RNA–Protein interactions for RNA: ENST00000474956.1

RNF220-211, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 3,303 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-211ENST00000474956 PHF23Q9BUL5 403 aaPredicted RBP16.11■□□□□ 0.17
RNF220-211ENST00000474956 LAS1LQ9Y4W2 734 aaKnown RBP16.11■□□□□ 0.17
RNF220-211ENST00000474956 COL3A1P02461 1466 aaPredicted RBP16.1■□□□□ 0.17
RNF220-211ENST00000474956 HDGFL2Q7Z4V5 671 aaPredicted RBP16.1■□□□□ 0.17
RNF220-211ENST00000474956 PLEKHF1Q96S99 279 aa16.1■□□□□ 0.17
RNF220-211ENST00000474956 IGHDP01880 384 aa16.09■□□□□ 0.17
RNF220-211ENST00000474956 CANXP27824 592 aaKnown RBP16.09■□□□□ 0.17
RNF220-211ENST00000474956 LTKP29376 864 aa16.09■□□□□ 0.17
RNF220-211ENST00000474956 RGS3P49796 1198 aa16.09■□□□□ 0.17
RNF220-211ENST00000474956 RARSP54136 660 aaKnown RBP16.09■□□□□ 0.17
RNF220-211ENST00000474956 EMILIN1Q9Y6C2 1016 aa16.09■□□□□ 0.17
RNF220-211ENST00000474956 NSD2O96028 1365 aa16.09■□□□□ 0.17
RNF220-211ENST00000474956 SLC26A8Q96RN1 970 aa16.08■□□□□ 0.16
RNF220-211ENST00000474956 HMOX1P09601 288 aa16.07■□□□□ 0.16
RNF220-211ENST00000474956 PPP6R1Q9UPN7 881 aa16.07■□□□□ 0.16
RNF220-211ENST00000474956 TRIM35Q9UPQ4 493 aa16.07■□□□□ 0.16
RNF220-211ENST00000474956 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.07■□□□□ 0.16
RNF220-211ENST00000474956 WASLO00401 505 aaPredicted RBP16.07■□□□□ 0.16
RNF220-211ENST00000474956 POLKQ9UBT6 870 aa16.07■□□□□ 0.16
RNF220-211ENST00000474956 TNRQ92752 1358 aa16.06■□□□□ 0.16
RNF220-211ENST00000474956 TMPOP42166 694 aaKnown RBP16.06■□□□□ 0.16
RNF220-211ENST00000474956 RRS1Q15050 365 aaKnown RBP16.06■□□□□ 0.16
RNF220-211ENST00000474956 PRR36Q9H6K5 1346 aa16.05■□□□□ 0.16
RNF220-211ENST00000474956 PPIP5K1Q6PFW1 1433 aa16.05■□□□□ 0.16
RNF220-211ENST00000474956 PRKCSHP14314 528 aaPredicted RBP16.05■□□□□ 0.16
RNF220-211ENST00000474956 THUMPD2Q9BTF0 503 aaKnown RBP16.05■□□□□ 0.16
RNF220-211ENST00000474956 NUDT16Q96DE0 195 aaKnown RBP16.05■□□□□ 0.16
RNF220-211ENST00000474956 ROBO2Q9HCK4 1378 aa16.05■□□□□ 0.16
RNF220-211ENST00000474956 NINLQ9Y2I6 1382 aa16.05■□□□□ 0.16
RNF220-211ENST00000474956 KIF20BQ96Q89 1820 aa16.04■□□□□ 0.16
RNF220-211ENST00000474956 DIAPH1O60610 1272 aaKnown RBP16.04■□□□□ 0.16
RNF220-211ENST00000474956 PHACTR3Q96KR7 559 aa16.04■□□□□ 0.16
RNF220-211ENST00000474956 ANKRD26Q9UPS8 1709 aa16.04■□□□□ 0.16
RNF220-211ENST00000474956 EXOSC9Q06265 439 aaKnown RBP16.03■□□□□ 0.16
RNF220-211ENST00000474956 CENPQQ7L2Z9 268 aaPredicted RBP16.03■□□□□ 0.16
RNF220-211ENST00000474956 MAP2P11137 1827 aaKnown RBP16.03■□□□□ 0.16
RNF220-211ENST00000474956 CPS1P31327 1500 aa16.03■□□□□ 0.16
RNF220-211ENST00000474956 WDR63Q8IWG1 891 aa16.03■□□□□ 0.16
RNF220-211ENST00000474956 ADGRB2O60241 1585 aa16.03■□□□□ 0.16
RNF220-211ENST00000474956 RIPK4P57078 832 aa16.02■□□□□ 0.16
RNF220-211ENST00000474956 SOX12O15370 315 aa16.02■□□□□ 0.15
RNF220-211ENST00000474956 PRKAR2BP31323 418 aa16.02■□□□□ 0.15
RNF220-211ENST00000474956 TMEM2Q9UHN6 1383 aa16.01■□□□□ 0.15
RNF220-211ENST00000474956 MAPK8IP3Q9UPT6 1336 aa16.01■□□□□ 0.15
RNF220-211ENST00000474956 UBR1Q8IWV7 1749 aa16.01■□□□□ 0.15
RNF220-211ENST00000474956 DLC1Q96QB1 1528 aa16.01■□□□□ 0.15
RNF220-211ENST00000474956 CCDC27Q2M243 656 aa16■□□□□ 0.15
RNF220-211ENST00000474956 PCDHB15Q9Y5E8 787 aa16■□□□□ 0.15
RNF220-211ENST00000474956 LRRC7Q96NW7 1537 aa15.99■□□□□ 0.15
RNF220-211ENST00000474956 ADAMTS13Q76LX8 1427 aa15.99■□□□□ 0.15
RNF220-211ENST00000474956 PNPLA6Q8IY17 1366 aa15.99■□□□□ 0.15
RNF220-211ENST00000474956 NGEFQ8N5V2 710 aa15.99■□□□□ 0.15
RNF220-211ENST00000474956 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.99■□□□□ 0.15
RNF220-211ENST00000474956 CPSF1Q10570 1443 aaKnown RBP15.98■□□□□ 0.15
RNF220-211ENST00000474956 IL27Q8NEV9 243 aa15.98■□□□□ 0.15
RNF220-211ENST00000474956 RSPH6AQ9H0K4 717 aa15.98■□□□□ 0.15
RNF220-211ENST00000474956 DAXXQ9UER7 740 aaPredicted RBP15.97■□□□□ 0.15
RNF220-211ENST00000474956 FAM161AQ3B820 660 aa15.97■□□□□ 0.15
RNF220-211ENST00000474956 MED14O60244 1454 aa15.97■□□□□ 0.15
RNF220-211ENST00000474956 PDE3AQ14432 1141 aa15.97■□□□□ 0.15
RNF220-211ENST00000474956 SSH1Q8WYL5 1049 aa15.97■□□□□ 0.15
RNF220-211ENST00000474956 MYH16Q9H6N6 1097 aa15.97■□□□□ 0.15
RNF220-211ENST00000474956 CCDC61Q9Y6R9 512 aa15.97■□□□□ 0.15
RNF220-211ENST00000474956 ATP7BP35670 1465 aa15.97■□□□□ 0.15
RNF220-211ENST00000474956 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.97■□□□□ 0.15
RNF220-211ENST00000474956 PTPRUQ92729 1446 aa15.96■□□□□ 0.15
RNF220-211ENST00000474956 SLC4A3P48751 1232 aa15.96■□□□□ 0.15
RNF220-211ENST00000474956 C8orf34Q49A92 452 aa15.96■□□□□ 0.15
RNF220-211ENST00000474956 FAM83GA6ND36 823 aa15.95■□□□□ 0.14
RNF220-211ENST00000474956 PMFBP1Q8TBY8 1022 aa15.95■□□□□ 0.14
RNF220-211ENST00000474956 SMC4Q9NTJ3 1288 aa15.95■□□□□ 0.14
RNF220-211ENST00000474956 ELL2O00472 640 aaPredicted RBP15.95■□□□□ 0.14
RNF220-211ENST00000474956 DCTN1Q14203 1278 aa15.94■□□□□ 0.14
RNF220-211ENST00000474956 RBM33Q96EV2 1170 aaKnown RBP15.94■□□□□ 0.14
RNF220-211ENST00000474956 TRHP20396 242 aaPredicted RBP15.94■□□□□ 0.14
RNF220-211ENST00000474956 NFKBIBQ15653 356 aa15.94■□□□□ 0.14
RNF220-211ENST00000474956 IL13P35225 146 aa15.94■□□□□ 0.14
RNF220-211ENST00000474956 GSE1Q14687 1217 aa15.94■□□□□ 0.14
RNF220-211ENST00000474956 AEBP1Q8IUX7 1158 aa15.94■□□□□ 0.14
RNF220-211ENST00000474956 EDC4Q6P2E9 1401 aaKnown RBP15.93■□□□□ 0.14
RNF220-211ENST00000474956 ACEP12821 1306 aa15.93■□□□□ 0.14
RNF220-211ENST00000474956 TRIM27P14373 513 aa15.93■□□□□ 0.14
RNF220-211ENST00000474956 COG3Q96JB2 828 aa15.92■□□□□ 0.14
RNF220-211ENST00000474956 CDC42BPGQ6DT37 1551 aa15.92■□□□□ 0.14
RNF220-211ENST00000474956 TSPYL6Q8N831 410 aa15.92■□□□□ 0.14
RNF220-211ENST00000474956 NOB1Q9ULX3 412 aaKnown RBP15.92■□□□□ 0.14
RNF220-211ENST00000474956 FAM135BQ49AJ0 1406 aa15.91■□□□□ 0.14
RNF220-211ENST00000474956 AMOTL2Q9Y2J4 779 aa15.91■□□□□ 0.14
RNF220-211ENST00000474956 TECPR2O15040 1411 aa15.91■□□□□ 0.14
RNF220-211ENST00000474956 FCHSD2O94868 740 aa15.91■□□□□ 0.14
RNF220-211ENST00000474956 C3P01024 1663 aa15.9■□□□□ 0.14
RNF220-211ENST00000474956 SEC24BO95487 1268 aa15.9■□□□□ 0.14
RNF220-211ENST00000474956 KNDC1Q76NI1 1749 aa15.89■□□□□ 0.13
RNF220-211ENST00000474956 MON2Q7Z3U7 1717 aa15.89■□□□□ 0.13
RNF220-211ENST00000474956 FTSJ3Q8IY81 847 aaKnown RBP15.89■□□□□ 0.13
RNF220-211ENST00000474956 HDGFP51858 240 aaKnown RBP15.89■□□□□ 0.13
RNF220-211ENST00000474956 ZKSCAN2Q63HK3 967 aa15.89■□□□□ 0.13
RNF220-211ENST00000474956 DZIP1LQ8IYY4 767 aaKnown RBP15.88■□□□□ 0.13
RNF220-211ENST00000474956 MVPQ14764 893 aaKnown RBP15.88■□□□□ 0.13
RNF220-211ENST00000474956 HSP90AB2PQ58FF8 381 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms