.61□□□□□ -0.39
SPTAN1-207ENST00000476825 JCADQ9P266 1359 aa12.61□□□□□ -0.39
SPTAN1-207ENST00000476825 PSME1Q06323 249 aa12.61□□□□□ -0.39
SPTAN1-207ENST00000476825 HDGFL2Q7Z4V5 671 aaPredicted RBP12.61□□□□□ -0.39
SPTAN1-207ENST00000476825 NRAPQ86VF7 1730 aa12.61□□□□□ -0.39
SPTAN1-207ENST00000476825 LMO7Q8WWI1 1683 aa12.61□□□□□ -0.39
SPTAN1-207ENST00000476825 ZNF316A6NFI3 1004 aaPredicted RBP12.6□□□□□ -0.39
SPTAN1-207ENST00000476825 USP19O94966 1318 aa12.6□□□□□ -0.39
SPTAN1-207ENST00000476825 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.59□□□□□ -0.39
SPTAN1-207ENST00000476825 NWD2Q9ULI1 1742 aa12.59□□□□□ -0.39
SPTAN1-207ENST00000476825 COL14A1Q05707 1796 aaKnown RBP12.59□□□□□ -0.39
SPTAN1-207ENST00000476825 LRRC59Q96AG4 307 aaKnown RBP12.59□□□□□ -0.39
SPTAN1-207ENST00000476825 PANK3Q9H999 370 aa12.59□□□□□ -0.39
SPTAN1-207ENST00000476825 PEAK1Q9H792 1746 aa12.59□□□□□ -0.39
SPTAN1-207ENST00000476825 PER1O15534 1290 aaPredicted RBP12.58□□□□□ -0.4
SPTAN1-207ENST00000476825 NME9Q86XW9 330 aa12.57□□□□□ -0.4
SPTAN1-207ENST00000476825 ABCC6O95255 1503 aa12.57□□□□□ -0.4
SPTAN1-207ENST00000476825 NSD2O96028 1365 aa12.56□□□□□ -0.4
SPTAN1-207ENST00000476825 NPC1L1Q9UHC9 1359 aa12.56□□□□□ -0.4
SPTAN1-207ENST00000476825 WNK3Q9BYP7 1800 aa12.55□□□□□ -0.4
SPTAN1-207ENST00000476825 PAK3O75914 559 aaPredicted RBP12.55□□□□□ -0.4
SPTAN1-207ENST00000476825 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.55□□□□□ -0.4
SPTAN1-207ENST00000476825 ZRANB1Q9UGI0 708 aa12.55□□□□□ -0.4
SPTAN1-207ENST00000476825 FAM208AQ9UK61 1670 aaKnown RBP12.54□□□□□ -0.4
SPTAN1-207ENST00000476825 RGPD2P0DJD1 1756 aa12.54□□□□□ -0.4
SPTAN1-207ENST00000476825 FYB1O15117 783 aa12.54□□□□□ -0.4
SPTAN1-207ENST00000476825 AMER1Q5JTC6 1135 aaPredicted RBP12.54□□□□□ -0.4
SPTAN1-207ENST00000476825 ABTB2Q8N961 1025 aa12.54□□□□□ -0.4
SPTAN1-207ENST00000476825 SPATA31A6Q5VVP1 1343 aa12.54□□□□□ -0.4
SPTAN1-207ENST00000476825 CGNL1Q0VF96 1302 aa12.53□□□□□ -0.4
SPTAN1-207ENST00000476825 SMG6Q86US8 1419 aaKnown RBP12.53□□□□□ -0.4
SPTAN1-207ENST00000476825 CAMTA1Q9Y6Y1 1673 aa12.52□□□□□ -0.4
SPTAN1-207ENST00000476825 NUTM2GQ5VZR2 741 aa12.52□□□□□ -0.41
SPTAN1-207ENST00000476825 CPDO75976 1380 aa12.52□□□□□ -0.41
SPTAN1-207ENST00000476825 DDX10Q13206 875 aaKnown RBP12.51□□□□□ -0.41
SPTAN1-207ENST00000476825 NLRP13Q86W25 1043 aa12.51□□□□□ -0.41
SPTAN1-207ENST00000476825 CABLES1Q8TDN4 633 aa12.51□□□□□ -0.41
SPTAN1-207ENST00000476825 GGNBP2Q9H3C7 697 aa12.51□□□□□ -0.41
SPTAN1-207ENST00000476825 NLRP6P59044 892 aa12.5□□□□□ -0.41
SPTAN1-207ENST00000476825 LMOD2Q6P5Q4 547 aa12.5□□□□□ -0.41
SPTAN1-207ENST00000476825 SLIT2O94813 1529 aa12.5□□□□□ -0.41
SPTAN1-207ENST00000476825 RGPD1P0DJD0 1748 aa12.49□□□□□ -0.41
SPTAN1-207ENST00000476825 AATKQ6ZMQ8 1374 aa12.49□□□□□ -0.41
SPTAN1-207ENST00000476825 PARD3Q8TEW0 1356 aa12.49□□□□□ -0.41
SPTAN1-207ENST00000476825 KNSTRNQ9Y448 316 aa12.49□□□□□ -0.41
SPTAN1-207ENST00000476825 COG3Q96JB2 828 aa12.48□□□□□ -0.41
SPTAN1-207ENST00000476825 CDK12Q9NYV4 1490 aaPredicted RBP12.47□□□□□ -0.41
SPTAN1-207ENST00000476825 KIAA0232Q92628 1395 aa12.47□□□□□ -0.41
SPTAN1-207ENST00000476825 GCP02774 474 aa12.47□□□□□ -0.41
SPTAN1-207ENST00000476825 COL3A1P02461 1466 aaPredicted RBP12.46□□□□□ -0.41
SPTAN1-207ENST00000476825 KCNH5Q8NCM2 988 aa12.46□□□□□ -0.41
SPTAN1-207ENST00000476825 COL5A2P05997 1499 aaPredicted RBP12.46□□□□□ -0.42
SPTAN1-207ENST00000476825 RTL1A6NKG5 1358 aa12.45□□□□□ -0.42
SPTAN1-207ENST00000476825 PLEKHG5O94827 1062 aa12.45□□□□□ -0.42
SPTAN1-207ENST00000476825 CC2D1BQ5T0F9 858 aaKnown RBP12.45□□□□□ -0.42
SPTAN1-207ENST00000476825 KIF24Q5T7B8 1368 aa12.44□□□□□ -0.42
SPTAN1-207ENST00000476825 MAP3K19Q56UN5 1328 aa12.44□□□□□ -0.42
SPTAN1-207ENST00000476825 NUTM2BA6NNL0 878 aaPredicted RBP12.44□□□□□ -0.42
SPTAN1-207ENST00000476825 NUTM2EB1AL46 878 aaPredicted RBP12.44□□□□□ -0.42
SPTAN1-207ENST00000476825 ARHGEF25Q86VW2 580 aa12.44□□□□□ -0.42
SPTAN1-207ENST00000476825 NUTM2AQ8IVF1 878 aaPredicted RBP12.44□□□□□ -0.42
SPTAN1-207ENST00000476825 BCL9LQ86UU0 1499 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms