RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 NBPF1Q3BBV0 1214 aa13.58□□□□□ -0.24
PDPN-204ENST00000475043 L3MBTL2Q969R5 705 aa13.58□□□□□ -0.24
PDPN-204ENST00000475043 TULP4Q9NRJ4 1543 aa13.58□□□□□ -0.24
PDPN-204ENST00000475043 SPATA31A3Q5VYP0 1347 aa13.58□□□□□ -0.24
PDPN-204ENST00000475043 TRIM26Q12899 539 aaPredicted RBP13.57□□□□□ -0.24
PDPN-204ENST00000475043 LMOD2Q6P5Q4 547 aa13.57□□□□□ -0.24
PDPN-204ENST00000475043 QTRT2Q9H974 415 aaKnown RBP13.57□□□□□ -0.24
PDPN-204ENST00000475043 ITSN1Q15811 1721 aa13.56□□□□□ -0.24
PDPN-204ENST00000475043 FXR2P51116 673 aaKnown RBP eCLIP13.56□□□□□ -0.24
PDPN-204ENST00000475043 HAP1P54257 671 aaPredicted RBP13.56□□□□□ -0.24
PDPN-204ENST00000475043 USP21Q9UK80 565 aa13.56□□□□□ -0.24
PDPN-204ENST00000475043 TNS3Q68CZ2 1445 aa13.56□□□□□ -0.24
PDPN-204ENST00000475043 PRR36Q9H6K5 1346 aa13.55□□□□□ -0.24
PDPN-204ENST00000475043 NGDNQ8NEJ9 315 aaKnown RBP13.54□□□□□ -0.24
PDPN-204ENST00000475043 GPRASP1Q5JY77 1395 aa13.54□□□□□ -0.24
PDPN-204ENST00000475043 TRPM1Q7Z4N2 1603 aa13.53□□□□□ -0.24
PDPN-204ENST00000475043 RBM6P78332 1123 aaKnown RBP13.53□□□□□ -0.24
PDPN-204ENST00000475043 NUDT16Q96DE0 195 aaKnown RBP13.53□□□□□ -0.24
PDPN-204ENST00000475043 CDK19Q9BWU1 502 aa13.53□□□□□ -0.24
PDPN-204ENST00000475043 SBNO1A3KN83 1393 aa13.53□□□□□ -0.24
PDPN-204ENST00000475043 QRICH2Q9H0J4 1663 aa13.53□□□□□ -0.24
PDPN-204ENST00000475043 TRPM3Q9HCF6 1732 aaPredicted RBP13.53□□□□□ -0.24
PDPN-204ENST00000475043 FNBP4Q8N3X1 1017 aaPredicted RBP13.52□□□□□ -0.25
PDPN-204ENST00000475043 CABLES1Q8TDN4 633 aa13.52□□□□□ -0.25
PDPN-204ENST00000475043 ARHGEF10O15013 1369 aa13.52□□□□□ -0.25
PDPN-204ENST00000475043 ATP7BP35670 1465 aa13.52□□□□□ -0.25
PDPN-204ENST00000475043 ABCA3Q99758 1704 aa13.52□□□□□ -0.25
PDPN-204ENST00000475043 CDK12Q9NYV4 1490 aaPredicted RBP13.51□□□□□ -0.25
PDPN-204ENST00000475043 CENPJQ9HC77 1338 aaPredicted RBP13.51□□□□□ -0.25
PDPN-204ENST00000475043 PAK3O75914 559 aaPredicted RBP13.51□□□□□ -0.25
PDPN-204ENST00000475043 SPDYE1Q8NFV5 336 aaPredicted RBP13.51□□□□□ -0.25
PDPN-204ENST00000475043 TRPC5Q9UL62 973 aaPredicted RBP13.51□□□□□ -0.25
PDPN-204ENST00000475043 ALS2Q96Q42 1657 aa13.5□□□□□ -0.25
PDPN-204ENST00000475043 TOPAZ1Q8N9V7 1692 aa13.5□□□□□ -0.25
PDPN-204ENST00000475043 ROCK2O75116 1388 aaKnown RBP13.49□□□□□ -0.25
PDPN-204ENST00000475043 SRPK2P78362 688 aaKnown RBP13.49□□□□□ -0.25
PDPN-204ENST00000475043 BCL9LQ86UU0 1499 aa13.48□□□□□ -0.25
PDPN-204ENST00000475043 RGS12O14924 1447 aa13.48□□□□□ -0.25
PDPN-204ENST00000475043 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.48□□□□□ -0.25
PDPN-204ENST00000475043 ATRNO75882 1429 aa13.47□□□□□ -0.25
PDPN-204ENST00000475043 TONSLQ96HA7 1378 aa13.47□□□□□ -0.25
PDPN-204ENST00000475043 PLCH1Q4KWH8 1693 aa13.47□□□□□ -0.25
PDPN-204ENST00000475043 CCDC61Q9Y6R9 512 aa13.47□□□□□ -0.25
PDPN-204ENST00000475043 ACEP12821 1306 aa13.46□□□□□ -0.25
PDPN-204ENST00000475043 CABP2Q9NPB3 220 aa13.46□□□□□ -0.25
PDPN-204ENST00000475043 CLEC11AQ9Y240 323 aa13.46□□□□□ -0.25
PDPN-204ENST00000475043 SLIT2O94813 1529 aa13.45□□□□□ -0.26
PDPN-204ENST00000475043 NWD2Q9ULI1 1742 aa13.45□□□□□ -0.26
PDPN-204ENST00000475043 NBPF8Q3BBV2 869 aa13.45□□□□□ -0.26
PDPN-204ENST00000475043 UNC5CLQ8IV45 518 aa13.45□□□□□ -0.26
PDPN-204ENST00000475043 PPIP5K1Q6PFW1 1433 aa13.45□□□□□ -0.26
PDPN-204ENST00000475043 UPF1Q92900 1129 aaKnown RBP eCLIP13.44□□□□□ -0.26
PDPN-204ENST00000475043 GJD4Q96KN9 370 aaPredicted RBP13.44□□□□□ -0.26
PDPN-204ENST00000475043 CRYBG1Q9Y4K1 1723 aa13.44□□□□□ -0.26
PDPN-204ENST00000475043 POLR3AO14802 1390 aaPredicted RBP13.44□□□□□ -0.26
PDPN-204ENST00000475043 PLEKHG3A1L390 1219 aa13.43□□□□□ -0.26
PDPN-204ENST00000475043 CCDC9Q9Y3X0 531 aaKnown RBP13.43□□□□□ -0.26
PDPN-204ENST00000475043 EVC2Q86UK5 1308 aa13.42□□□□□ -0.26
PDPN-204ENST00000475043 FAM83GA6ND36 823 aa13.42□□□□□ -0.26
PDPN-204ENST00000475043 NUTM2GQ5VZR2 741 aa13.42□□□□□ -0.26
PDPN-204ENST00000475043 COL14A1Q05707 1796 aaKnown RBP13.42□□□□□ -0.26
PDPN-204ENST00000475043 PHRF1Q9P1Y6 1649 aaKnown RBP13.42□□□□□ -0.26
PDPN-204ENST00000475043 CARD11Q9BXL7 1154 aa13.41□□□□□ -0.26
PDPN-204ENST00000475043 RALGAPBQ86X10 1494 aa13.41□□□□□ -0.26
PDPN-204ENST00000475043 GLI3P10071 1580 aa13.41□□□□□ -0.26
PDPN-204ENST00000475043 ABTB2Q8N961 1025 aa13.4□□□□□ -0.26
PDPN-204ENST00000475043 BTG4Q9NY30 223 aa13.4□□□□□ -0.26
PDPN-204ENST00000475043 CABP1Q9NZU7 370 aa13.4□□□□□ -0.26
PDPN-204ENST00000475043 NRAPQ86VF7 1730 aa13.39□□□□□ -0.27
PDPN-204ENST00000475043 VPS72Q15906 364 aa13.39□□□□□ -0.27
PDPN-204ENST00000475043 PRDM11Q9NQV5 511 aa13.39□□□□□ -0.27
PDPN-204ENST00000475043 ATAD2Q6PL18 1390 aa13.39□□□□□ -0.27
PDPN-204ENST00000475043 BRWD3Q6RI45 1802 aa13.37□□□□□ -0.27
PDPN-204ENST00000475043 A0A0G2JS52 829 aa13.37□□□□□ -0.27
PDPN-204ENST00000475043 ZC3H6P61129 1189 aaKnown RBP13.37□□□□□ -0.27
PDPN-204ENST00000475043 MYT1Q01538 1121 aa13.37□□□□□ -0.27
PDPN-204ENST00000475043 KIAA0232Q92628 1395 aa13.36□□□□□ -0.27
PDPN-204ENST00000475043 CHRNA2Q15822 529 aa13.36□□□□□ -0.27
PDPN-204ENST00000475043 PCGF6Q9BYE7 350 aa13.36□□□□□ -0.27
PDPN-204ENST00000475043 USP6P35125 1406 aa13.36□□□□□ -0.27
PDPN-204ENST00000475043 AKAP12Q02952 1782 aa13.35□□□□□ -0.27
PDPN-204ENST00000475043 NLRP13Q86W25 1043 aa13.35□□□□□ -0.27
PDPN-204ENST00000475043 SEPT12Q8IYM1 358 aa13.35□□□□□ -0.27
PDPN-204ENST00000475043 NRKQ7Z2Y5 1582 aa13.35□□□□□ -0.27
PDPN-204ENST00000475043 BRD4O60885 1362 aaPredicted RBP13.33□□□□□ -0.27
PDPN-204ENST00000475043 PRKAR2AP13861 404 aaKnown RBP13.33□□□□□ -0.28
PDPN-204ENST00000475043 NLRP6P59044 892 aa13.33□□□□□ -0.28
PDPN-204ENST00000475043 FAM98CQ17RN3 349 aaKnown RBP13.33□□□□□ -0.28
PDPN-204ENST00000475043 STRN4Q9NRL3 753 aa13.33□□□□□ -0.28
PDPN-204ENST00000475043 SBNO2Q9Y2G9 1366 aa13.32□□□□□ -0.28
PDPN-204ENST00000475043 PIK3C2AO00443 1686 aa13.32□□□□□ -0.28
PDPN-204ENST00000475043 HAX1O00165 279 aa13.32□□□□□ -0.28
PDPN-204ENST00000475043 GCP02774 474 aa13.32□□□□□ -0.28
PDPN-204ENST00000475043 USP19O94966 1318 aa13.32□□□□□ -0.28
PDPN-204ENST00000475043 ZBTB7CA1YPR0 619 aa13.31□□□□□ -0.28
PDPN-204ENST00000475043 EVA1CP58658 441 aa13.31□□□□□ -0.28
PDPN-204ENST00000475043 SP7Q8TDD2 431 aaPredicted RBP13.31□□□□□ -0.28
PDPN-204ENST00000475043 TMC1Q8TDI8 760 aa13.31□□□□□ -0.28
PDPN-204ENST00000475043 SPATA31A5Q5VU36 1347 aa13.31□□□□□ -0.28
PDPN-204ENST00000475043 SPATA31A7Q8IWB4 1347 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms