RNA–Protein interactions for RNA: ENST00000476104.1

SLC48A1-204, Transcript of solute carrier family 48 member 1, humanhuman

TSL 4

Gene SLC48A1, Length 567 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-204ENST00000476104 CCDC125Q86Z20 511 aa20.39■□□□□ 0.85
SLC48A1-204ENST00000476104 SIN3AQ96ST3 1273 aa20.39■□□□□ 0.85
SLC48A1-204ENST00000476104 SRPK2P78362 688 aaKnown RBP20.38■□□□□ 0.85
SLC48A1-204ENST00000476104 BTG4Q9NY30 223 aa20.38■□□□□ 0.85
SLC48A1-204ENST00000476104 SEPT12Q8IYM1 358 aa20.37■□□□□ 0.85
SLC48A1-204ENST00000476104 ACEP12821 1306 aa20.36■□□□□ 0.85
SLC48A1-204ENST00000476104 A0A0G2JS52 829 aa20.36■□□□□ 0.85
SLC48A1-204ENST00000476104 PLEKHG3A1L390 1219 aa20.36■□□□□ 0.85
SLC48A1-204ENST00000476104 MYT1Q01538 1121 aa20.36■□□□□ 0.85
SLC48A1-204ENST00000476104 NBPF8Q3BBV2 869 aa20.36■□□□□ 0.85
SLC48A1-204ENST00000476104 PRDM11Q9NQV5 511 aa20.36■□□□□ 0.85
SLC48A1-204ENST00000476104 POLR3AO14802 1390 aaPredicted RBP20.34■□□□□ 0.85
SLC48A1-204ENST00000476104 ONECUT3O60422 494 aaPredicted RBP20.33■□□□□ 0.85
SLC48A1-204ENST00000476104 NUTM2GQ5VZR2 741 aa20.33■□□□□ 0.85
SLC48A1-204ENST00000476104 COL14A1Q05707 1796 aaKnown RBP20.33■□□□□ 0.84
SLC48A1-204ENST00000476104 CABP2Q9NPB3 220 aa20.32■□□□□ 0.84
SLC48A1-204ENST00000476104 KRT27Q7Z3Y8 459 aa20.31■□□□□ 0.84
SLC48A1-204ENST00000476104 ABTB2Q8N961 1025 aa20.31■□□□□ 0.84
SLC48A1-204ENST00000476104 TOPAZ1Q8N9V7 1692 aa20.31■□□□□ 0.84
SLC48A1-204ENST00000476104 PPIP5K1Q6PFW1 1433 aa20.3■□□□□ 0.84
SLC48A1-204ENST00000476104 SF3B2Q13435 895 aaKnown RBP20.3■□□□□ 0.84
SLC48A1-204ENST00000476104 FAM98CQ17RN3 349 aaKnown RBP20.3■□□□□ 0.84
SLC48A1-204ENST00000476104 ROCK2O75116 1388 aaKnown RBP20.3■□□□□ 0.84
SLC48A1-204ENST00000476104 ZC3H6P61129 1189 aaKnown RBP20.29■□□□□ 0.84
SLC48A1-204ENST00000476104 KIAA0232Q92628 1395 aa20.29■□□□□ 0.84
SLC48A1-204ENST00000476104 QRICH2Q9H0J4 1663 aa20.29■□□□□ 0.84
SLC48A1-204ENST00000476104 BLMP54132 1417 aaPredicted RBP20.28■□□□□ 0.84
SLC48A1-204ENST00000476104 BRWD3Q6RI45 1802 aa20.28■□□□□ 0.84
SLC48A1-204ENST00000476104 ZRANB1Q9UGI0 708 aa20.28■□□□□ 0.84
SLC48A1-204ENST00000476104 EVC2Q86UK5 1308 aa20.27■□□□□ 0.84
SLC48A1-204ENST00000476104 NRAPQ86VF7 1730 aa20.27■□□□□ 0.84
SLC48A1-204ENST00000476104 CRYBG1Q9Y4K1 1723 aa20.27■□□□□ 0.84
SLC48A1-204ENST00000476104 CHRNA2Q15822 529 aa20.27■□□□□ 0.84
SLC48A1-204ENST00000476104 NLRP13Q86W25 1043 aa20.27■□□□□ 0.84
SLC48A1-204ENST00000476104 SPATA31A5Q5VU36 1347 aa20.27■□□□□ 0.83
SLC48A1-204ENST00000476104 SPATA31A7Q8IWB4 1347 aa20.27■□□□□ 0.83
SLC48A1-204ENST00000476104 STRN4Q9NRL3 753 aa20.26■□□□□ 0.83
SLC48A1-204ENST00000476104 CABP1Q9NZU7 370 aa20.26■□□□□ 0.83
SLC48A1-204ENST00000476104 BRD4O60885 1362 aaPredicted RBP20.25■□□□□ 0.83
SLC48A1-204ENST00000476104 TRPM1Q7Z4N2 1603 aa20.25■□□□□ 0.83
SLC48A1-204ENST00000476104 EP400Q96L91 3159 aa20.24■□□□□ 0.83
SLC48A1-204ENST00000476104 EVA1CP58658 441 aa20.24■□□□□ 0.83
SLC48A1-204ENST00000476104 PHRF1Q9P1Y6 1649 aaKnown RBP20.24■□□□□ 0.83
SLC48A1-204ENST00000476104 USP19O94966 1318 aa20.21■□□□□ 0.83
SLC48A1-204ENST00000476104 GCP02774 474 aa20.2■□□□□ 0.82
SLC48A1-204ENST00000476104 NLRP6P59044 892 aa20.2■□□□□ 0.82
SLC48A1-204ENST00000476104 DEFB132Q7Z7B7 95 aa20.2■□□□□ 0.82
SLC48A1-204ENST00000476104 SPATA31A1Q5TZJ5 1347 aa20.2■□□□□ 0.82
SLC48A1-204ENST00000476104 TONSLQ96HA7 1378 aa20.2■□□□□ 0.82
SLC48A1-204ENST00000476104 USP6P35125 1406 aa20.19■□□□□ 0.82
SLC48A1-204ENST00000476104 USP35Q9P2H5 1018 aa20.19■□□□□ 0.82
SLC48A1-204ENST00000476104 CPDO75976 1380 aa20.19■□□□□ 0.82
SLC48A1-204ENST00000476104 CARD11Q9BXL7 1154 aa20.18■□□□□ 0.82
SLC48A1-204ENST00000476104 NRKQ7Z2Y5 1582 aa20.17■□□□□ 0.82
SLC48A1-204ENST00000476104 ZBTB7CA1YPR0 619 aa20.17■□□□□ 0.82
SLC48A1-204ENST00000476104 ZNF692Q9BU19 519 aaPredicted RBP20.17■□□□□ 0.82
SLC48A1-204ENST00000476104 BAG6P46379 1132 aa20.16■□□□□ 0.82
SLC48A1-204ENST00000476104 FAM182BQ5T319 152 aa20.15■□□□□ 0.82
SLC48A1-204ENST00000476104 SSH2Q76I76 1423 aa20.15■□□□□ 0.82
SLC48A1-204ENST00000476104 TRIM26Q12899 539 aaPredicted RBP20.14■□□□□ 0.81
SLC48A1-204ENST00000476104 LARP1Q6PKG0 1096 aaKnown RBP20.14■□□□□ 0.81
SLC48A1-204ENST00000476104 CAMTA1Q9Y6Y1 1673 aa20.13■□□□□ 0.81
SLC48A1-204ENST00000476104 BARGINQ6ZT62 677 aa20.13■□□□□ 0.81
SLC48A1-204ENST00000476104 TCP11L2Q8N4U5 519 aa20.13■□□□□ 0.81
SLC48A1-204ENST00000476104 THSD7AQ9UPZ6 1657 aa20.13■□□□□ 0.81
SLC48A1-204ENST00000476104 PDE3BQ13370 1112 aa20.11■□□□□ 0.81
SLC48A1-204ENST00000476104 FAM196AQ6ZSG2 479 aa20.11■□□□□ 0.81
SLC48A1-204ENST00000476104 SBNO2Q9Y2G9 1366 aa20.1■□□□□ 0.81
SLC48A1-204ENST00000476104 TTC21BQ7Z4L5 1316 aa20.1■□□□□ 0.81
SLC48A1-204ENST00000476104 KTN1Q86UP2 1357 aaKnown RBP20.09■□□□□ 0.81
SLC48A1-204ENST00000476104 TTC21AQ8NDW8 1320 aa20.09■□□□□ 0.81
SLC48A1-204ENST00000476104 KCNH5Q8NCM2 988 aa20.09■□□□□ 0.81
SLC48A1-204ENST00000476104 THRAP3Q9Y2W1 955 aaKnown RBP20.09■□□□□ 0.81
SLC48A1-204ENST00000476104 LMO7Q8WWI1 1683 aa20.09■□□□□ 0.81
SLC48A1-204ENST00000476104 AATKQ6ZMQ8 1374 aa20.08■□□□□ 0.81
SLC48A1-204ENST00000476104 SLIT3O75094 1523 aa20.07■□□□□ 0.8
SLC48A1-204ENST00000476104 COL5A2P05997 1499 aaPredicted RBP20.07■□□□□ 0.8
SLC48A1-204ENST00000476104 TMC1Q8TDI8 760 aa20.07■□□□□ 0.8
SLC48A1-204ENST00000476104 RGPD1P0DJD0 1748 aa20.07■□□□□ 0.8
SLC48A1-204ENST00000476104 SOX12O15370 315 aa20.06■□□□□ 0.8
SLC48A1-204ENST00000476104 CRB1P82279 1406 aa20.06■□□□□ 0.8
SLC48A1-204ENST00000476104 EN1Q05925 392 aaPredicted RBP20.06■□□□□ 0.8
SLC48A1-204ENST00000476104 CPSF1Q10570 1443 aaKnown RBP20.06■□□□□ 0.8
SLC48A1-204ENST00000476104 PIK3C2AO00443 1686 aa20.06■□□□□ 0.8
SLC48A1-204ENST00000476104 TRIM37O94972 964 aa20.05■□□□□ 0.8
SLC48A1-204ENST00000476104 TOM1L2Q6ZVM7 507 aa20.05■□□□□ 0.8
SLC48A1-204ENST00000476104 AKAP12Q02952 1782 aa20.05■□□□□ 0.8
SLC48A1-204ENST00000476104 HDGFL2Q7Z4V5 671 aaPredicted RBP20.04■□□□□ 0.8
SLC48A1-204ENST00000476104 ARHGEF25Q86VW2 580 aa20.03■□□□□ 0.8
SLC48A1-204ENST00000476104 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.03■□□□□ 0.8
SLC48A1-204ENST00000476104 C11orf95C9JLR9 678 aaPredicted RBP20.01■□□□□ 0.79
SLC48A1-204ENST00000476104 APBA3O96018 575 aa20.01■□□□□ 0.79
SLC48A1-204ENST00000476104 CSB-PGBD3P0DP91 1061 aa20.01■□□□□ 0.79
SLC48A1-204ENST00000476104 TERF2IPQ9NYB0 399 aa20.01■□□□□ 0.79
SLC48A1-204ENST00000476104 SLC24A1O60721 1099 aa20■□□□□ 0.79
SLC48A1-204ENST00000476104 SLC12A5Q9H2X9 1139 aa20■□□□□ 0.79
SLC48A1-204ENST00000476104 AXIN2Q9Y2T1 843 aa20■□□□□ 0.79
SLC48A1-204ENST00000476104 DISP2A7MBM2 1401 aa20■□□□□ 0.79
SLC48A1-204ENST00000476104 WDR17Q8IZU2 1322 aa20■□□□□ 0.79
SLC48A1-204ENST00000476104 PSDA5PKW4 1024 aaPredicted RBP19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms