RNA–Protein interactions for RNA: ENST00000475795.5

UBE4B-208, Transcript of ubiquitination factor E4B, humanhuman

TSL 5

Gene UBE4B, Length 871 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-208ENST00000475795 ARHGEF10O15013 1369 aa10.6□□□□□ -0.71
UBE4B-208ENST00000475795 NRAPQ86VF7 1730 aa10.59□□□□□ -0.71
UBE4B-208ENST00000475795 TULP4Q9NRJ4 1543 aa10.58□□□□□ -0.72
UBE4B-208ENST00000475795 ITSN1Q15811 1721 aa10.58□□□□□ -0.72
UBE4B-208ENST00000475795 EIF3AQ14152 1382 aaKnown RBP10.58□□□□□ -0.72
UBE4B-208ENST00000475795 HAP1P54257 671 aaPredicted RBP10.58□□□□□ -0.72
UBE4B-208ENST00000475795 CCDC125Q86Z20 511 aa10.58□□□□□ -0.72
UBE4B-208ENST00000475795 CABLES1Q8TDN4 633 aa10.58□□□□□ -0.72
UBE4B-208ENST00000475795 TRAK1Q9UPV9 953 aa10.58□□□□□ -0.72
UBE4B-208ENST00000475795 CRYBG1Q9Y4K1 1723 aa10.58□□□□□ -0.72
UBE4B-208ENST00000475795 PMFBP1Q8TBY8 1022 aa10.57□□□□□ -0.72
UBE4B-208ENST00000475795 DCAF11Q8TEB1 546 aa10.57□□□□□ -0.72
UBE4B-208ENST00000475795 STAC3Q96MF2 364 aa10.57□□□□□ -0.72
UBE4B-208ENST00000475795 HRCP23327 699 aa10.56□□□□□ -0.72
UBE4B-208ENST00000475795 VPS72Q15906 364 aa10.56□□□□□ -0.72
UBE4B-208ENST00000475795 LMOD2Q6P5Q4 547 aa10.56□□□□□ -0.72
UBE4B-208ENST00000475795 HIRIP3Q9BW71 556 aaPredicted RBP10.56□□□□□ -0.72
UBE4B-208ENST00000475795 KDM2AQ9Y2K7 1162 aa10.56□□□□□ -0.72
UBE4B-208ENST00000475795 COL14A1Q05707 1796 aaKnown RBP10.56□□□□□ -0.72
UBE4B-208ENST00000475795 MINK1Q8N4C8 1332 aaPredicted RBP10.56□□□□□ -0.72
UBE4B-208ENST00000475795 PRR36Q9H6K5 1346 aa10.56□□□□□ -0.72
UBE4B-208ENST00000475795 KIAA1210Q9ULL0 1709 aa10.55□□□□□ -0.72
UBE4B-208ENST00000475795 GPRASP1Q5JY77 1395 aa10.55□□□□□ -0.72
UBE4B-208ENST00000475795 BLMP54132 1417 aaPredicted RBP10.55□□□□□ -0.72
UBE4B-208ENST00000475795 FAM83GA6ND36 823 aa10.54□□□□□ -0.72
UBE4B-208ENST00000475795 WASLO00401 505 aaPredicted RBP10.54□□□□□ -0.72
UBE4B-208ENST00000475795 PLEKHG5O94827 1062 aa10.54□□□□□ -0.72
UBE4B-208ENST00000475795 TOPAZ1Q8N9V7 1692 aa10.53□□□□□ -0.72
UBE4B-208ENST00000475795 ONECUT3O60422 494 aaPredicted RBP10.53□□□□□ -0.72
UBE4B-208ENST00000475795 SEPT12Q8IYM1 358 aa10.53□□□□□ -0.72
UBE4B-208ENST00000475795 ZRANB1Q9UGI0 708 aa10.53□□□□□ -0.72
UBE4B-208ENST00000475795 ATP7BP35670 1465 aa10.53□□□□□ -0.72
UBE4B-208ENST00000475795 CCDC9Q9Y3X0 531 aaKnown RBP10.52□□□□□ -0.73
UBE4B-208ENST00000475795 PHRF1Q9P1Y6 1649 aaKnown RBP10.51□□□□□ -0.73
UBE4B-208ENST00000475795 MKRN4PQ13434 485 aaPredicted RBP10.51□□□□□ -0.73
UBE4B-208ENST00000475795 NGDNQ8NEJ9 315 aaKnown RBP10.51□□□□□ -0.73
UBE4B-208ENST00000475795 KRT27Q7Z3Y8 459 aa10.5□□□□□ -0.73
UBE4B-208ENST00000475795 BTG4Q9NY30 223 aa10.5□□□□□ -0.73
UBE4B-208ENST00000475795 THSD7AQ9UPZ6 1657 aa10.5□□□□□ -0.73
UBE4B-208ENST00000475795 RGPD1P0DJD0 1748 aa10.5□□□□□ -0.73
UBE4B-208ENST00000475795 PAK3O75914 559 aaPredicted RBP10.49□□□□□ -0.73
UBE4B-208ENST00000475795 SF3B2Q13435 895 aaKnown RBP10.49□□□□□ -0.73
UBE4B-208ENST00000475795 NUDT16Q96DE0 195 aaKnown RBP10.49□□□□□ -0.73
UBE4B-208ENST00000475795 SRCAPQ6ZRS2 3230 aa10.49□□□□□ -0.73
UBE4B-208ENST00000475795 FAM98CQ17RN3 349 aaKnown RBP10.48□□□□□ -0.73
UBE4B-208ENST00000475795 DEFB132Q7Z7B7 95 aa10.48□□□□□ -0.73
UBE4B-208ENST00000475795 CDK19Q9BWU1 502 aa10.48□□□□□ -0.73
UBE4B-208ENST00000475795 POLR3AO14802 1390 aaPredicted RBP10.48□□□□□ -0.73
UBE4B-208ENST00000475795 A0A0G2JS52 829 aa10.47□□□□□ -0.73
UBE4B-208ENST00000475795 MYT1Q01538 1121 aa10.47□□□□□ -0.73
UBE4B-208ENST00000475795 RBM42Q9BTD8 480 aaKnown RBP10.47□□□□□ -0.73
UBE4B-208ENST00000475795 PRDM11Q9NQV5 511 aa10.47□□□□□ -0.73
UBE4B-208ENST00000475795 SPATA31A5Q5VU36 1347 aa10.47□□□□□ -0.73
UBE4B-208ENST00000475795 SPATA31A7Q8IWB4 1347 aa10.47□□□□□ -0.73
UBE4B-208ENST00000475795 QRICH2Q9H0J4 1663 aa10.47□□□□□ -0.73
UBE4B-208ENST00000475795 TNS1Q9HBL0 1735 aaKnown RBP10.47□□□□□ -0.73
UBE4B-208ENST00000475795 KIAA0232Q92628 1395 aa10.46□□□□□ -0.74
UBE4B-208ENST00000475795 NRKQ7Z2Y5 1582 aa10.46□□□□□ -0.74
UBE4B-208ENST00000475795 LRP5O75197 1615 aa10.45□□□□□ -0.74
UBE4B-208ENST00000475795 ACEP12821 1306 aa10.45□□□□□ -0.74
UBE4B-208ENST00000475795 PLEKHG3A1L390 1219 aa10.45□□□□□ -0.74
UBE4B-208ENST00000475795 NBPF1Q3BBV0 1214 aa10.45□□□□□ -0.74
UBE4B-208ENST00000475795 CCDC61Q9Y6R9 512 aa10.45□□□□□ -0.74
UBE4B-208ENST00000475795 BAG6P46379 1132 aa10.44□□□□□ -0.74
UBE4B-208ENST00000475795 NBPF8Q3BBV2 869 aa10.44□□□□□ -0.74
UBE4B-208ENST00000475795 LMO7Q8WWI1 1683 aa10.44□□□□□ -0.74
UBE4B-208ENST00000475795 SPATA31A1Q5TZJ5 1347 aa10.43□□□□□ -0.74
UBE4B-208ENST00000475795 CHRNA2Q15822 529 aa10.43□□□□□ -0.74
UBE4B-208ENST00000475795 NUTM2GQ5VZR2 741 aa10.43□□□□□ -0.74
UBE4B-208ENST00000475795 DISP2A7MBM2 1401 aa10.42□□□□□ -0.74
UBE4B-208ENST00000475795 PPIP5K1Q6PFW1 1433 aa10.42□□□□□ -0.74
UBE4B-208ENST00000475795 USP19O94966 1318 aa10.42□□□□□ -0.74
UBE4B-208ENST00000475795 CENPJQ9HC77 1338 aaPredicted RBP10.42□□□□□ -0.74
UBE4B-208ENST00000475795 ZC3H6P61129 1189 aaKnown RBP10.42□□□□□ -0.74
UBE4B-208ENST00000475795 SSH2Q76I76 1423 aa10.41□□□□□ -0.74
UBE4B-208ENST00000475795 CPDO75976 1380 aa10.41□□□□□ -0.74
UBE4B-208ENST00000475795 CAMTA1Q9Y6Y1 1673 aa10.41□□□□□ -0.74
UBE4B-208ENST00000475795 TRPM1Q7Z4N2 1603 aa10.41□□□□□ -0.74
UBE4B-208ENST00000475795 FAM182BQ5T319 152 aa10.41□□□□□ -0.74
UBE4B-208ENST00000475795 ABTB2Q8N961 1025 aa10.41□□□□□ -0.74
UBE4B-208ENST00000475795 STRN4Q9NRL3 753 aa10.41□□□□□ -0.74
UBE4B-208ENST00000475795 SRPK2P78362 688 aaKnown RBP10.4□□□□□ -0.74
UBE4B-208ENST00000475795 BRD4O60885 1362 aaPredicted RBP10.39□□□□□ -0.75
UBE4B-208ENST00000475795 AKAP12Q02952 1782 aa10.39□□□□□ -0.75
UBE4B-208ENST00000475795 PARP4Q9UKK3 1724 aaKnown RBP10.39□□□□□ -0.75
UBE4B-208ENST00000475795 RREB1Q92766 1687 aa10.39□□□□□ -0.75
UBE4B-208ENST00000475795 EN1Q05925 392 aaPredicted RBP10.39□□□□□ -0.75
UBE4B-208ENST00000475795 BARGINQ6ZT62 677 aa10.39□□□□□ -0.75
UBE4B-208ENST00000475795 CABP2Q9NPB3 220 aa10.39□□□□□ -0.75
UBE4B-208ENST00000475795 SLIT3O75094 1523 aa10.38□□□□□ -0.75
UBE4B-208ENST00000475795 PIK3C2AO00443 1686 aa10.38□□□□□ -0.75
UBE4B-208ENST00000475795 PSDA5PKW4 1024 aaPredicted RBP10.38□□□□□ -0.75
UBE4B-208ENST00000475795 EVA1CP58658 441 aa10.38□□□□□ -0.75
UBE4B-208ENST00000475795 LARP1Q6PKG0 1096 aaKnown RBP10.38□□□□□ -0.75
UBE4B-208ENST00000475795 FAM196AQ6ZSG2 479 aa10.38□□□□□ -0.75
UBE4B-208ENST00000475795 NLRP13Q86W25 1043 aa10.38□□□□□ -0.75
UBE4B-208ENST00000475795 ZNF692Q9BU19 519 aaPredicted RBP10.38□□□□□ -0.75
UBE4B-208ENST00000475795 USP35Q9P2H5 1018 aa10.38□□□□□ -0.75
UBE4B-208ENST00000475795 USP6P35125 1406 aa10.38□□□□□ -0.75
UBE4B-208ENST00000475795 WNK3Q9BYP7 1800 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms