RNA–Protein interactions for RNA: ENST00000475463.6

PCNX2-209, Transcript of pecanex 2, humanhuman

TSL 1 (best)

Gene PCNX2, Length 2,183 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX2-209ENST00000475463 NCKAP5LQ9HCH0 1330 aa17.27■□□□□ 0.36
PCNX2-209ENST00000475463 EDC4Q6P2E9 1401 aaKnown RBP17.27■□□□□ 0.36
PCNX2-209ENST00000475463 PTPRUQ92729 1446 aa17.27■□□□□ 0.36
PCNX2-209ENST00000475463 MON2Q7Z3U7 1717 aa17.27■□□□□ 0.36
PCNX2-209ENST00000475463 CCDC61Q9Y6R9 512 aa17.27■□□□□ 0.36
PCNX2-209ENST00000475463 AKAP12Q02952 1782 aa17.27■□□□□ 0.35
PCNX2-209ENST00000475463 WDR63Q8IWG1 891 aa17.26■□□□□ 0.35
PCNX2-209ENST00000475463 PRR36Q9H6K5 1346 aa17.26■□□□□ 0.35
PCNX2-209ENST00000475463 PLEKHF1Q96S99 279 aa17.26■□□□□ 0.35
PCNX2-209ENST00000475463 EID1Q9Y6B2 187 aa17.26■□□□□ 0.35
PCNX2-209ENST00000475463 MAP2P11137 1827 aaKnown RBP17.25■□□□□ 0.35
PCNX2-209ENST00000475463 PLPPR3Q6T4P5 718 aa17.25■□□□□ 0.35
PCNX2-209ENST00000475463 SLC26A8Q96RN1 970 aa17.25■□□□□ 0.35
PCNX2-209ENST00000475463 ITSN1Q15811 1721 aa17.24■□□□□ 0.35
PCNX2-209ENST00000475463 U2SURPO15042 1029 aaKnown RBP17.23■□□□□ 0.35
PCNX2-209ENST00000475463 POLKQ9UBT6 870 aa17.23■□□□□ 0.35
PCNX2-209ENST00000475463 FBLN1P23142 703 aa17.23■□□□□ 0.35
PCNX2-209ENST00000475463 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.23■□□□□ 0.35
PCNX2-209ENST00000475463 DIAPH1O60610 1272 aaKnown RBP17.22■□□□□ 0.35
PCNX2-209ENST00000475463 BCAR3O75815 825 aa17.22■□□□□ 0.35
PCNX2-209ENST00000475463 NME9Q86XW9 330 aa17.22■□□□□ 0.35
PCNX2-209ENST00000475463 TBX22Q9Y458 520 aa17.22■□□□□ 0.35
PCNX2-209ENST00000475463 TOPAZ1Q8N9V7 1692 aa17.22■□□□□ 0.35
PCNX2-209ENST00000475463 THEMISQ8N1K5 641 aaPredicted RBP17.22■□□□□ 0.35
PCNX2-209ENST00000475463 ZRANB1Q9UGI0 708 aa17.21■□□□□ 0.35
PCNX2-209ENST00000475463 ZNF692Q9BU19 519 aaPredicted RBP17.19■□□□□ 0.34
PCNX2-209ENST00000475463 AMOTL2Q9Y2J4 779 aa17.19■□□□□ 0.34
PCNX2-209ENST00000475463 AATKQ6ZMQ8 1374 aa17.19■□□□□ 0.34
PCNX2-209ENST00000475463 TMPOP42166 694 aaKnown RBP17.19■□□□□ 0.34
PCNX2-209ENST00000475463 DIP2AQ14689 1571 aa17.18■□□□□ 0.34
PCNX2-209ENST00000475463 NRKQ7Z2Y5 1582 aa17.17■□□□□ 0.34
PCNX2-209ENST00000475463 PTCH1Q13635 1447 aa17.17■□□□□ 0.34
PCNX2-209ENST00000475463 PLEKHG3A1L390 1219 aa17.17■□□□□ 0.34
PCNX2-209ENST00000475463 TRIM35Q9UPQ4 493 aa17.17■□□□□ 0.34
PCNX2-209ENST00000475463 EMILIN1Q9Y6C2 1016 aa17.16■□□□□ 0.34
PCNX2-209ENST00000475463 CEP170BQ9Y4F5 1589 aaPredicted RBP17.16■□□□□ 0.34
PCNX2-209ENST00000475463 RIMS1Q86UR5 1692 aaKnown RBP17.16■□□□□ 0.34
PCNX2-209ENST00000475463 FANCIQ9NVI1 1328 aa17.15■□□□□ 0.34
PCNX2-209ENST00000475463 MAPK8IP3Q9UPT6 1336 aa17.15■□□□□ 0.34
PCNX2-209ENST00000475463 LRRC7Q96NW7 1537 aa17.15■□□□□ 0.34
PCNX2-209ENST00000475463 CDK12Q9NYV4 1490 aaPredicted RBP17.15■□□□□ 0.34
PCNX2-209ENST00000475463 PPM1GO15355 546 aaPredicted RBP17.15■□□□□ 0.34
PCNX2-209ENST00000475463 FCHSD2O94868 740 aa17.15■□□□□ 0.34
PCNX2-209ENST00000475463 COG3Q96JB2 828 aa17.15■□□□□ 0.34
PCNX2-209ENST00000475463 XRN1Q8IZH2 1706 aaKnown RBP17.15■□□□□ 0.34
PCNX2-209ENST00000475463 RARSP54136 660 aaKnown RBP17.15■□□□□ 0.34
PCNX2-209ENST00000475463 PNNQ9H307 717 aaKnown RBP17.15■□□□□ 0.34
PCNX2-209ENST00000475463 ACEP12821 1306 aa17.14■□□□□ 0.33
PCNX2-209ENST00000475463 RSPH6AQ9H0K4 717 aa17.14■□□□□ 0.33
PCNX2-209ENST00000475463 MYH16Q9H6N6 1097 aa17.14■□□□□ 0.33
PCNX2-209ENST00000475463 IL13P35225 146 aa17.13■□□□□ 0.33
PCNX2-209ENST00000475463 TTC21BQ7Z4L5 1316 aa17.13■□□□□ 0.33
PCNX2-209ENST00000475463 KDM2BQ8NHM5 1336 aa17.13■□□□□ 0.33
PCNX2-209ENST00000475463 NUTM2FA1L443 756 aa17.13■□□□□ 0.33
PCNX2-209ENST00000475463 PDE3AQ14432 1141 aa17.12■□□□□ 0.33
PCNX2-209ENST00000475463 USP6P35125 1406 aa17.12■□□□□ 0.33
PCNX2-209ENST00000475463 RIPK4P57078 832 aa17.12■□□□□ 0.33
PCNX2-209ENST00000475463 RGPD8O14715 1765 aaPredicted RBP17.11■□□□□ 0.33
PCNX2-209ENST00000475463 PRKAR2BP31323 418 aa17.11■□□□□ 0.33
PCNX2-209ENST00000475463 RRS1Q15050 365 aaKnown RBP17.11■□□□□ 0.33
PCNX2-209ENST00000475463 SSH2Q76I76 1423 aa17.1■□□□□ 0.33
PCNX2-209ENST00000475463 IL16Q14005 1332 aa17.1■□□□□ 0.33
PCNX2-209ENST00000475463 TCERG1O14776 1098 aaKnown RBP17.1■□□□□ 0.33
PCNX2-209ENST00000475463 OVOS2A0A0J9YW53 1432 aa17.1■□□□□ 0.33
PCNX2-209ENST00000475463 OVOS2Q6IE36 1432 aa17.1■□□□□ 0.33
PCNX2-209ENST00000475463 ADAMTSL3P82987 1691 aa17.09■□□□□ 0.33
PCNX2-209ENST00000475463 TSR2Q969E8 191 aaKnown RBP17.09■□□□□ 0.33
PCNX2-209ENST00000475463 PIK3R4Q99570 1358 aa17.08■□□□□ 0.33
PCNX2-209ENST00000475463 NALCNQ8IZF0 1738 aa17.08■□□□□ 0.33
PCNX2-209ENST00000475463 ZNF142P52746 1687 aaPredicted RBP17.08■□□□□ 0.32
PCNX2-209ENST00000475463 HMOX1P09601 288 aa17.08■□□□□ 0.32
PCNX2-209ENST00000475463 PHACTR3Q96KR7 559 aa17.08■□□□□ 0.32
PCNX2-209ENST00000475463 CT47B1P0C2W7 299 aaPredicted RBP17.07■□□□□ 0.32
PCNX2-209ENST00000475463 KCNA6P17658 529 aa17.07■□□□□ 0.32
PCNX2-209ENST00000475463 CENPQQ7L2Z9 268 aaPredicted RBP17.07■□□□□ 0.32
PCNX2-209ENST00000475463 PANK1Q8TE04 598 aa17.06■□□□□ 0.32
PCNX2-209ENST00000475463 FRAT1Q92837 279 aaPredicted RBP17.06■□□□□ 0.32
PCNX2-209ENST00000475463 MSH5O43196 834 aa17.06■□□□□ 0.32
PCNX2-209ENST00000475463 EXOSC9Q06265 439 aaKnown RBP17.06■□□□□ 0.32
PCNX2-209ENST00000475463 MS4A1P11836 297 aa17.05■□□□□ 0.32
PCNX2-209ENST00000475463 CANXP27824 592 aaKnown RBP17.05■□□□□ 0.32
PCNX2-209ENST00000475463 SKAP1Q86WV1 359 aa17.05■□□□□ 0.32
PCNX2-209ENST00000475463 BCL2L13Q9BXK5 485 aa17.05■□□□□ 0.32
PCNX2-209ENST00000475463 USP31Q70CQ4 1352 aa17.05■□□□□ 0.32
PCNX2-209ENST00000475463 SETD1BQ9UPS6 1966 aaKnown RBP17.05■□□□□ 0.32
PCNX2-209ENST00000475463 NFE2L2Q16236 605 aa17.05■□□□□ 0.32
PCNX2-209ENST00000475463 PMFBP1Q8TBY8 1022 aa17.05■□□□□ 0.32
PCNX2-209ENST00000475463 COG6Q9Y2V7 657 aa17.05■□□□□ 0.32
PCNX2-209ENST00000475463 CHD2O14647 1828 aaKnown RBP17.05■□□□□ 0.32
PCNX2-209ENST00000475463 TNNQ9UQP3 1299 aa17.04■□□□□ 0.32
PCNX2-209ENST00000475463 PEAK1Q9H792 1746 aa17.04■□□□□ 0.32
PCNX2-209ENST00000475463 NEFMP07197 916 aa17.04■□□□□ 0.32
PCNX2-209ENST00000475463 DLG5Q8TDM6 1919 aa17.03■□□□□ 0.32
PCNX2-209ENST00000475463 RLBP1P12271 317 aa17.03■□□□□ 0.32
PCNX2-209ENST00000475463 FMN2Q9NZ56 1722 aa17.03■□□□□ 0.32
PCNX2-209ENST00000475463 TTC21AQ8NDW8 1320 aa17.02■□□□□ 0.32
PCNX2-209ENST00000475463 ANKLE2Q86XL3 938 aa17.02■□□□□ 0.32
PCNX2-209ENST00000475463 ANKARQ7Z5J8 1434 aa17.02■□□□□ 0.32
PCNX2-209ENST00000475463 EIF4A2Q14240 407 aaKnown RBP17.01■□□□□ 0.31
PCNX2-209ENST00000475463 CLUAP1Q96AJ1 413 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms