RNA–Protein interactions for RNA: ENST00000475315.5

FXR1-211, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 2

Gene FXR1, Length 2,341 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-211ENST00000475315 RBM27Q9P2N5 1060 aaKnown RBP14.53□□□□□ -0.08
FXR1-211ENST00000475315 KIF16BQ96L93 1317 aa14.52□□□□□ -0.08
FXR1-211ENST00000475315 TSPY4P0CV99 314 aa14.52□□□□□ -0.08
FXR1-211ENST00000475315 TSPY10P0CW01 314 aa14.52□□□□□ -0.08
FXR1-211ENST00000475315 NUCB2P80303 420 aa14.52□□□□□ -0.08
FXR1-211ENST00000475315 CCDC27Q2M243 656 aa14.52□□□□□ -0.08
FXR1-211ENST00000475315 RUNDC1Q96C34 613 aa14.52□□□□□ -0.08
FXR1-211ENST00000475315 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.52□□□□□ -0.084e-9■■□□□ 12.5
FXR1-211ENST00000475315 RRP7AQ9Y3A4 280 aaKnown RBP14.52□□□□□ -0.09
FXR1-211ENST00000475315 FTSJ3Q8IY81 847 aaKnown RBP14.51□□□□□ -0.09
FXR1-211ENST00000475315 TCP11L2Q8N4U5 519 aa14.51□□□□□ -0.09
FXR1-211ENST00000475315 TMEM63CQ9P1W3 806 aa14.51□□□□□ -0.09
FXR1-211ENST00000475315 SCAF11Q99590 1463 aaKnown RBP14.51□□□□□ -0.09
FXR1-211ENST00000475315 NEUROD2Q15784 382 aa14.5□□□□□ -0.09
FXR1-211ENST00000475315 DDX19BQ9UMR2 479 aa14.5□□□□□ -0.09
FXR1-211ENST00000475315 PDIA4P13667 645 aaKnown RBP14.5□□□□□ -0.09
FXR1-211ENST00000475315 TRIM27P14373 513 aa14.49□□□□□ -0.09
FXR1-211ENST00000475315 TAF3Q5VWG9 929 aa14.49□□□□□ -0.09
FXR1-211ENST00000475315 IPO4Q8TEX9 1081 aaKnown RBP14.49□□□□□ -0.09
FXR1-211ENST00000475315 PIBF1Q8WXW3 757 aa14.49□□□□□ -0.09
FXR1-211ENST00000475315 CLTCL1P53675 1640 aa14.49□□□□□ -0.09
FXR1-211ENST00000475315 SPHKAPQ2M3C7 1700 aa14.49□□□□□ -0.09
FXR1-211ENST00000475315 TTC37Q6PGP7 1564 aa14.49□□□□□ -0.09
FXR1-211ENST00000475315 PKP1Q13835 747 aa14.48□□□□□ -0.09
FXR1-211ENST00000475315 TBC1D9Q6ZT07 1266 aa14.48□□□□□ -0.09
FXR1-211ENST00000475315 CHD1LQ86WJ1 897 aa14.48□□□□□ -0.09
FXR1-211ENST00000475315 CARD14Q9BXL6 1004 aa14.48□□□□□ -0.09
FXR1-211ENST00000475315 LNPKQ9C0E8 428 aa14.48□□□□□ -0.09
FXR1-211ENST00000475315 ZBTB40Q9NUA8 1239 aa14.48□□□□□ -0.09
FXR1-211ENST00000475315 PRPF40AO75400 957 aaKnown RBP14.48□□□□□ -0.09
FXR1-211ENST00000475315 NCBP3Q53F19 620 aaKnown RBP14.48□□□□□ -0.09
FXR1-211ENST00000475315 CHMP4BQ9H444 224 aaKnown RBP14.48□□□□□ -0.09
FXR1-211ENST00000475315 PLB1Q6P1J6 1458 aa14.47□□□□□ -0.09
FXR1-211ENST00000475315 SYCE3A1L190 88 aa14.47□□□□□ -0.09
FXR1-211ENST00000475315 CT47B1P0C2W7 299 aaPredicted RBP14.47□□□□□ -0.09
FXR1-211ENST00000475315 BCL2L12Q9HB09 334 aa14.47□□□□□ -0.09
FXR1-211ENST00000475315 DUOX2Q9NRD8 1548 aa14.47□□□□□ -0.09
FXR1-211ENST00000475315 NSFL1CQ9UNZ2 370 aaKnown RBP14.47□□□□□ -0.09
FXR1-211ENST00000475315 ADGRB2O60241 1585 aa14.46□□□□□ -0.09
FXR1-211ENST00000475315 NOLC1Q14978 699 aaKnown RBP eCLIP14.46□□□□□ -0.09
FXR1-211ENST00000475315 ZDHHC9Q9Y397 364 aa14.46□□□□□ -0.09
FXR1-211ENST00000475315 KIF3AQ9Y496 699 aa14.46□□□□□ -0.09
FXR1-211ENST00000475315 REREQ9P2R6 1566 aa14.46□□□□□ -0.09
FXR1-211ENST00000475315 ITPRIPQ8IWB1 547 aa14.46□□□□□ -0.1
FXR1-211ENST00000475315 PPRC1Q5VV67 1664 aaKnown RBP14.45□□□□□ -0.1
FXR1-211ENST00000475315 DNTTIP2Q5QJE6 756 aaKnown RBP14.45□□□□□ -0.1
FXR1-211ENST00000475315 ATF7IPQ6VMQ6 1270 aa14.45□□□□□ -0.1
FXR1-211ENST00000475315 SPTLC3Q9NUV7 552 aa14.45□□□□□ -0.1
FXR1-211ENST00000475315 HNRNPMP52272 730 aaKnown RBP eCLIP14.44□□□□□ -0.16e-6■■■■□ 20.3
FXR1-211ENST00000475315 FKBP5Q13451 457 aaPredicted RBP14.44□□□□□ -0.1
FXR1-211ENST00000475315 ANKRD7Q92527 254 aa14.44□□□□□ -0.1
FXR1-211ENST00000475315 ERVK-7P63135 1459 aa14.44□□□□□ -0.1
FXR1-211ENST00000475315 NOS1P29475 1434 aa14.44□□□□□ -0.1
FXR1-211ENST00000475315 PDS5BQ9NTI5 1447 aa14.44□□□□□ -0.1
FXR1-211ENST00000475315 SPDYE4A6NLX3 237 aa14.44□□□□□ -0.1
FXR1-211ENST00000475315 FAM177BA6PVY3 158 aa14.44□□□□□ -0.1
FXR1-211ENST00000475315 RABEP1Q15276 862 aa14.44□□□□□ -0.1
FXR1-211ENST00000475315 CWC22Q9HCG8 908 aaKnown RBP14.44□□□□□ -0.1
FXR1-211ENST00000475315 PTMAP06454 111 aaKnown RBP14.43□□□□□ -0.1
FXR1-211ENST00000475315 PDCL2Q8N4E4 241 aa14.43□□□□□ -0.1
FXR1-211ENST00000475315 TMEM57Q8N5G2 664 aa14.43□□□□□ -0.1
FXR1-211ENST00000475315 RNF214Q8ND24 703 aa14.43□□□□□ -0.1
FXR1-211ENST00000475315 SMC4Q9NTJ3 1288 aa14.43□□□□□ -0.1
FXR1-211ENST00000475315 SAMD9LQ8IVG5 1584 aa14.43□□□□□ -0.1
FXR1-211ENST00000475315 KIAA1210Q9ULL0 1709 aa14.43□□□□□ -0.1
FXR1-211ENST00000475315 MAST1Q9Y2H9 1570 aa14.42□□□□□ -0.1
FXR1-211ENST00000475315 SSH1Q8WYL5 1049 aa14.42□□□□□ -0.1
FXR1-211ENST00000475315 ZNF830Q96NB3 372 aaPredicted RBP14.42□□□□□ -0.1
FXR1-211ENST00000475315 ADGRL1O94910 1474 aa14.41□□□□□ -0.1
FXR1-211ENST00000475315 MAGI1Q96QZ7 1491 aaPredicted RBP14.41□□□□□ -0.1
FXR1-211ENST00000475315 ABCA8O94911 1581 aa14.41□□□□□ -0.1
FXR1-211ENST00000475315 MBD3O95983 291 aa14.41□□□□□ -0.1
FXR1-211ENST00000475315 U2AF2P26368 475 aaKnown RBP eCLIP14.41□□□□□ -0.11e-6■■■□□ 14.6
FXR1-211ENST00000475315 TSPY26PQ9H489 355 aa14.41□□□□□ -0.1
FXR1-211ENST00000475315 ZNF518AQ6AHZ1 1483 aa14.41□□□□□ -0.1
FXR1-211ENST00000475315 IFT140Q96RY7 1462 aa14.41□□□□□ -0.1
FXR1-211ENST00000475315 CDC42BPBQ9Y5S2 1711 aa14.4□□□□□ -0.1
FXR1-211ENST00000475315 ZBTB7CA1YPR0 619 aa14.4□□□□□ -0.1
FXR1-211ENST00000475315 CHAMP1Q96JM3 812 aa14.4□□□□□ -0.1
FXR1-211ENST00000475315 IGSF3O75054 1194 aa14.4□□□□□ -0.11
FXR1-211ENST00000475315 ZGPATQ8N5A5 531 aaKnown RBP14.4□□□□□ -0.11
FXR1-211ENST00000475315 FEZ1Q99689 392 aa14.4□□□□□ -0.11
FXR1-211ENST00000475315 CGNQ9P2M7 1197 aaKnown RBP14.4□□□□□ -0.11
FXR1-211ENST00000475315 NOB1Q9ULX3 412 aaKnown RBP14.4□□□□□ -0.11
FXR1-211ENST00000475315 MED14O60244 1454 aa14.39□□□□□ -0.11
FXR1-211ENST00000475315 PPIP5K1Q6PFW1 1433 aa14.39□□□□□ -0.11
FXR1-211ENST00000475315 YEATS2Q9ULM3 1422 aa14.39□□□□□ -0.11
FXR1-211ENST00000475315 CTIFO43310 598 aaKnown RBP14.39□□□□□ -0.11
FXR1-211ENST00000475315 CDC45O75419 566 aa14.39□□□□□ -0.11
FXR1-211ENST00000475315 EXOSC9Q06265 439 aaKnown RBP14.39□□□□□ -0.11
FXR1-211ENST00000475315 C17orf53Q8N3J3 647 aaPredicted RBP14.39□□□□□ -0.11
FXR1-211ENST00000475315 TSR2Q969E8 191 aaKnown RBP14.39□□□□□ -0.11
FXR1-211ENST00000475315 ZBTB22O15209 634 aa14.38□□□□□ -0.11
FXR1-211ENST00000475315 VGLL3A8MV65 326 aa14.38□□□□□ -0.11
FXR1-211ENST00000475315 UVSSAQ2YD98 709 aa14.37□□□□□ -0.11
FXR1-211ENST00000475315 GCC1Q96CN9 775 aa14.37□□□□□ -0.11
FXR1-211ENST00000475315 ANKRD45Q5TZF3 282 aa14.37□□□□□ -0.11
FXR1-211ENST00000475315 TTC12Q9H892 705 aaPredicted RBP14.37□□□□□ -0.11
FXR1-211ENST00000475315 OGFRQ9NZT2 677 aa14.37□□□□□ -0.11
FXR1-211ENST00000475315 PREX2Q70Z35 1606 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms