RNA–Protein interactions for RNA: ENST00000475997.6

HNRNPU-208, Transcript of heterogeneous nuclear ribonucleoprotein U, human

TSL 5

Gene HNRNPU, Length 5,290 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPU-208	ENST00000475997	NCBP3	Q53F19	620 aa	Known RBP	7.42	□□□□□ -1.22
HNRNPU-208	ENST00000475997	ADGB	Q8N7X0	1667 aa		7.42	□□□□□ -1.22
HNRNPU-208	ENST00000475997		A0A0G2JS52	829 aa		7.42	□□□□□ -1.22
HNRNPU-208	ENST00000475997	ZNF592	Q92610	1267 aa		7.42	□□□□□ -1.22
HNRNPU-208	ENST00000475997	PRM3	Q9NNZ6	103 aa		7.42	□□□□□ -1.22
HNRNPU-208	ENST00000475997	PLCH2	O75038	1416 aa		7.42	□□□□□ -1.22
HNRNPU-208	ENST00000475997	RAPGEF3	O95398	923 aa		7.42	□□□□□ -1.22
HNRNPU-208	ENST00000475997	HOMER1	Q86YM7	354 aa		7.42	□□□□□ -1.22
HNRNPU-208	ENST00000475997	DMRT2	Q9Y5R5	561 aa		7.42	□□□□□ -1.22
HNRNPU-208	ENST00000475997	MVP	Q14764	893 aa	Known RBP	7.41	□□□□□ -1.22
HNRNPU-208	ENST00000475997	TSPYL1	Q9H0U9	437 aa		7.41	□□□□□ -1.22
HNRNPU-208	ENST00000475997	NOB1	Q9ULX3	412 aa	Known RBP	7.41	□□□□□ -1.22
HNRNPU-208	ENST00000475997	DUOX2	Q9NRD8	1548 aa		7.41	□□□□□ -1.22
HNRNPU-208	ENST00000475997	GPATCH3	Q96I76	525 aa		7.41	□□□□□ -1.22
HNRNPU-208	ENST00000475997	PRAM1	Q96QH2	718 aa		7.41	□□□□□ -1.22
HNRNPU-208	ENST00000475997	ASXL1	Q8IXJ9	1541 aa		7.41	□□□□□ -1.22
HNRNPU-208	ENST00000475997	LEKR1	Q6ZMV7	388 aa		7.41	□□□□□ -1.22
HNRNPU-208	ENST00000475997	ANO8	Q9HCE9	1232 aa	Predicted RBP	7.41	□□□□□ -1.22
HNRNPU-208	ENST00000475997	CHMP5	Q9NZZ3	219 aa		7.41	□□□□□ -1.22
HNRNPU-208	ENST00000475997	TNN	Q9UQP3	1299 aa		7.41	□□□□□ -1.22
HNRNPU-208	ENST00000475997	RASSF8	Q8NHQ8	419 aa		7.4	□□□□□ -1.22
HNRNPU-208	ENST00000475997	PCDHB15	Q9Y5E8	787 aa		7.4	□□□□□ -1.22
HNRNPU-208	ENST00000475997	TPD52L1	Q16890	204 aa	Predicted RBP	7.4	□□□□□ -1.22
HNRNPU-208	ENST00000475997	TAF7L	Q5H9L4	462 aa		7.4	□□□□□ -1.22
HNRNPU-208	ENST00000475997	ANKRD20A12P	Q8NF67	263 aa		7.4	□□□□□ -1.22
HNRNPU-208	ENST00000475997	CCDC39	Q9UFE4	941 aa		7.4	□□□□□ -1.22
HNRNPU-208	ENST00000475997	TMPO	P42166	694 aa	Known RBP	7.4	□□□□□ -1.23
HNRNPU-208	ENST00000475997	ATF7IP	Q6VMQ6	1270 aa		7.4	□□□□□ -1.23
HNRNPU-208	ENST00000475997	DEF6	Q9H4E7	631 aa		7.4	□□□□□ -1.23
HNRNPU-208	ENST00000475997	PRKAR2B	P31323	418 aa		7.4	□□□□□ -1.23
HNRNPU-208	ENST00000475997	KDM2B	Q8NHM5	1336 aa		7.39	□□□□□ -1.23
HNRNPU-208	ENST00000475997	NINL	Q9Y2I6	1382 aa		7.39	□□□□□ -1.23
HNRNPU-208	ENST00000475997	SSH1	Q8WYL5	1049 aa		7.39	□□□□□ -1.23
HNRNPU-208	ENST00000475997	CABP1	Q9NZU7	370 aa		7.39	□□□□□ -1.23
HNRNPU-208	ENST00000475997	NOS1	P29475	1434 aa		7.39	□□□□□ -1.23
HNRNPU-208	ENST00000475997	NEXN	Q0ZGT2	675 aa		7.39	□□□□□ -1.23
HNRNPU-208	ENST00000475997	SLC4A10	Q6U841	1118 aa		7.39	□□□□□ -1.23
HNRNPU-208	ENST00000475997	SEC24B	O95487	1268 aa		7.39	□□□□□ -1.23
HNRNPU-208	ENST00000475997	OSCAR	Q8IYS5	282 aa		7.39	□□□□□ -1.23
HNRNPU-208	ENST00000475997	C1orf115	Q9H7X2	142 aa		7.39	□□□□□ -1.23
HNRNPU-208	ENST00000475997	BLM	P54132	1417 aa	Predicted RBP	7.39	□□□□□ -1.23
HNRNPU-208	ENST00000475997	RLBP1	P12271	317 aa		7.38	□□□□□ -1.23
HNRNPU-208	ENST00000475997	RTF1	Q92541	710 aa	Known RBP	7.38	□□□□□ -1.23
HNRNPU-208	ENST00000475997	C14orf93	Q9H972	538 aa	Known RBP	7.38	□□□□□ -1.23
HNRNPU-208	ENST00000475997	ISY1	Q9ULR0	285 aa	Known RBP	7.38	□□□□□ -1.23
HNRNPU-208	ENST00000475997	R3HCC1	Q9Y3T6	440 aa	Known RBP	7.38	□□□□□ -1.23
HNRNPU-208	ENST00000475997	PLA2R1	Q13018	1463 aa		7.38	□□□□□ -1.23
HNRNPU-208	ENST00000475997	ADGRL1	O94910	1474 aa		7.38	□□□□□ -1.23
HNRNPU-208	ENST00000475997	GOLGA6L7	A0A1B0GV03	622 aa		7.38	□□□□□ -1.23
HNRNPU-208	ENST00000475997	NEFH	P12036	1026 aa		7.38	□□□□□ -1.23
HNRNPU-208	ENST00000475997	COG3	Q96JB2	828 aa		7.38	□□□□□ -1.23
HNRNPU-208	ENST00000475997	INCENP	Q9NQS7	918 aa		7.38	□□□□□ -1.23
HNRNPU-208	ENST00000475997	LMOD3	Q0VAK6	560 aa		7.38	□□□□□ -1.23
HNRNPU-208	ENST00000475997	TMEM57	Q8N5G2	664 aa		7.38	□□□□□ -1.23
HNRNPU-208	ENST00000475997	PIK3C2G	O75747	1445 aa		7.38	□□□□□ -1.23
HNRNPU-208	ENST00000475997	ZMYM4	Q5VZL5	1548 aa		7.38	□□□□□ -1.23
HNRNPU-208	ENST00000475997	MAGI2	Q86UL8	1455 aa		7.38	□□□□□ -1.23
HNRNPU-208	ENST00000475997	HDGF	P51858	240 aa	Known RBP	7.37	□□□□□ -1.23
HNRNPU-208	ENST00000475997	ZRSR2	Q15696	482 aa	Known RBP	7.37	□□□□□ -1.23
HNRNPU-208	ENST00000475997	HSP90AB3P	Q58FF7	597 aa		7.37	□□□□□ -1.23
HNRNPU-208	ENST00000475997	FANCA	O15360	1455 aa		7.37	□□□□□ -1.23
HNRNPU-208	ENST00000475997	RPGRIP1L	Q68CZ1	1315 aa		7.37	□□□□□ -1.23
HNRNPU-208	ENST00000475997	CDK19	Q9BWU1	502 aa		7.37	□□□□□ -1.23
HNRNPU-208	ENST00000475997	GNAI1	P63096	354 aa		7.37	□□□□□ -1.23
HNRNPU-208	ENST00000475997	CYB5RL	Q6IPT4	315 aa		7.37	□□□□□ -1.23
HNRNPU-208	ENST00000475997	PES1	O00541	588 aa	Known RBP	7.37	□□□□□ -1.23
HNRNPU-208	ENST00000475997	NUCB2	P80303	420 aa		7.37	□□□□□ -1.23
HNRNPU-208	ENST00000475997	IDI1	Q13907	227 aa		7.37	□□□□□ -1.23
HNRNPU-208	ENST00000475997	THUMPD2	Q9BTF0	503 aa	Known RBP	7.37	□□□□□ -1.23
HNRNPU-208	ENST00000475997	IFT57	Q9NWB7	429 aa		7.37	□□□□□ -1.23
HNRNPU-208	ENST00000475997	ABCA8	O94911	1581 aa		7.37	□□□□□ -1.23
HNRNPU-208	ENST00000475997	EIF2AK4	Q9P2K8	1649 aa	Known RBP	7.37	□□□□□ -1.23
HNRNPU-208	ENST00000475997	DHX8	Q14562	1220 aa	Known RBP	7.36	□□□□□ -1.23
HNRNPU-208	ENST00000475997	CREBRF	Q8IUR6	639 aa		7.36	□□□□□ -1.23
HNRNPU-208	ENST00000475997	TBC1D2	Q9BYX2	928 aa		7.36	□□□□□ -1.23
HNRNPU-208	ENST00000475997	TRAK2	O60296	914 aa		7.36	□□□□□ -1.23
HNRNPU-208	ENST00000475997	CT47B1	P0C2W7	299 aa	Predicted RBP	7.36	□□□□□ -1.23
HNRNPU-208	ENST00000475997	TRIM27	P14373	513 aa		7.36	□□□□□ -1.23
HNRNPU-208	ENST00000475997	PDE4C	Q08493	712 aa		7.36	□□□□□ -1.23
HNRNPU-208	ENST00000475997	CAVIN1	Q6NZI2	390 aa	Known RBP	7.36	□□□□□ -1.23
HNRNPU-208	ENST00000475997	HOOK1	Q9UJC3	728 aa	Known RBP	7.36	□□□□□ -1.23
HNRNPU-208	ENST00000475997	ARHGEF5	Q12774	1597 aa		7.36	□□□□□ -1.23
HNRNPU-208	ENST00000475997		H3BQV1	296 aa		7.36	□□□□□ -1.23
HNRNPU-208	ENST00000475997	CCP110	O43303	1012 aa		7.36	□□□□□ -1.23
HNRNPU-208	ENST00000475997	KIAA0754	O94854	1291 aa		7.36	□□□□□ -1.23
HNRNPU-208	ENST00000475997	IFFO2	Q5TF58	517 aa		7.36	□□□□□ -1.23
HNRNPU-208	ENST00000475997	FBLN1	P23142	703 aa		7.36	□□□□□ -1.23
HNRNPU-208	ENST00000475997	CAGE1	Q8TC20	777 aa		7.36	□□□□□ -1.23
HNRNPU-208	ENST00000475997	DYDC1	Q8WWB3	177 aa		7.36	□□□□□ -1.23
HNRNPU-208	ENST00000475997	API5	Q9BZZ5	524 aa	Known RBP	7.36	□□□□□ -1.23
HNRNPU-208	ENST00000475997	SLC52A1	Q9NWF4	448 aa		7.36	□□□□□ -1.23
HNRNPU-208	ENST00000475997	POLR3A	O14802	1390 aa	Predicted RBP	7.35	□□□□□ -1.23
HNRNPU-208	ENST00000475997	CCDC173	Q0VFZ6	552 aa		7.35	□□□□□ -1.23
HNRNPU-208	ENST00000475997	MYO6	Q9UM54	1294 aa		7.35	□□□□□ -1.23
HNRNPU-208	ENST00000475997	INSR	P06213	1382 aa		7.35	□□□□□ -1.23
HNRNPU-208	ENST00000475997	SAMD9L	Q8IVG5	1584 aa		7.35	□□□□□ -1.23
HNRNPU-208	ENST00000475997	NPHP1	O15259	732 aa		7.35	□□□□□ -1.23
HNRNPU-208	ENST00000475997	PDCL2	Q8N4E4	241 aa		7.35	□□□□□ -1.23
HNRNPU-208	ENST00000475997	CCDC47	Q96A33	483 aa	Known RBP	7.35	□□□□□ -1.23
HNRNPU-208	ENST00000475997	CDC42BPA	Q5VT25	1732 aa		7.35	□□□□□ -1.23

Retrieved 100 of 20,778 RNA–protein pairs in 78 ms