RNA–Protein interactions for RNA: ENST00000475868.1

PKDCC-205, Transcript of protein kinase domain containing, cytoplasmic, humanhuman

TSL 2

Gene PKDCC, Length 725 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKDCC-205ENST00000475868 NGDNQ8NEJ9 315 aaKnown RBP17.82■□□□□ 0.44
PKDCC-205ENST00000475868 VPS72Q15906 364 aa17.81■□□□□ 0.44
PKDCC-205ENST00000475868 BLMP54132 1417 aaPredicted RBP17.81■□□□□ 0.44
PKDCC-205ENST00000475868 NRKQ7Z2Y5 1582 aa17.79■□□□□ 0.44
PKDCC-205ENST00000475868 DEFB132Q7Z7B7 95 aa17.79■□□□□ 0.44
PKDCC-205ENST00000475868 BTG4Q9NY30 223 aa17.79■□□□□ 0.44
PKDCC-205ENST00000475868 THSD7AQ9UPZ6 1657 aa17.79■□□□□ 0.44
PKDCC-205ENST00000475868 FAM98CQ17RN3 349 aaKnown RBP17.78■□□□□ 0.44
PKDCC-205ENST00000475868 NUTM2GQ5VZR2 741 aa17.78■□□□□ 0.44
PKDCC-205ENST00000475868 RGPD1P0DJD0 1748 aa17.78■□□□□ 0.44
PKDCC-205ENST00000475868 TNS1Q9HBL0 1735 aaKnown RBP17.78■□□□□ 0.44
PKDCC-205ENST00000475868 NUDT16Q96DE0 195 aaKnown RBP17.76■□□□□ 0.43
PKDCC-205ENST00000475868 ZRANB1Q9UGI0 708 aa17.76■□□□□ 0.43
PKDCC-205ENST00000475868 CHRNA2Q15822 529 aa17.75■□□□□ 0.43
PKDCC-205ENST00000475868 NBPF1Q3BBV0 1214 aa17.75■□□□□ 0.43
PKDCC-205ENST00000475868 FAM182BQ5T319 152 aa17.75■□□□□ 0.43
PKDCC-205ENST00000475868 KRT27Q7Z3Y8 459 aa17.75■□□□□ 0.43
PKDCC-205ENST00000475868 PRDM11Q9NQV5 511 aa17.75■□□□□ 0.43
PKDCC-205ENST00000475868 KIAA0232Q92628 1395 aa17.75■□□□□ 0.43
PKDCC-205ENST00000475868 TRIM26Q12899 539 aaPredicted RBP17.74■□□□□ 0.43
PKDCC-205ENST00000475868 CDK19Q9BWU1 502 aa17.74■□□□□ 0.43
PKDCC-205ENST00000475868 TRPM1Q7Z4N2 1603 aa17.73■□□□□ 0.43
PKDCC-205ENST00000475868 CCDC125Q86Z20 511 aa17.72■□□□□ 0.43
PKDCC-205ENST00000475868 SRCAPQ6ZRS2 3230 aa17.72■□□□□ 0.43
PKDCC-205ENST00000475868 HRCP23327 699 aa17.71■□□□□ 0.43
PKDCC-205ENST00000475868 ZC3H6P61129 1189 aaKnown RBP17.71■□□□□ 0.43
PKDCC-205ENST00000475868 SF3B2Q13435 895 aaKnown RBP17.71■□□□□ 0.43
PKDCC-205ENST00000475868 STRN4Q9NRL3 753 aa17.71■□□□□ 0.43
PKDCC-205ENST00000475868 ACEP12821 1306 aa17.71■□□□□ 0.42
PKDCC-205ENST00000475868 LMO7Q8WWI1 1683 aa17.71■□□□□ 0.42
PKDCC-205ENST00000475868 POLR3AO14802 1390 aaPredicted RBP17.7■□□□□ 0.42
PKDCC-205ENST00000475868 PPIP5K1Q6PFW1 1433 aa17.7■□□□□ 0.42
PKDCC-205ENST00000475868 SPATA31A5Q5VU36 1347 aa17.7■□□□□ 0.42
PKDCC-205ENST00000475868 SPATA31A7Q8IWB4 1347 aa17.7■□□□□ 0.42
PKDCC-205ENST00000475868 STAC3Q96MF2 364 aa17.69■□□□□ 0.42
PKDCC-205ENST00000475868 PCGF6Q9BYE7 350 aa17.69■□□□□ 0.42
PKDCC-205ENST00000475868 ONECUT3O60422 494 aaPredicted RBP17.68■□□□□ 0.42
PKDCC-205ENST00000475868 PIK3C2AO00443 1686 aa17.67■□□□□ 0.42
PKDCC-205ENST00000475868 SRPK2P78362 688 aaKnown RBP17.67■□□□□ 0.42
PKDCC-205ENST00000475868 CABP2Q9NPB3 220 aa17.67■□□□□ 0.42
PKDCC-205ENST00000475868 USP35Q9P2H5 1018 aa17.67■□□□□ 0.42
PKDCC-205ENST00000475868 CAMTA1Q9Y6Y1 1673 aa17.67■□□□□ 0.42
PKDCC-205ENST00000475868 CENPJQ9HC77 1338 aaPredicted RBP17.67■□□□□ 0.42
PKDCC-205ENST00000475868 PSDA5PKW4 1024 aaPredicted RBP17.66■□□□□ 0.42
PKDCC-205ENST00000475868 LRP5O75197 1615 aa17.65■□□□□ 0.42
PKDCC-205ENST00000475868 SSH2Q76I76 1423 aa17.65■□□□□ 0.42
PKDCC-205ENST00000475868 NBPF8Q3BBV2 869 aa17.65■□□□□ 0.42
PKDCC-205ENST00000475868 AKAP12Q02952 1782 aa17.65■□□□□ 0.42
PKDCC-205ENST00000475868 WNK3Q9BYP7 1800 aa17.65■□□□□ 0.42
PKDCC-205ENST00000475868 ZBTB7CA1YPR0 619 aa17.64■□□□□ 0.41
PKDCC-205ENST00000475868 CCDC61Q9Y6R9 512 aa17.64■□□□□ 0.41
PKDCC-205ENST00000475868 SPATA31A1Q5TZJ5 1347 aa17.64■□□□□ 0.41
PKDCC-205ENST00000475868 RGPD5Q99666 1765 aa17.63■□□□□ 0.41
PKDCC-205ENST00000475868 ABTB2Q8N961 1025 aa17.63■□□□□ 0.41
PKDCC-205ENST00000475868 SIN3AQ96ST3 1273 aa17.63■□□□□ 0.41
PKDCC-205ENST00000475868 BAG6P46379 1132 aa17.62■□□□□ 0.41
PKDCC-205ENST00000475868 L3MBTL2Q969R5 705 aa17.62■□□□□ 0.41
PKDCC-205ENST00000475868 EN1Q05925 392 aaPredicted RBP17.61■□□□□ 0.41
PKDCC-205ENST00000475868 USP19O94966 1318 aa17.61■□□□□ 0.41
PKDCC-205ENST00000475868 NUP188Q5SRE5 1749 aa17.61■□□□□ 0.41
PKDCC-205ENST00000475868 PLEKHG3A1L390 1219 aa17.6■□□□□ 0.41
PKDCC-205ENST00000475868 NEUROD1Q13562 356 aa17.6■□□□□ 0.41
PKDCC-205ENST00000475868 LARP1Q6PKG0 1096 aaKnown RBP17.6■□□□□ 0.41
PKDCC-205ENST00000475868 USP6P35125 1406 aa17.6■□□□□ 0.41
PKDCC-205ENST00000475868 LRRC37A3O60309 1634 aa17.6■□□□□ 0.41
PKDCC-205ENST00000475868 RREB1Q92766 1687 aa17.6■□□□□ 0.41
PKDCC-205ENST00000475868 PARP4Q9UKK3 1724 aaKnown RBP17.6■□□□□ 0.41
PKDCC-205ENST00000475868 SLIT3O75094 1523 aa17.59■□□□□ 0.41
PKDCC-205ENST00000475868 COL5A2P05997 1499 aaPredicted RBP17.59■□□□□ 0.41
PKDCC-205ENST00000475868 EVA1CP58658 441 aa17.58■□□□□ 0.4
PKDCC-205ENST00000475868 COL18A1P39060 1754 aa17.58■□□□□ 0.4
PKDCC-205ENST00000475868 ROCK2O75116 1388 aaKnown RBP17.57■□□□□ 0.4
PKDCC-205ENST00000475868 TRIM37O94972 964 aa17.57■□□□□ 0.4
PKDCC-205ENST00000475868 MON2Q7Z3U7 1717 aa17.57■□□□□ 0.4
PKDCC-205ENST00000475868 CPDO75976 1380 aa17.56■□□□□ 0.4
PKDCC-205ENST00000475868 CABP1Q9NZU7 370 aa17.56■□□□□ 0.4
PKDCC-205ENST00000475868 SBF2Q86WG5 1849 aa17.55■□□□□ 0.4
PKDCC-205ENST00000475868 DISP2A7MBM2 1401 aa17.55■□□□□ 0.4
PKDCC-205ENST00000475868 SOX12O15370 315 aa17.54■□□□□ 0.4
PKDCC-205ENST00000475868 GCP02774 474 aa17.54■□□□□ 0.4
PKDCC-205ENST00000475868 R3HDM1Q15032 1099 aaKnown RBP17.54■□□□□ 0.4
PKDCC-205ENST00000475868 EZH2Q15910 746 aaKnown RBP17.54■□□□□ 0.4
PKDCC-205ENST00000475868 PEAK1Q9H792 1746 aa17.54■□□□□ 0.4
PKDCC-205ENST00000475868 NLRP13Q86W25 1043 aa17.53■□□□□ 0.4
PKDCC-205ENST00000475868 NLRP6P59044 892 aa17.52■□□□□ 0.4
PKDCC-205ENST00000475868 EVC2Q86UK5 1308 aa17.51■□□□□ 0.39
PKDCC-205ENST00000475868 LTN1O94822 1766 aa17.51■□□□□ 0.39
PKDCC-205ENST00000475868 TCP11L2Q8N4U5 519 aa17.51■□□□□ 0.39
PKDCC-205ENST00000475868 CRB1P82279 1406 aa17.5■□□□□ 0.39
PKDCC-205ENST00000475868 PDE3BQ13370 1112 aa17.5■□□□□ 0.39
PKDCC-205ENST00000475868 CPSF1Q10570 1443 aaKnown RBP17.49■□□□□ 0.39
PKDCC-205ENST00000475868 NFAT5O94916 1531 aa17.49■□□□□ 0.39
PKDCC-205ENST00000475868 APBA3O96018 575 aa17.49■□□□□ 0.39
PKDCC-205ENST00000475868 FAM196AQ6ZSG2 479 aa17.49■□□□□ 0.39
PKDCC-205ENST00000475868 BARGINQ6ZT62 677 aa17.49■□□□□ 0.39
PKDCC-205ENST00000475868 BRD4O60885 1362 aaPredicted RBP17.46■□□□□ 0.39
PKDCC-205ENST00000475868 AATKQ6ZMQ8 1374 aa17.46■□□□□ 0.39
PKDCC-205ENST00000475868 CAMKK2Q96RR4 588 aa17.46■□□□□ 0.39
PKDCC-205ENST00000475868 TTC21BQ7Z4L5 1316 aa17.46■□□□□ 0.38
PKDCC-205ENST00000475868 USP54Q70EL1 1684 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms