RNA–Protein interactions for RNA: ENST00000476553.1

NUP58-209, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-209ENST00000476553 PRR7Q8TB68 274 aa12.9□□□□□ -0.34
NUP58-209ENST00000476553 KDM2AQ9Y2K7 1162 aa12.9□□□□□ -0.34
NUP58-209ENST00000476553 SLC24A1O60721 1099 aa12.89□□□□□ -0.35
NUP58-209ENST00000476553 WDR4P57081 412 aaKnown RBP12.89□□□□□ -0.35
NUP58-209ENST00000476553 SCARF1Q14162 830 aa12.89□□□□□ -0.35
NUP58-209ENST00000476553 MOXD2PA6NHM9 499 aa12.88□□□□□ -0.35
NUP58-209ENST00000476553 NDUFV2P19404 249 aa12.88□□□□□ -0.35
NUP58-209ENST00000476553 SPDYE5A6NIY4 337 aa12.87□□□□□ -0.35
NUP58-209ENST00000476553 SOBPA7XYQ1 873 aa12.87□□□□□ -0.35
NUP58-209ENST00000476553 KRI1Q8N9T8 703 aaKnown RBP12.87□□□□□ -0.35
NUP58-209ENST00000476553 SSTR3P32745 418 aaPredicted RBP12.86□□□□□ -0.35
NUP58-209ENST00000476553 MTMR2Q13614 643 aa12.86□□□□□ -0.35
NUP58-209ENST00000476553 CDK15Q96Q40 435 aa12.84□□□□□ -0.35
NUP58-209ENST00000476553 FAM174AQ8TBP5 190 aa12.83□□□□□ -0.36
NUP58-209ENST00000476553 GJA5P36382 358 aa12.8□□□□□ -0.36
NUP58-209ENST00000476553 LYPD8Q6UX82 237 aa12.8□□□□□ -0.36
NUP58-209ENST00000476553 ZFAND3Q9H8U3 227 aa12.79□□□□□ -0.36
NUP58-209ENST00000476553 ZIC2O95409 532 aaPredicted RBP12.78□□□□□ -0.36
NUP58-209ENST00000476553 F12P00748 615 aaPredicted RBP12.78□□□□□ -0.36
NUP58-209ENST00000476553 NR3C2P08235 984 aa12.78□□□□□ -0.36
NUP58-209ENST00000476553 HAP1P54257 671 aaPredicted RBP12.78□□□□□ -0.36
NUP58-209ENST00000476553 FOXJ1Q92949 421 aa12.78□□□□□ -0.36
NUP58-209ENST00000476553 ITPKCQ96DU7 683 aa12.78□□□□□ -0.36
NUP58-209ENST00000476553 GSK3AP49840 483 aa12.77□□□□□ -0.37
NUP58-209ENST00000476553 AMHR2Q16671 573 aa12.77□□□□□ -0.37
NUP58-209ENST00000476553 MAN1A2O60476 641 aa12.76□□□□□ -0.37
NUP58-209ENST00000476553 CTHP32929 405 aa12.76□□□□□ -0.37
NUP58-209ENST00000476553 KCNMA1Q12791 1236 aa12.76□□□□□ -0.37
NUP58-209ENST00000476553 NR5A1Q13285 461 aa12.75□□□□□ -0.37
NUP58-209ENST00000476553 TTLL12Q14166 644 aaPredicted RBP12.75□□□□□ -0.37
NUP58-209ENST00000476553 MAP10Q9P2G4 905 aa12.75□□□□□ -0.37
NUP58-209ENST00000476553 CFAP99D6REC4 459 aa12.74□□□□□ -0.37
NUP58-209ENST00000476553 PPFIA3O75145 1194 aa12.74□□□□□ -0.37
NUP58-209ENST00000476553 C4orf48Q5BLP8 95 aa12.74□□□□□ -0.37
NUP58-209ENST00000476553 RSBN1LQ6PCB5 846 aaPredicted RBP12.74□□□□□ -0.37
NUP58-209ENST00000476553 GIGYF2Q6Y7W6 1299 aaKnown RBP12.74□□□□□ -0.37
NUP58-209ENST00000476553 MEIOBQ8N635 442 aa12.74□□□□□ -0.37
NUP58-209ENST00000476553 C6orf118Q5T5N4 469 aa12.73□□□□□ -0.37
NUP58-209ENST00000476553 GRM5P41594 1212 aa12.72□□□□□ -0.37
NUP58-209ENST00000476553 ARID5BQ14865 1188 aa12.72□□□□□ -0.37
NUP58-209ENST00000476553 LINC00528Q8N1L1 170 aa12.72□□□□□ -0.37
NUP58-209ENST00000476553 SUZ12Q15022 739 aaKnown RBP12.71□□□□□ -0.37
NUP58-209ENST00000476553 BEGAINQ9BUH8 593 aa12.71□□□□□ -0.37
NUP58-209ENST00000476553 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.7□□□□□ -0.38
NUP58-209ENST00000476553 TBC1D2Q9BYX2 928 aa12.7□□□□□ -0.38
NUP58-209ENST00000476553 SOS2Q07890 1332 aaPredicted RBP12.69□□□□□ -0.38
NUP58-209ENST00000476553 DNMT3LQ9UJW3 386 aa12.69□□□□□ -0.38
NUP58-209ENST00000476553 PCDHB15Q9Y5E8 787 aa12.69□□□□□ -0.38
NUP58-209ENST00000476553 SPTLC1O15269 473 aa12.68□□□□□ -0.38
NUP58-209ENST00000476553 C1QTNF2Q9BXJ5 285 aa12.68□□□□□ -0.38
NUP58-209ENST00000476553 BMP2P12643 396 aa12.67□□□□□ -0.38
NUP58-209ENST00000476553 HRCP23327 699 aa12.67□□□□□ -0.38
NUP58-209ENST00000476553 KRT76Q01546 638 aa12.67□□□□□ -0.38
NUP58-209ENST00000476553 DIXDC1Q155Q3 683 aa12.67□□□□□ -0.38
NUP58-209ENST00000476553 BARGINQ6ZT62 677 aa12.67□□□□□ -0.38
NUP58-209ENST00000476553 BPHLQ86WA6 291 aaPredicted RBP12.67□□□□□ -0.38
NUP58-209ENST00000476553 ZBTB3Q9H5J0 574 aa12.67□□□□□ -0.38
NUP58-209ENST00000476553 UPP2O95045 317 aa12.65□□□□□ -0.38
NUP58-209ENST00000476553 PRPF38BQ5VTL8 546 aaKnown RBP12.65□□□□□ -0.38
NUP58-209ENST00000476553 KCTD17Q8N5Z5 321 aa12.65□□□□□ -0.38
NUP58-209ENST00000476553 MAP4K5Q9Y4K4 846 aa12.64□□□□□ -0.39
NUP58-209ENST00000476553 PER1O15534 1290 aaPredicted RBP12.63□□□□□ -0.39
NUP58-209ENST00000476553 AGERQ15109 404 aa12.63□□□□□ -0.39
NUP58-209ENST00000476553 SH3RF1Q7Z6J0 888 aa12.63□□□□□ -0.39
NUP58-209ENST00000476553 ZMYND10O75800 440 aa12.62□□□□□ -0.39
NUP58-209ENST00000476553 FSHRP23945 695 aa12.62□□□□□ -0.39
NUP58-209ENST00000476553 PARP9Q8IXQ6 854 aa12.6□□□□□ -0.39
NUP58-209ENST00000476553 TRMT44Q8IYL2 757 aaKnown RBP12.6□□□□□ -0.39
NUP58-209ENST00000476553 GPR161Q8N6U8 529 aaKnown RBP12.6□□□□□ -0.39
NUP58-209ENST00000476553 CABLES1Q8TDN4 633 aa12.6□□□□□ -0.39
NUP58-209ENST00000476553 TSEN34Q9BSV6 310 aaKnown RBP12.59□□□□□ -0.39
NUP58-209ENST00000476553 RASSF7Q02833 373 aa12.58□□□□□ -0.4
NUP58-209ENST00000476553 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.58□□□□□ -0.4
NUP58-209ENST00000476553 TMEM151AQ8N4L1 468 aa12.58□□□□□ -0.4
NUP58-209ENST00000476553 RNF225M0QZC1 329 aaPredicted RBP12.57□□□□□ -0.4
NUP58-209ENST00000476553 SH3BP5LQ7L8J4 393 aa12.57□□□□□ -0.4
NUP58-209ENST00000476553 RIC3Q7Z5B4 369 aa12.57□□□□□ -0.4
NUP58-209ENST00000476553 VSIG10Q8N0Z9 540 aa12.57□□□□□ -0.4
NUP58-209ENST00000476553 ARMC2Q8NEN0 867 aa12.56□□□□□ -0.4
NUP58-209ENST00000476553 CNTNAP3BQ96NU0 1288 aa12.56□□□□□ -0.4
NUP58-209ENST00000476553 CNTNAP3Q9BZ76 1288 aa12.56□□□□□ -0.4
NUP58-209ENST00000476553 EMILIN1Q9Y6C2 1016 aa12.56□□□□□ -0.4
NUP58-209ENST00000476553 GDF11O95390 407 aa12.55□□□□□ -0.4
NUP58-209ENST00000476553 PTSQ03393 145 aa12.55□□□□□ -0.4
NUP58-209ENST00000476553 NBPF14Q5TI25 921 aa12.55□□□□□ -0.4
NUP58-209ENST00000476553 CCDC116Q8IYX3 515 aa12.55□□□□□ -0.4
NUP58-209ENST00000476553 NANOS1Q8WY41 292 aaKnown RBP12.55□□□□□ -0.4
NUP58-209ENST00000476553 ADAMTS8Q9UP79 889 aa12.55□□□□□ -0.4
NUP58-209ENST00000476553 TTLL8A6PVC2 850 aa12.54□□□□□ -0.4
NUP58-209ENST00000476553 VASH1Q7L8A9 365 aaPredicted RBP12.54□□□□□ -0.4
NUP58-209ENST00000476553 ZNF385CQ66K41 422 aaPredicted RBP12.52□□□□□ -0.41
NUP58-209ENST00000476553 COL25A1Q9BXS0 654 aaPredicted RBP12.52□□□□□ -0.41
NUP58-209ENST00000476553 TUSC1Q2TAM9 212 aa12.51□□□□□ -0.41
NUP58-209ENST00000476553 ZC3H15Q8WU90 426 aaKnown RBP12.51□□□□□ -0.41
NUP58-209ENST00000476553 QPCTQ16769 361 aa12.5□□□□□ -0.41
NUP58-209ENST00000476553 CSPP1Q1MSJ5 1256 aa12.5□□□□□ -0.41
NUP58-209ENST00000476553 RNFT1Q5M7Z0 435 aa12.5□□□□□ -0.41
NUP58-209ENST00000476553 LIMD1Q9UGP4 676 aa12.5□□□□□ -0.41
NUP58-209ENST00000476553 SPINT1O43278 529 aa12.49□□□□□ -0.41
NUP58-209ENST00000476553 Q6ZVU0 165 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms