RNA–Protein interactions for RNA: ENST00000475551.5

CCM2-207, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-207ENST00000475551 SBNO2Q9Y2G9 1366 aa22.28■■□□□ 1.16
CCM2-207ENST00000475551 MORC1Q86VD1 984 aa22.28■■□□□ 1.16
CCM2-207ENST00000475551 FTSJ3Q8IY81 847 aaKnown RBP22.28■■□□□ 1.16
CCM2-207ENST00000475551 TNPO1Q92973 898 aaKnown RBP22.28■■□□□ 1.16
CCM2-207ENST00000475551 GBP4Q96PP9 640 aa22.28■■□□□ 1.16
CCM2-207ENST00000475551 GAS2L3Q86XJ1 694 aa22.26■■□□□ 1.15
CCM2-207ENST00000475551 MYO3AQ8NEV4 1616 aa22.26■■□□□ 1.15
CCM2-207ENST00000475551 MYOM2P54296 1465 aa22.26■■□□□ 1.15
CCM2-207ENST00000475551 RAB3GAP1Q15042 981 aa22.25■■□□□ 1.15
CCM2-207ENST00000475551 CFAP70Q5T0N1 1121 aa22.24■■□□□ 1.15
CCM2-207ENST00000475551 NSD3Q9BZ95 1437 aa22.24■■□□□ 1.15
CCM2-207ENST00000475551 VWDEQ8N2E2 1590 aa22.24■■□□□ 1.15
CCM2-207ENST00000475551 DDX19BQ9UMR2 479 aa22.24■■□□□ 1.15
CCM2-207ENST00000475551 TET3O43151 1660 aa22.21■■□□□ 1.15
CCM2-207ENST00000475551 CCDC173Q0VFZ6 552 aa22.2■■□□□ 1.14
CCM2-207ENST00000475551 CFAP53Q96M91 514 aa22.2■■□□□ 1.14
CCM2-207ENST00000475551 PPP1R9BQ96SB3 815 aa22.2■■□□□ 1.14
CCM2-207ENST00000475551 PDCL3Q9H2J4 239 aa22.2■■□□□ 1.14
CCM2-207ENST00000475551 HSP90AB1P08238 724 aaKnown RBP22.19■■□□□ 1.14
CCM2-207ENST00000475551 TRIM27P14373 513 aa22.19■■□□□ 1.14
CCM2-207ENST00000475551 USP32Q8NFA0 1604 aa22.19■■□□□ 1.14
CCM2-207ENST00000475551 ADGRB2O60241 1585 aa22.19■■□□□ 1.14
CCM2-207ENST00000475551 ABCC3O15438 1527 aa22.19■■□□□ 1.14
CCM2-207ENST00000475551 MTHFSP49914 203 aa22.18■■□□□ 1.14
CCM2-207ENST00000475551 TNNT2P45379 298 aaPredicted RBP22.17■■□□□ 1.14
CCM2-207ENST00000475551 SMC4Q9NTJ3 1288 aa22.17■■□□□ 1.14
CCM2-207ENST00000475551 ATF7IPQ6VMQ6 1270 aa22.17■■□□□ 1.14
CCM2-207ENST00000475551 ADGRF5Q8IZF2 1346 aa22.16■■□□□ 1.14
CCM2-207ENST00000475551 NUCB1Q02818 461 aa22.16■■□□□ 1.14
CCM2-207ENST00000475551 ITPRIPQ8IWB1 547 aa22.16■■□□□ 1.14
CCM2-207ENST00000475551 IBTKQ9P2D0 1353 aaPredicted RBP22.16■■□□□ 1.14
CCM2-207ENST00000475551 LMTK2Q8IWU2 1503 aa22.15■■□□□ 1.14
CCM2-207ENST00000475551 CLEC17AQ6ZS10 378 aa22.15■■□□□ 1.14
CCM2-207ENST00000475551 ZSCAN30Q86W11 494 aa22.14■■□□□ 1.13
CCM2-207ENST00000475551 ZBTB40Q9NUA8 1239 aa22.14■■□□□ 1.13
CCM2-207ENST00000475551 KIAA1211Q6ZU35 1233 aa22.14■■□□□ 1.13
CCM2-207ENST00000475551 KIF2CQ99661 725 aa22.14■■□□□ 1.13
CCM2-207ENST00000475551 NRXN1Q9ULB1 1477 aa22.14■■□□□ 1.13
CCM2-207ENST00000475551 CLTCQ00610 1675 aaKnown RBP22.13■■□□□ 1.13
CCM2-207ENST00000475551 ZC3H13Q5T200 1668 aaKnown RBP22.13■■□□□ 1.13
CCM2-207ENST00000475551 EFCAB6Q5THR3 1501 aa22.13■■□□□ 1.13
CCM2-207ENST00000475551 TERF1P54274 439 aa22.13■■□□□ 1.13
CCM2-207ENST00000475551 SSH1Q8WYL5 1049 aa22.13■■□□□ 1.13
CCM2-207ENST00000475551 CAMSAP1Q5T5Y3 1602 aa22.13■■□□□ 1.13
CCM2-207ENST00000475551 NASPP49321 788 aaPredicted RBP22.12■■□□□ 1.13
CCM2-207ENST00000475551 EXOSC9Q06265 439 aaKnown RBP22.12■■□□□ 1.13
CCM2-207ENST00000475551 BMP2KLQ5H9B9 411 aa22.12■■□□□ 1.13
CCM2-207ENST00000475551 PPP6R1Q9UPN7 881 aa22.12■■□□□ 1.13
CCM2-207ENST00000475551 OFD1O75665 1012 aa22.12■■□□□ 1.13
CCM2-207ENST00000475551 SLC12A5Q9H2X9 1139 aa22.12■■□□□ 1.13
CCM2-207ENST00000475551 IFT172Q9UG01 1749 aa22.11■■□□□ 1.13
CCM2-207ENST00000475551 TSR2Q969E8 191 aaKnown RBP22.11■■□□□ 1.13
CCM2-207ENST00000475551 ESF1Q9H501 851 aaKnown RBP22.11■■□□□ 1.13
CCM2-207ENST00000475551 SETBP1Q9Y6X0 1596 aa22.11■■□□□ 1.13
CCM2-207ENST00000475551 GOLGA6L22H0YM25 854 aa22.11■■□□□ 1.13
CCM2-207ENST00000475551 K7ELQ4 463 aaPredicted RBP22.11■■□□□ 1.13
CCM2-207ENST00000475551 U2AF1L5P0DN76 240 aaPredicted RBP22.1■■□□□ 1.13
CCM2-207ENST00000475551 U2AF1Q01081 240 aaKnown RBP eCLIP22.1■■□□□ 1.13
CCM2-207ENST00000475551 ANP32BQ92688 251 aaKnown RBP22.1■■□□□ 1.13
CCM2-207ENST00000475551 NOS1P29475 1434 aa22.1■■□□□ 1.13
CCM2-207ENST00000475551 KLHL40Q2TBA0 621 aa22.09■■□□□ 1.13
CCM2-207ENST00000475551 CHD1LQ86WJ1 897 aa22.09■■□□□ 1.13
CCM2-207ENST00000475551 TMEM57Q8N5G2 664 aa22.09■■□□□ 1.13
CCM2-207ENST00000475551 NOB1Q9ULX3 412 aaKnown RBP22.09■■□□□ 1.13
CCM2-207ENST00000475551 NPATQ14207 1427 aa22.09■■□□□ 1.13
CCM2-207ENST00000475551 ARHGAP31Q2M1Z3 1444 aa22.09■■□□□ 1.13
CCM2-207ENST00000475551 KIF16BQ96L93 1317 aa22.09■■□□□ 1.13
CCM2-207ENST00000475551 ABCC11Q96J66 1382 aa22.08■■□□□ 1.13
CCM2-207ENST00000475551 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.08■■□□□ 1.13
CCM2-207ENST00000475551 NSD2O96028 1365 aa22.08■■□□□ 1.12
CCM2-207ENST00000475551 LNPKQ9C0E8 428 aa22.07■■□□□ 1.12
CCM2-207ENST00000475551 IL16Q14005 1332 aa22.07■■□□□ 1.12
CCM2-207ENST00000475551 KIF1BO60333 1816 aa22.06■■□□□ 1.12
CCM2-207ENST00000475551 IPO8O15397 1037 aaKnown RBP22.06■■□□□ 1.12
CCM2-207ENST00000475551 CD2BP2O95400 341 aaKnown RBP22.06■■□□□ 1.12
CCM2-207ENST00000475551 MSNP26038 577 aaKnown RBP22.06■■□□□ 1.12
CCM2-207ENST00000475551 HS1BP3Q53T59 392 aa22.06■■□□□ 1.12
CCM2-207ENST00000475551 CFAP65Q6ZU64 1925 aaKnown RBP22.06■■□□□ 1.12
CCM2-207ENST00000475551 FER1L4A9Z1Z3 1794 aa22.05■■□□□ 1.12
CCM2-207ENST00000475551 SSFA2P28290 1259 aa22.05■■□□□ 1.12
CCM2-207ENST00000475551 UGGT1Q9NYU2 1555 aa22.04■■□□□ 1.12
CCM2-207ENST00000475551 ZNF445P59923 1031 aa22.04■■□□□ 1.12
CCM2-207ENST00000475551 PLEKHF1Q96S99 279 aa22.04■■□□□ 1.12
CCM2-207ENST00000475551 TRIM35Q9UPQ4 493 aa22.04■■□□□ 1.12
CCM2-207ENST00000475551 BAG4O95429 457 aaKnown RBP22.03■■□□□ 1.12
CCM2-207ENST00000475551 TMPOP42166 694 aaKnown RBP22.03■■□□□ 1.12
CCM2-207ENST00000475551 DDX49Q9Y6V7 483 aaKnown RBP22.03■■□□□ 1.12
CCM2-207ENST00000475551 QRICH2Q9H0J4 1663 aa22.03■■□□□ 1.12
CCM2-207ENST00000475551 FBXO31Q5XUX0 539 aaPredicted RBP22.02■■□□□ 1.12
CCM2-207ENST00000475551 GAS2L2Q8NHY3 880 aa22.02■■□□□ 1.12
CCM2-207ENST00000475551 PUS7Q96PZ0 661 aaKnown RBP22.02■■□□□ 1.12
CCM2-207ENST00000475551 FOXD4L1Q9NU39 408 aa22.02■■□□□ 1.12
CCM2-207ENST00000475551 PLPPR3Q6T4P5 718 aa22.01■■□□□ 1.11
CCM2-207ENST00000475551 GCC1Q96CN9 775 aa22.01■■□□□ 1.11
CCM2-207ENST00000475551 ADAMTSL3P82987 1691 aa22■■□□□ 1.11
CCM2-207ENST00000475551 CALD1Q05682 793 aaKnown RBP22■■□□□ 1.11
CCM2-207ENST00000475551 ALDH1L2Q3SY69 923 aa22■■□□□ 1.11
CCM2-207ENST00000475551 MAP7D2Q96T17 732 aa22■■□□□ 1.11
CCM2-207ENST00000475551 MROH2AA6NES4 1674 aa22■■□□□ 1.11
CCM2-207ENST00000475551 RIPK4P57078 832 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms