RNA–Protein interactions for RNA: ENST00000475183.1

TRO-221, Transcript of trophinin, humanhuman

TSL 3

Gene TRO, Length 632 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-221ENST00000475183 NPHP3Q7Z494 1330 aa16.35■□□□□ 0.21
TRO-221ENST00000475183 RGPD8O14715 1765 aaPredicted RBP16.35■□□□□ 0.21
TRO-221ENST00000475183 SSH2Q76I76 1423 aa16.35■□□□□ 0.21
TRO-221ENST00000475183 CCER2I3L3R5 266 aa16.34■□□□□ 0.21
TRO-221ENST00000475183 PSME1Q06323 249 aa16.33■□□□□ 0.2
TRO-221ENST00000475183 ANKRD26Q9UPS8 1709 aa16.33■□□□□ 0.2
TRO-221ENST00000475183 NUTM2FA1L443 756 aa16.32■□□□□ 0.2
TRO-221ENST00000475183 KIF20BQ96Q89 1820 aa16.31■□□□□ 0.2
TRO-221ENST00000475183 USP54Q70EL1 1684 aa16.31■□□□□ 0.2
TRO-221ENST00000475183 SBNO1A3KN83 1393 aa16.31■□□□□ 0.2
TRO-221ENST00000475183 USP31Q70CQ4 1352 aa16.31■□□□□ 0.2
TRO-221ENST00000475183 TTC21BQ7Z4L5 1316 aa16.31■□□□□ 0.2
TRO-221ENST00000475183 SOCS7O14512 581 aa16.31■□□□□ 0.2
TRO-221ENST00000475183 MYBBP1AQ9BQG0 1328 aaKnown RBP16.3■□□□□ 0.2
TRO-221ENST00000475183 PMFBP1Q8TBY8 1022 aa16.3■□□□□ 0.2
TRO-221ENST00000475183 FYB1O15117 783 aa16.29■□□□□ 0.2
TRO-221ENST00000475183 ORAI2Q96SN7 254 aa16.29■□□□□ 0.2
TRO-221ENST00000475183 BRINP3Q76B58 766 aa16.28■□□□□ 0.2
TRO-221ENST00000475183 NLRP13Q86W25 1043 aa16.28■□□□□ 0.2
TRO-221ENST00000475183 MORC1Q86VD1 984 aa16.27■□□□□ 0.2
TRO-221ENST00000475183 COG3Q96JB2 828 aa16.27■□□□□ 0.2
TRO-221ENST00000475183 ARHGEF10O15013 1369 aa16.26■□□□□ 0.19
TRO-221ENST00000475183 AATKQ6ZMQ8 1374 aa16.26■□□□□ 0.19
TRO-221ENST00000475183 OVOS2A0A0J9YW53 1432 aa16.26■□□□□ 0.19
TRO-221ENST00000475183 OVOS2Q6IE36 1432 aa16.26■□□□□ 0.19
TRO-221ENST00000475183 NHSL1Q5SYE7 1610 aa16.26■□□□□ 0.19
TRO-221ENST00000475183 TRPM3Q9HCF6 1732 aaPredicted RBP16.25■□□□□ 0.19
TRO-221ENST00000475183 PXDNQ92626 1479 aa16.25■□□□□ 0.19
TRO-221ENST00000475183 FOXO3O43524 673 aa16.25■□□□□ 0.19
TRO-221ENST00000475183 CC2D1BQ5T0F9 858 aaKnown RBP16.25■□□□□ 0.19
TRO-221ENST00000475183 KRT28Q7Z3Y7 464 aa16.25■□□□□ 0.19
TRO-221ENST00000475183 MIER1Q8N108 512 aa16.25■□□□□ 0.19
TRO-221ENST00000475183 AHDC1Q5TGY3 1603 aaPredicted RBP16.25■□□□□ 0.19
TRO-221ENST00000475183 SOS2Q07890 1332 aaPredicted RBP16.24■□□□□ 0.19
TRO-221ENST00000475183 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.24■□□□□ 0.19
TRO-221ENST00000475183 ROBO1Q9Y6N7 1651 aa16.24■□□□□ 0.19
TRO-221ENST00000475183 TNS3Q68CZ2 1445 aa16.23■□□□□ 0.19
TRO-221ENST00000475183 KIF24Q5T7B8 1368 aa16.23■□□□□ 0.19
TRO-221ENST00000475183 PIK3C2AO00443 1686 aa16.22■□□□□ 0.19
TRO-221ENST00000475183 ALS2Q96Q42 1657 aa16.21■□□□□ 0.19
TRO-221ENST00000475183 NME9Q86XW9 330 aa16.21■□□□□ 0.19
TRO-221ENST00000475183 ABTB2Q8N961 1025 aa16.21■□□□□ 0.19
TRO-221ENST00000475183 KCNH5Q8NCM2 988 aa16.21■□□□□ 0.19
TRO-221ENST00000475183 PHF23Q9BUL5 403 aaPredicted RBP16.21■□□□□ 0.19
TRO-221ENST00000475183 GGNBP2Q9H3C7 697 aa16.21■□□□□ 0.19
TRO-221ENST00000475183 PPP2R1AP30153 589 aa16.2■□□□□ 0.18
TRO-221ENST00000475183 SPATA31A3Q5VYP0 1347 aa16.19■□□□□ 0.18
TRO-221ENST00000475183 SMG6Q86US8 1419 aaKnown RBP16.19■□□□□ 0.18
TRO-221ENST00000475183 PAK3O75914 559 aaPredicted RBP16.19■□□□□ 0.18
TRO-221ENST00000475183 NLRP6P59044 892 aa16.19■□□□□ 0.18
TRO-221ENST00000475183 CFAP53Q96M91 514 aa16.19■□□□□ 0.18
TRO-221ENST00000475183 USP19O94966 1318 aa16.19■□□□□ 0.18
TRO-221ENST00000475183 INSRP06213 1382 aa16.18■□□□□ 0.18
TRO-221ENST00000475183 LRRC59Q96AG4 307 aaKnown RBP16.18■□□□□ 0.18
TRO-221ENST00000475183 SLIT3O75094 1523 aa16.18■□□□□ 0.18
TRO-221ENST00000475183 PHLPP1O60346 1717 aa16.16■□□□□ 0.18
TRO-221ENST00000475183 RTL1A6NKG5 1358 aa16.16■□□□□ 0.18
TRO-221ENST00000475183 ABCC6O95255 1503 aa16.16■□□□□ 0.18
TRO-221ENST00000475183 CDK12Q9NYV4 1490 aaPredicted RBP16.16■□□□□ 0.18
TRO-221ENST00000475183 MRS2Q9HD23 443 aa16.15■□□□□ 0.18
TRO-221ENST00000475183 PHRF1Q9P1Y6 1649 aaKnown RBP16.15■□□□□ 0.18
TRO-221ENST00000475183 PNPLA6Q8IY17 1366 aa16.14■□□□□ 0.17
TRO-221ENST00000475183 MARF1Q9Y4F3 1742 aaKnown RBP16.14■□□□□ 0.17
TRO-221ENST00000475183 NFAT5O94916 1531 aa16.12■□□□□ 0.17
TRO-221ENST00000475183 COL22A1Q8NFW1 1626 aaPredicted RBP16.12■□□□□ 0.17
TRO-221ENST00000475183 MTHFSP49914 203 aa16.11■□□□□ 0.17
TRO-221ENST00000475183 XPCQ01831 940 aaPredicted RBP16.11■□□□□ 0.17
TRO-221ENST00000475183 POLKQ9UBT6 870 aa16.11■□□□□ 0.17
TRO-221ENST00000475183 COL16A1Q07092 1604 aaPredicted RBP16.11■□□□□ 0.17
TRO-221ENST00000475183 CPDO75976 1380 aa16.11■□□□□ 0.17
TRO-221ENST00000475183 FLT4P35916 1363 aa16.11■□□□□ 0.17
TRO-221ENST00000475183 NUDCQ9Y266 331 aa16.1■□□□□ 0.17
TRO-221ENST00000475183 CRYBG1Q9Y4K1 1723 aa16.09■□□□□ 0.17
TRO-221ENST00000475183 GCP02774 474 aa16.09■□□□□ 0.17
TRO-221ENST00000475183 LMOD2Q6P5Q4 547 aa16.09■□□□□ 0.17
TRO-221ENST00000475183 MAP2P11137 1827 aaKnown RBP16.09■□□□□ 0.17
TRO-221ENST00000475183 TNNT2P45379 298 aaPredicted RBP16.08■□□□□ 0.16
TRO-221ENST00000475183 CNGB1Q14028 1251 aaPredicted RBP16.08■□□□□ 0.16
TRO-221ENST00000475183 PNISRQ8TF01 805 aaKnown RBP16.08■□□□□ 0.16
TRO-221ENST00000475183 ZRANB1Q9UGI0 708 aa16.08■□□□□ 0.16
TRO-221ENST00000475183 BLMP54132 1417 aaPredicted RBP16.07■□□□□ 0.16
TRO-221ENST00000475183 COL3A1P02461 1466 aaPredicted RBP16.06■□□□□ 0.16
TRO-221ENST00000475183 MAP3K19Q56UN5 1328 aa16.06■□□□□ 0.16
TRO-221ENST00000475183 WDR43Q15061 677 aaKnown RBP eCLIP16.06■□□□□ 0.16
TRO-221ENST00000475183 DDX17Q92841 729 aaKnown RBP16.06■□□□□ 0.16
TRO-221ENST00000475183 PNNQ9H307 717 aaKnown RBP16.06■□□□□ 0.16
TRO-221ENST00000475183 SHPRHQ149N8 1683 aa16.05■□□□□ 0.16
TRO-221ENST00000475183 DIAPH1O60610 1272 aaKnown RBP16.05■□□□□ 0.16
TRO-221ENST00000475183 AMPHP49418 695 aa16.05■□□□□ 0.16
TRO-221ENST00000475183 ARHGEF25Q86VW2 580 aa16.05■□□□□ 0.16
TRO-221ENST00000475183 JCADQ9P266 1359 aa16.04■□□□□ 0.16
TRO-221ENST00000475183 NUTM2GQ5VZR2 741 aa16.04■□□□□ 0.16
TRO-221ENST00000475183 IP6K1Q92551 441 aa16.04■□□□□ 0.16
TRO-221ENST00000475183 RGS17Q9UGC6 210 aaPredicted RBP16.04■□□□□ 0.16
TRO-221ENST00000475183 LTN1O94822 1766 aa16.03■□□□□ 0.16
TRO-221ENST00000475183 ABCA3Q99758 1704 aa16.03■□□□□ 0.16
TRO-221ENST00000475183 NGEFQ8N5V2 710 aa16.03■□□□□ 0.16
TRO-221ENST00000475183 EMILIN1Q9Y6C2 1016 aa16.03■□□□□ 0.16
TRO-221ENST00000475183 PLEKHG2Q9H7P9 1386 aa16.02■□□□□ 0.16
TRO-221ENST00000475183 HAP1P54257 671 aaPredicted RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms