RNA–Protein interactions for RNA: ENST00000475663.2

NIPAL3-206, Transcript of NIPA like domain containing 3, humanhuman

TSL 3

Gene NIPAL3, Length 694 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-206ENST00000475663 CLSPNQ9HAW4 1339 aa18.63■□□□□ 0.57
NIPAL3-206ENST00000475663 FAM83GA6ND36 823 aa18.62■□□□□ 0.57
NIPAL3-206ENST00000475663 BCL9LQ86UU0 1499 aa18.62■□□□□ 0.57
NIPAL3-206ENST00000475663 ALS2Q96Q42 1657 aa18.62■□□□□ 0.57
NIPAL3-206ENST00000475663 RBM6P78332 1123 aaKnown RBP18.61■□□□□ 0.57
NIPAL3-206ENST00000475663 ABTB2Q8N961 1025 aa18.61■□□□□ 0.57
NIPAL3-206ENST00000475663 TRPC5Q9UL62 973 aaPredicted RBP18.61■□□□□ 0.57
NIPAL3-206ENST00000475663 ATRNO75882 1429 aa18.59■□□□□ 0.57
NIPAL3-206ENST00000475663 TESK2Q96S53 571 aa18.59■□□□□ 0.57
NIPAL3-206ENST00000475663 ABCA3Q99758 1704 aa18.58■□□□□ 0.57
NIPAL3-206ENST00000475663 ZC3H6P61129 1189 aaKnown RBP18.58■□□□□ 0.56
NIPAL3-206ENST00000475663 CHRNA2Q15822 529 aa18.58■□□□□ 0.56
NIPAL3-206ENST00000475663 UNC5CLQ8IV45 518 aa18.58■□□□□ 0.56
NIPAL3-206ENST00000475663 TMC1Q8TDI8 760 aa18.58■□□□□ 0.56
NIPAL3-206ENST00000475663 SLIT2O94813 1529 aa18.58■□□□□ 0.56
NIPAL3-206ENST00000475663 RGS12O14924 1447 aa18.57■□□□□ 0.56
NIPAL3-206ENST00000475663 USP6P35125 1406 aa18.57■□□□□ 0.56
NIPAL3-206ENST00000475663 USP47Q96K76 1375 aa18.57■□□□□ 0.56
NIPAL3-206ENST00000475663 SBNO2Q9Y2G9 1366 aa18.57■□□□□ 0.56
NIPAL3-206ENST00000475663 MARF1Q9Y4F3 1742 aaKnown RBP18.57■□□□□ 0.56
NIPAL3-206ENST00000475663 ATAD2Q6PL18 1390 aa18.56■□□□□ 0.56
NIPAL3-206ENST00000475663 SLC12A5Q9H2X9 1139 aa18.56■□□□□ 0.56
NIPAL3-206ENST00000475663 PRDM11Q9NQV5 511 aa18.55■□□□□ 0.56
NIPAL3-206ENST00000475663 BTG4Q9NY30 223 aa18.55■□□□□ 0.56
NIPAL3-206ENST00000475663 TIMELESSQ9UNS1 1208 aa18.55■□□□□ 0.56
NIPAL3-206ENST00000475663 CCDC9Q9Y3X0 531 aaKnown RBP18.55■□□□□ 0.56
NIPAL3-206ENST00000475663 KIAA0232Q92628 1395 aa18.55■□□□□ 0.56
NIPAL3-206ENST00000475663 ZBTB7CA1YPR0 619 aa18.54■□□□□ 0.56
NIPAL3-206ENST00000475663 GJD4Q96KN9 370 aaPredicted RBP18.54■□□□□ 0.56
NIPAL3-206ENST00000475663 NLRP6P59044 892 aa18.53■□□□□ 0.56
NIPAL3-206ENST00000475663 TTC21BQ7Z4L5 1316 aa18.52■□□□□ 0.56
NIPAL3-206ENST00000475663 SSH2Q76I76 1423 aa18.52■□□□□ 0.56
NIPAL3-206ENST00000475663 NLRP13Q86W25 1043 aa18.52■□□□□ 0.56
NIPAL3-206ENST00000475663 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.52■□□□□ 0.56
NIPAL3-206ENST00000475663 ZRANB1Q9UGI0 708 aa18.52■□□□□ 0.56
NIPAL3-206ENST00000475663 KTN1Q86UP2 1357 aaKnown RBP18.52■□□□□ 0.55
NIPAL3-206ENST00000475663 CRYBG1Q9Y4K1 1723 aa18.52■□□□□ 0.55
NIPAL3-206ENST00000475663 SOX12O15370 315 aa18.51■□□□□ 0.55
NIPAL3-206ENST00000475663 CDK12Q9NYV4 1490 aaPredicted RBP18.51■□□□□ 0.55
NIPAL3-206ENST00000475663 PLCH1Q4KWH8 1693 aa18.5■□□□□ 0.55
NIPAL3-206ENST00000475663 USP19O94966 1318 aa18.5■□□□□ 0.55
NIPAL3-206ENST00000475663 CPSF1Q10570 1443 aaKnown RBP18.5■□□□□ 0.55
NIPAL3-206ENST00000475663 VPS72Q15906 364 aa18.5■□□□□ 0.55
NIPAL3-206ENST00000475663 ZNF692Q9BU19 519 aaPredicted RBP18.5■□□□□ 0.55
NIPAL3-206ENST00000475663 PHRF1Q9P1Y6 1649 aaKnown RBP18.49■□□□□ 0.55
NIPAL3-206ENST00000475663 GCP02774 474 aa18.49■□□□□ 0.55
NIPAL3-206ENST00000475663 STRN4Q9NRL3 753 aa18.49■□□□□ 0.55
NIPAL3-206ENST00000475663 CD163L1Q9NR16 1453 aa18.49■□□□□ 0.55
NIPAL3-206ENST00000475663 GLI3P10071 1580 aa18.48■□□□□ 0.55
NIPAL3-206ENST00000475663 HDGFL2Q7Z4V5 671 aaPredicted RBP18.47■□□□□ 0.55
NIPAL3-206ENST00000475663 NME9Q86XW9 330 aa18.47■□□□□ 0.55
NIPAL3-206ENST00000475663 NRKQ7Z2Y5 1582 aa18.47■□□□□ 0.55
NIPAL3-206ENST00000475663 BRD4O60885 1362 aaPredicted RBP18.46■□□□□ 0.55
NIPAL3-206ENST00000475663 TMF1P82094 1093 aa18.46■□□□□ 0.55
NIPAL3-206ENST00000475663 UPF1Q92900 1129 aaKnown RBP eCLIP18.46■□□□□ 0.55
NIPAL3-206ENST00000475663 COL14A1Q05707 1796 aaKnown RBP18.45■□□□□ 0.54
NIPAL3-206ENST00000475663 A0A1W2PP64 1363 aa18.45■□□□□ 0.54
NIPAL3-206ENST00000475663 PIK3C2AO00443 1686 aa18.45■□□□□ 0.54
NIPAL3-206ENST00000475663 A0A0G2JS52 829 aa18.45■□□□□ 0.54
NIPAL3-206ENST00000475663 MYT1Q01538 1121 aa18.45■□□□□ 0.54
NIPAL3-206ENST00000475663 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.44■□□□□ 0.54
NIPAL3-206ENST00000475663 FAM98CQ17RN3 349 aaKnown RBP18.44■□□□□ 0.54
NIPAL3-206ENST00000475663 SEPT12Q8IYM1 358 aa18.44■□□□□ 0.54
NIPAL3-206ENST00000475663 TERF2IPQ9NYB0 399 aa18.44■□□□□ 0.54
NIPAL3-206ENST00000475663 AKAP12Q02952 1782 aa18.44■□□□□ 0.54
NIPAL3-206ENST00000475663 TTC21AQ8NDW8 1320 aa18.44■□□□□ 0.54
NIPAL3-206ENST00000475663 PUS7Q96PZ0 661 aaKnown RBP18.43■□□□□ 0.54
NIPAL3-206ENST00000475663 USP35Q9P2H5 1018 aa18.43■□□□□ 0.54
NIPAL3-206ENST00000475663 NRAPQ86VF7 1730 aa18.43■□□□□ 0.54
NIPAL3-206ENST00000475663 NWD2Q9ULI1 1742 aa18.43■□□□□ 0.54
NIPAL3-206ENST00000475663 HSPA5P11021 654 aaKnown RBP18.42■□□□□ 0.54
NIPAL3-206ENST00000475663 EVA1CP58658 441 aa18.42■□□□□ 0.54
NIPAL3-206ENST00000475663 POLR3GLQ9BT43 218 aa18.42■□□□□ 0.54
NIPAL3-206ENST00000475663 CPDO75976 1380 aa18.42■□□□□ 0.54
NIPAL3-206ENST00000475663 LARP1Q6PKG0 1096 aaKnown RBP18.41■□□□□ 0.54
NIPAL3-206ENST00000475663 SPATA31A5Q5VU36 1347 aa18.41■□□□□ 0.54
NIPAL3-206ENST00000475663 SPATA31A7Q8IWB4 1347 aa18.41■□□□□ 0.54
NIPAL3-206ENST00000475663 CAMTA1Q9Y6Y1 1673 aa18.41■□□□□ 0.54
NIPAL3-206ENST00000475663 SLIT3O75094 1523 aa18.4■□□□□ 0.54
NIPAL3-206ENST00000475663 MON2Q7Z3U7 1717 aa18.39■□□□□ 0.53
NIPAL3-206ENST00000475663 EDC4Q6P2E9 1401 aaKnown RBP18.39■□□□□ 0.53
NIPAL3-206ENST00000475663 SLC24A1O60721 1099 aa18.38■□□□□ 0.53
NIPAL3-206ENST00000475663 EIF4G2P78344 907 aaKnown RBP eCLIP18.38■□□□□ 0.53
NIPAL3-206ENST00000475663 AXIN2Q9Y2T1 843 aa18.38■□□□□ 0.53
NIPAL3-206ENST00000475663 SPATA31A1Q5TZJ5 1347 aa18.38■□□□□ 0.53
NIPAL3-206ENST00000475663 FAM182BQ5T319 152 aa18.37■□□□□ 0.53
NIPAL3-206ENST00000475663 ARHGEF25Q86VW2 580 aa18.37■□□□□ 0.53
NIPAL3-206ENST00000475663 ONECUT3O60422 494 aaPredicted RBP18.36■□□□□ 0.53
NIPAL3-206ENST00000475663 FBLN1P23142 703 aa18.36■□□□□ 0.53
NIPAL3-206ENST00000475663 KCNH5Q8NCM2 988 aa18.36■□□□□ 0.53
NIPAL3-206ENST00000475663 LMO7Q8WWI1 1683 aa18.35■□□□□ 0.53
NIPAL3-206ENST00000475663 USP31Q70CQ4 1352 aa18.35■□□□□ 0.53
NIPAL3-206ENST00000475663 ANKRD36BQ8N2N9 1353 aa18.35■□□□□ 0.53
NIPAL3-206ENST00000475663 NINLQ9Y2I6 1382 aa18.35■□□□□ 0.53
NIPAL3-206ENST00000475663 AATKQ6ZMQ8 1374 aa18.34■□□□□ 0.53
NIPAL3-206ENST00000475663 CDCA8Q53HL2 280 aa18.34■□□□□ 0.53
NIPAL3-206ENST00000475663 KRT27Q7Z3Y8 459 aa18.34■□□□□ 0.53
NIPAL3-206ENST00000475663 NFAT5O94916 1531 aa18.33■□□□□ 0.53
NIPAL3-206ENST00000475663 COL5A2P05997 1499 aaPredicted RBP18.33■□□□□ 0.53
NIPAL3-206ENST00000475663 CARD14Q9BXL6 1004 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms