RNA–Protein interactions for RNA: ENST00000476034.5

PDE6B-209, Transcript of phosphodiesterase 6B, humanhuman

TSL 1 (best)

Gene PDE6B, Length 1,012 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-209ENST00000476034 ZNF772Q68DY9 489 aaPredicted RBP27.1■■□□□ 1.93
PDE6B-209ENST00000476034 PUS7Q96PZ0 661 aaKnown RBP27.1■■□□□ 1.93
PDE6B-209ENST00000476034 AFF2P51816 1311 aa27.1■■□□□ 1.93
PDE6B-209ENST00000476034 USP6P35125 1406 aa27.09■■□□□ 1.93
PDE6B-209ENST00000476034 HAP1P54257 671 aaPredicted RBP27.07■■□□□ 1.92
PDE6B-209ENST00000476034 NGLY1Q96IV0 654 aa27.07■■□□□ 1.92
PDE6B-209ENST00000476034 MON2Q7Z3U7 1717 aa27.07■■□□□ 1.92
PDE6B-209ENST00000476034 PHRF1Q9P1Y6 1649 aaKnown RBP27.06■■□□□ 1.92
PDE6B-209ENST00000476034 POTEAQ6S8J7 498 aa27.06■■□□□ 1.92
PDE6B-209ENST00000476034 CABLES1Q8TDN4 633 aa27.06■■□□□ 1.92
PDE6B-209ENST00000476034 NRKQ7Z2Y5 1582 aa27.05■■□□□ 1.92
PDE6B-209ENST00000476034 ZNF692Q9BU19 519 aaPredicted RBP27.04■■□□□ 1.92
PDE6B-209ENST00000476034 CPSF1Q10570 1443 aaKnown RBP27.04■■□□□ 1.92
PDE6B-209ENST00000476034 PLEKHG5O94827 1062 aa27.03■■□□□ 1.92
PDE6B-209ENST00000476034 TMF1P82094 1093 aa27.03■■□□□ 1.92
PDE6B-209ENST00000476034 SSH2Q76I76 1423 aa27.02■■□□□ 1.92
PDE6B-209ENST00000476034 NINLQ9Y2I6 1382 aa27.02■■□□□ 1.92
PDE6B-209ENST00000476034 PLCH1Q4KWH8 1693 aa27.01■■□□□ 1.92
PDE6B-209ENST00000476034 FNBP4Q8N3X1 1017 aaPredicted RBP27.01■■□□□ 1.91
PDE6B-209ENST00000476034 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.01■■□□□ 1.91
PDE6B-209ENST00000476034 CD163L1Q9NR16 1453 aa27■■□□□ 1.91
PDE6B-209ENST00000476034 ABTB2Q8N961 1025 aa27■■□□□ 1.91
PDE6B-209ENST00000476034 TMC1Q8TDI8 760 aa27■■□□□ 1.91
PDE6B-209ENST00000476034 PIK3C2AO00443 1686 aa27■■□□□ 1.91
PDE6B-209ENST00000476034 NWD2Q9ULI1 1742 aa26.99■■□□□ 1.91
PDE6B-209ENST00000476034 KTN1Q86UP2 1357 aaKnown RBP26.99■■□□□ 1.91
PDE6B-209ENST00000476034 USP21Q9UK80 565 aa26.98■■□□□ 1.91
PDE6B-209ENST00000476034 SLIT2O94813 1529 aa26.97■■□□□ 1.91
PDE6B-209ENST00000476034 EIF4G2P78344 907 aaKnown RBP eCLIP26.97■■□□□ 1.91
PDE6B-209ENST00000476034 CDCA8Q53HL2 280 aa26.97■■□□□ 1.91
PDE6B-209ENST00000476034 NUTM2GQ5VZR2 741 aa26.97■■□□□ 1.91
PDE6B-209ENST00000476034 COL14A1Q05707 1796 aaKnown RBP26.97■■□□□ 1.91
PDE6B-209ENST00000476034 SLC12A5Q9H2X9 1139 aa26.96■■□□□ 1.91
PDE6B-209ENST00000476034 BCL9LQ86UU0 1499 aa26.95■■□□□ 1.91
PDE6B-209ENST00000476034 HDGFL2Q7Z4V5 671 aaPredicted RBP26.95■■□□□ 1.9
PDE6B-209ENST00000476034 USP19O94966 1318 aa26.94■■□□□ 1.9
PDE6B-209ENST00000476034 TTC21BQ7Z4L5 1316 aa26.94■■□□□ 1.9
PDE6B-209ENST00000476034 TTC21AQ8NDW8 1320 aa26.94■■□□□ 1.9
PDE6B-209ENST00000476034 NLRP13Q86W25 1043 aa26.94■■□□□ 1.9
PDE6B-209ENST00000476034 TERF2IPQ9NYB0 399 aa26.94■■□□□ 1.9
PDE6B-209ENST00000476034 QTRT2Q9H974 415 aaKnown RBP26.93■■□□□ 1.9
PDE6B-209ENST00000476034 A0A1W2PP64 1363 aa26.93■■□□□ 1.9
PDE6B-209ENST00000476034 ATRNO75882 1429 aa26.92■■□□□ 1.9
PDE6B-209ENST00000476034 SLIT3O75094 1523 aa26.91■■□□□ 1.9
PDE6B-209ENST00000476034 RXRBP28702 533 aa26.91■■□□□ 1.9
PDE6B-209ENST00000476034 TRPC5Q9UL62 973 aaPredicted RBP26.91■■□□□ 1.9
PDE6B-209ENST00000476034 MYOM1P52179 1685 aa26.91■■□□□ 1.9
PDE6B-209ENST00000476034 EDC4Q6P2E9 1401 aaKnown RBP26.9■■□□□ 1.9
PDE6B-209ENST00000476034 USP54Q70EL1 1684 aa26.9■■□□□ 1.9
PDE6B-209ENST00000476034 HSPA5P11021 654 aaKnown RBP26.9■■□□□ 1.9
PDE6B-209ENST00000476034 NRAPQ86VF7 1730 aa26.9■■□□□ 1.9
PDE6B-209ENST00000476034 CDK12Q9NYV4 1490 aaPredicted RBP26.89■■□□□ 1.9
PDE6B-209ENST00000476034 FAM83GA6ND36 823 aa26.89■■□□□ 1.9
PDE6B-209ENST00000476034 NLRP6P59044 892 aa26.89■■□□□ 1.9
PDE6B-209ENST00000476034 RBM6P78332 1123 aaKnown RBP26.88■■□□□ 1.89
PDE6B-209ENST00000476034 UNC5CLQ8IV45 518 aa26.88■■□□□ 1.89
PDE6B-209ENST00000476034 ANKRD36BQ8N2N9 1353 aa26.87■■□□□ 1.89
PDE6B-209ENST00000476034 KIAA0232Q92628 1395 aa26.87■■□□□ 1.89
PDE6B-209ENST00000476034 PRDM11Q9NQV5 511 aa26.87■■□□□ 1.89
PDE6B-209ENST00000476034 CPDO75976 1380 aa26.85■■□□□ 1.89
PDE6B-209ENST00000476034 SOCS7O14512 581 aa26.85■■□□□ 1.89
PDE6B-209ENST00000476034 GCP02774 474 aa26.84■■□□□ 1.89
PDE6B-209ENST00000476034 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.84■■□□□ 1.89
PDE6B-209ENST00000476034 ZC3H6P61129 1189 aaKnown RBP26.83■■□□□ 1.89
PDE6B-209ENST00000476034 BTG4Q9NY30 223 aa26.82■■□□□ 1.88
PDE6B-209ENST00000476034 LMO7Q8WWI1 1683 aa26.82■■□□□ 1.88
PDE6B-209ENST00000476034 USP31Q70CQ4 1352 aa26.82■■□□□ 1.88
PDE6B-209ENST00000476034 GLI3P10071 1580 aa26.8■■□□□ 1.88
PDE6B-209ENST00000476034 RGS12O14924 1447 aa26.8■■□□□ 1.88
PDE6B-209ENST00000476034 CHRNA2Q15822 529 aa26.79■■□□□ 1.88
PDE6B-209ENST00000476034 VPS72Q15906 364 aa26.79■■□□□ 1.88
PDE6B-209ENST00000476034 NME9Q86XW9 330 aa26.79■■□□□ 1.88
PDE6B-209ENST00000476034 GJD4Q96KN9 370 aaPredicted RBP26.79■■□□□ 1.88
PDE6B-209ENST00000476034 KCNH5Q8NCM2 988 aa26.78■■□□□ 1.88
PDE6B-209ENST00000476034 NFAT5O94916 1531 aa26.78■■□□□ 1.88
PDE6B-209ENST00000476034 OVOS2A0A0J9YW53 1432 aa26.75■■□□□ 1.87
PDE6B-209ENST00000476034 OVOS2Q6IE36 1432 aa26.75■■□□□ 1.87
PDE6B-209ENST00000476034 KIF20BQ96Q89 1820 aa26.75■■□□□ 1.87
PDE6B-209ENST00000476034 CAMTA1Q9Y6Y1 1673 aa26.74■■□□□ 1.87
PDE6B-209ENST00000476034 ZRANB1Q9UGI0 708 aa26.74■■□□□ 1.87
PDE6B-209ENST00000476034 CCDC9Q9Y3X0 531 aaKnown RBP26.73■■□□□ 1.87
PDE6B-209ENST00000476034 COL18A1P39060 1754 aa26.73■■□□□ 1.87
PDE6B-209ENST00000476034 AATKQ6ZMQ8 1374 aa26.72■■□□□ 1.87
PDE6B-209ENST00000476034 POLR3GLQ9BT43 218 aa26.72■■□□□ 1.87
PDE6B-209ENST00000476034 LTN1O94822 1766 aa26.71■■□□□ 1.87
PDE6B-209ENST00000476034 ABCC6O95255 1503 aa26.71■■□□□ 1.87
PDE6B-209ENST00000476034 SOX12O15370 315 aa26.7■■□□□ 1.86
PDE6B-209ENST00000476034 ZBTB7CA1YPR0 619 aa26.69■■□□□ 1.86
PDE6B-209ENST00000476034 ARHGEF25Q86VW2 580 aa26.69■■□□□ 1.86
PDE6B-209ENST00000476034 COL5A2P05997 1499 aaPredicted RBP26.68■■□□□ 1.86
PDE6B-209ENST00000476034 NSD3Q9BZ95 1437 aa26.68■■□□□ 1.86
PDE6B-209ENST00000476034 SPATA31A5Q5VU36 1347 aa26.67■■□□□ 1.86
PDE6B-209ENST00000476034 SPATA31A7Q8IWB4 1347 aa26.67■■□□□ 1.86
PDE6B-209ENST00000476034 COG3Q96JB2 828 aa26.67■■□□□ 1.86
PDE6B-209ENST00000476034 STRN4Q9NRL3 753 aa26.67■■□□□ 1.86
PDE6B-209ENST00000476034 RGPD5Q99666 1765 aa26.66■■□□□ 1.86
PDE6B-209ENST00000476034 C11orf95C9JLR9 678 aaPredicted RBP26.66■■□□□ 1.86
PDE6B-209ENST00000476034 EVA1CP58658 441 aa26.66■■□□□ 1.86
PDE6B-209ENST00000476034 CARD14Q9BXL6 1004 aa26.66■■□□□ 1.86
PDE6B-209ENST00000476034 FYB1O15117 783 aa26.64■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms