RNA–Protein interactions for RNA: ENST00000474911.5

RTN1-205, Transcript of reticulon 1, humanhuman

TSL 2

Gene RTN1, Length 1,412 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-205ENST00000474911 PLEKHG3A1L390 1219 aa18.69■□□□□ 0.58
RTN1-205ENST00000474911 TESK2Q96S53 571 aa18.69■□□□□ 0.58
RTN1-205ENST00000474911 SLC24A1O60721 1099 aa18.68■□□□□ 0.58
RTN1-205ENST00000474911 RXRBP28702 533 aa18.68■□□□□ 0.58
RTN1-205ENST00000474911 SRPK2P78362 688 aaKnown RBP18.68■□□□□ 0.58
RTN1-205ENST00000474911 DIEXFQ68CQ4 756 aaKnown RBP18.68■□□□□ 0.58
RTN1-205ENST00000474911 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.68■□□□□ 0.58
RTN1-205ENST00000474911 SBNO2Q9Y2G9 1366 aa18.68■□□□□ 0.58
RTN1-205ENST00000474911 KIF7Q2M1P5 1343 aa18.67■□□□□ 0.58
RTN1-205ENST00000474911 C11orf95C9JLR9 678 aaPredicted RBP18.67■□□□□ 0.58
RTN1-205ENST00000474911 USP21Q9UK80 565 aa18.67■□□□□ 0.58
RTN1-205ENST00000474911 CRYBG1Q9Y4K1 1723 aa18.67■□□□□ 0.58
RTN1-205ENST00000474911 EVC2Q86UK5 1308 aa18.67■□□□□ 0.58
RTN1-205ENST00000474911 QTRT2Q9H974 415 aaKnown RBP18.66■□□□□ 0.58
RTN1-205ENST00000474911 ACEP12821 1306 aa18.66■□□□□ 0.58
RTN1-205ENST00000474911 TMF1P82094 1093 aa18.66■□□□□ 0.58
RTN1-205ENST00000474911 LMOD2Q6P5Q4 547 aa18.66■□□□□ 0.58
RTN1-205ENST00000474911 CABP2Q9NPB3 220 aa18.66■□□□□ 0.58
RTN1-205ENST00000474911 PPIP5K1Q6PFW1 1433 aa18.65■□□□□ 0.58
RTN1-205ENST00000474911 BCL9LQ86UU0 1499 aa18.65■□□□□ 0.58
RTN1-205ENST00000474911 RBM6P78332 1123 aaKnown RBP18.65■□□□□ 0.58
RTN1-205ENST00000474911 SLIT2O94813 1529 aa18.64■□□□□ 0.57
RTN1-205ENST00000474911 HAP1P54257 671 aaPredicted RBP18.64■□□□□ 0.57
RTN1-205ENST00000474911 CABLES1Q8TDN4 633 aa18.64■□□□□ 0.57
RTN1-205ENST00000474911 TRPC5Q9UL62 973 aaPredicted RBP18.64■□□□□ 0.57
RTN1-205ENST00000474911 NWD2Q9ULI1 1742 aa18.64■□□□□ 0.57
RTN1-205ENST00000474911 ATRNO75882 1429 aa18.63■□□□□ 0.57
RTN1-205ENST00000474911 PLCH1Q4KWH8 1693 aa18.62■□□□□ 0.57
RTN1-205ENST00000474911 PAK3O75914 559 aaPredicted RBP18.62■□□□□ 0.57
RTN1-205ENST00000474911 DDX10Q13206 875 aaKnown RBP18.62■□□□□ 0.57
RTN1-205ENST00000474911 BRD4O60885 1362 aaPredicted RBP18.62■□□□□ 0.57
RTN1-205ENST00000474911 CDCA8Q53HL2 280 aa18.61■□□□□ 0.57
RTN1-205ENST00000474911 PHRF1Q9P1Y6 1649 aaKnown RBP18.6■□□□□ 0.57
RTN1-205ENST00000474911 ATAD2Q6PL18 1390 aa18.58■□□□□ 0.57
RTN1-205ENST00000474911 UNC5CLQ8IV45 518 aa18.58■□□□□ 0.57
RTN1-205ENST00000474911 CABP1Q9NZU7 370 aa18.58■□□□□ 0.57
RTN1-205ENST00000474911 RGS12O14924 1447 aa18.58■□□□□ 0.57
RTN1-205ENST00000474911 AKAP12Q02952 1782 aa18.58■□□□□ 0.56
RTN1-205ENST00000474911 COL14A1Q05707 1796 aaKnown RBP18.58■□□□□ 0.56
RTN1-205ENST00000474911 POLR3GLQ9BT43 218 aa18.57■□□□□ 0.56
RTN1-205ENST00000474911 USP6P35125 1406 aa18.57■□□□□ 0.56
RTN1-205ENST00000474911 PLEKHG5O94827 1062 aa18.56■□□□□ 0.56
RTN1-205ENST00000474911 NRAPQ86VF7 1730 aa18.55■□□□□ 0.56
RTN1-205ENST00000474911 FAM83GA6ND36 823 aa18.55■□□□□ 0.56
RTN1-205ENST00000474911 GJD4Q96KN9 370 aaPredicted RBP18.55■□□□□ 0.56
RTN1-205ENST00000474911 SSH2Q76I76 1423 aa18.54■□□□□ 0.56
RTN1-205ENST00000474911 ABTB2Q8N961 1025 aa18.54■□□□□ 0.56
RTN1-205ENST00000474911 PUS7Q96PZ0 661 aaKnown RBP18.54■□□□□ 0.56
RTN1-205ENST00000474911 ZNF692Q9BU19 519 aaPredicted RBP18.54■□□□□ 0.56
RTN1-205ENST00000474911 GLI3P10071 1580 aa18.53■□□□□ 0.56
RTN1-205ENST00000474911 NRKQ7Z2Y5 1582 aa18.53■□□□□ 0.56
RTN1-205ENST00000474911 MYOM1P52179 1685 aa18.53■□□□□ 0.56
RTN1-205ENST00000474911 CPSF1Q10570 1443 aaKnown RBP18.52■□□□□ 0.56
RTN1-205ENST00000474911 USP19O94966 1318 aa18.52■□□□□ 0.56
RTN1-205ENST00000474911 MON2Q7Z3U7 1717 aa18.52■□□□□ 0.55
RTN1-205ENST00000474911 VPS72Q15906 364 aa18.51■□□□□ 0.55
RTN1-205ENST00000474911 NLRP13Q86W25 1043 aa18.51■□□□□ 0.55
RTN1-205ENST00000474911 PIK3C2AO00443 1686 aa18.5■□□□□ 0.55
RTN1-205ENST00000474911 NUTM2GQ5VZR2 741 aa18.5■□□□□ 0.55
RTN1-205ENST00000474911 PRDM11Q9NQV5 511 aa18.49■□□□□ 0.55
RTN1-205ENST00000474911 BTG4Q9NY30 223 aa18.49■□□□□ 0.55
RTN1-205ENST00000474911 KIAA0232Q92628 1395 aa18.48■□□□□ 0.55
RTN1-205ENST00000474911 SLIT3O75094 1523 aa18.48■□□□□ 0.55
RTN1-205ENST00000474911 CPDO75976 1380 aa18.48■□□□□ 0.55
RTN1-205ENST00000474911 CD163L1Q9NR16 1453 aa18.47■□□□□ 0.55
RTN1-205ENST00000474911 TTC21AQ8NDW8 1320 aa18.47■□□□□ 0.55
RTN1-205ENST00000474911 KTN1Q86UP2 1357 aaKnown RBP18.46■□□□□ 0.55
RTN1-205ENST00000474911 TTC21BQ7Z4L5 1316 aa18.46■□□□□ 0.55
RTN1-205ENST00000474911 UPF1Q92900 1129 aaKnown RBP eCLIP18.46■□□□□ 0.55
RTN1-205ENST00000474911 NINLQ9Y2I6 1382 aa18.45■□□□□ 0.54
RTN1-205ENST00000474911 LMO7Q8WWI1 1683 aa18.45■□□□□ 0.54
RTN1-205ENST00000474911 ONECUT3O60422 494 aaPredicted RBP18.45■□□□□ 0.54
RTN1-205ENST00000474911 GCP02774 474 aa18.45■□□□□ 0.54
RTN1-205ENST00000474911 NLRP6P59044 892 aa18.45■□□□□ 0.54
RTN1-205ENST00000474911 ZC3H6P61129 1189 aaKnown RBP18.45■□□□□ 0.54
RTN1-205ENST00000474911 BRWD3Q6RI45 1802 aa18.44■□□□□ 0.54
RTN1-205ENST00000474911 USP54Q70EL1 1684 aa18.44■□□□□ 0.54
RTN1-205ENST00000474911 TMC1Q8TDI8 760 aa18.42■□□□□ 0.54
RTN1-205ENST00000474911 SLC12A5Q9H2X9 1139 aa18.42■□□□□ 0.54
RTN1-205ENST00000474911 CCDC9Q9Y3X0 531 aaKnown RBP18.42■□□□□ 0.54
RTN1-205ENST00000474911 ANP32CO43423 234 aa18.41■□□□□ 0.54
RTN1-205ENST00000474911 CHRNA2Q15822 529 aa18.41■□□□□ 0.54
RTN1-205ENST00000474911 HDGFL2Q7Z4V5 671 aaPredicted RBP18.41■□□□□ 0.54
RTN1-205ENST00000474911 TERF2IPQ9NYB0 399 aa18.41■□□□□ 0.54
RTN1-205ENST00000474911 CAMTA1Q9Y6Y1 1673 aa18.41■□□□□ 0.54
RTN1-205ENST00000474911 SPATA31A5Q5VU36 1347 aa18.41■□□□□ 0.54
RTN1-205ENST00000474911 SPATA31A7Q8IWB4 1347 aa18.41■□□□□ 0.54
RTN1-205ENST00000474911 EDC4Q6P2E9 1401 aaKnown RBP18.4■□□□□ 0.54
RTN1-205ENST00000474911 MIER1Q8N108 512 aa18.4■□□□□ 0.54
RTN1-205ENST00000474911 PANK3Q9H999 370 aa18.4■□□□□ 0.54
RTN1-205ENST00000474911 KCNH5Q8NCM2 988 aa18.4■□□□□ 0.54
RTN1-205ENST00000474911 A0A1W2PP64 1363 aa18.39■□□□□ 0.54
RTN1-205ENST00000474911 COL18A1P39060 1754 aa18.39■□□□□ 0.53
RTN1-205ENST00000474911 SEPT12Q8IYM1 358 aa18.39■□□□□ 0.53
RTN1-205ENST00000474911 USP31Q70CQ4 1352 aa18.39■□□□□ 0.53
RTN1-205ENST00000474911 THSD7AQ9UPZ6 1657 aa18.38■□□□□ 0.53
RTN1-205ENST00000474911 SPATA31A1Q5TZJ5 1347 aa18.37■□□□□ 0.53
RTN1-205ENST00000474911 AATKQ6ZMQ8 1374 aa18.37■□□□□ 0.53
RTN1-205ENST00000474911 COL5A2P05997 1499 aaPredicted RBP18.36■□□□□ 0.53
RTN1-205ENST00000474911 NFAT5O94916 1531 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms