RNA–Protein interactions for RNA: ENST00000474409.1

CNN3-205, Transcript of calponin 3, humanhuman

TSL 3

Gene CNN3, Length 544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-205ENST00000474409 SHPRHQ149N8 1683 aa11.41□□□□□ -0.58
CNN3-205ENST00000474409 SLAIN2Q9P270 581 aa11.41□□□□□ -0.58
CNN3-205ENST00000474409 CGNL1Q0VF96 1302 aa11.4□□□□□ -0.58
CNN3-205ENST00000474409 CNGB1Q14028 1251 aaPredicted RBP11.4□□□□□ -0.58
CNN3-205ENST00000474409 CERKQ8TCT0 537 aa11.4□□□□□ -0.58
CNN3-205ENST00000474409 ZNF692Q9BU19 519 aaPredicted RBP11.4□□□□□ -0.58
CNN3-205ENST00000474409 BRD4O60885 1362 aaPredicted RBP11.4□□□□□ -0.59
CNN3-205ENST00000474409 NPHP3Q7Z494 1330 aa11.39□□□□□ -0.59
CNN3-205ENST00000474409 COL22A1Q8NFW1 1626 aaPredicted RBP11.39□□□□□ -0.59
CNN3-205ENST00000474409 TOM1O60784 492 aa11.39□□□□□ -0.59
CNN3-205ENST00000474409 MED1Q15648 1581 aaPredicted RBP11.39□□□□□ -0.59
CNN3-205ENST00000474409 BRINP3Q76B58 766 aa11.39□□□□□ -0.59
CNN3-205ENST00000474409 SCAF1Q9H7N4 1312 aaKnown RBP11.38□□□□□ -0.59
CNN3-205ENST00000474409 TNS3Q68CZ2 1445 aa11.38□□□□□ -0.59
CNN3-205ENST00000474409 SSH2Q76I76 1423 aa11.38□□□□□ -0.59
CNN3-205ENST00000474409 UBAP1LF5GYI3 381 aa11.38□□□□□ -0.59
CNN3-205ENST00000474409 ANP32CO43423 234 aa11.38□□□□□ -0.59
CNN3-205ENST00000474409 PSME1Q06323 249 aa11.38□□□□□ -0.59
CNN3-205ENST00000474409 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.38□□□□□ -0.591e-11■□□□□ 10.4
CNN3-205ENST00000474409 CARD14Q9BXL6 1004 aa11.38□□□□□ -0.59
CNN3-205ENST00000474409 NPC1L1Q9UHC9 1359 aa11.38□□□□□ -0.59
CNN3-205ENST00000474409 TTC21AQ8NDW8 1320 aa11.37□□□□□ -0.59
CNN3-205ENST00000474409 PER1O15534 1290 aaPredicted RBP11.37□□□□□ -0.59
CNN3-205ENST00000474409 FOXO3O43524 673 aa11.37□□□□□ -0.59
CNN3-205ENST00000474409 PAK3O75914 559 aaPredicted RBP11.37□□□□□ -0.59
CNN3-205ENST00000474409 CC2D1BQ5T0F9 858 aaKnown RBP11.37□□□□□ -0.59
CNN3-205ENST00000474409 TTC21BQ7Z4L5 1316 aa11.36□□□□□ -0.59
CNN3-205ENST00000474409 OVOS2A0A0J9YW53 1432 aa11.36□□□□□ -0.59
CNN3-205ENST00000474409 OVOS2Q6IE36 1432 aa11.36□□□□□ -0.59
CNN3-205ENST00000474409 XPCQ01831 940 aaPredicted RBP11.36□□□□□ -0.59
CNN3-205ENST00000474409 PARD3Q8TEW0 1356 aa11.36□□□□□ -0.59
CNN3-205ENST00000474409 SLIT3O75094 1523 aa11.35□□□□□ -0.59
CNN3-205ENST00000474409 PEAK1Q9H792 1746 aa11.35□□□□□ -0.59
CNN3-205ENST00000474409 PIP4K2BP78356 416 aa11.35□□□□□ -0.59
CNN3-205ENST00000474409 AMER1Q5JTC6 1135 aaPredicted RBP11.35□□□□□ -0.59
CNN3-205ENST00000474409 DDX17Q92841 729 aaKnown RBP11.35□□□□□ -0.59
CNN3-205ENST00000474409 SBNO1A3KN83 1393 aa11.35□□□□□ -0.59
CNN3-205ENST00000474409 FAM208AQ9UK61 1670 aaKnown RBP11.35□□□□□ -0.59
CNN3-205ENST00000474409 RGPD2P0DJD1 1756 aa11.35□□□□□ -0.59
CNN3-205ENST00000474409 KRT28Q7Z3Y7 464 aa11.34□□□□□ -0.59
CNN3-205ENST00000474409 NME9Q86XW9 330 aa11.34□□□□□ -0.59
CNN3-205ENST00000474409 GGNBP2Q9H3C7 697 aa11.34□□□□□ -0.59
CNN3-205ENST00000474409 PLCH1Q4KWH8 1693 aa11.33□□□□□ -0.6
CNN3-205ENST00000474409 ARHGEF10O15013 1369 aa11.33□□□□□ -0.6
CNN3-205ENST00000474409 LMOD2Q6P5Q4 547 aa11.33□□□□□ -0.6
CNN3-205ENST00000474409 NFAT5O94916 1531 aa11.33□□□□□ -0.6
CNN3-205ENST00000474409 FYB1O15117 783 aa11.32□□□□□ -0.6
CNN3-205ENST00000474409 MORC1Q86VD1 984 aa11.32□□□□□ -0.6
CNN3-205ENST00000474409 ABTB2Q8N961 1025 aa11.32□□□□□ -0.6
CNN3-205ENST00000474409 COG3Q96JB2 828 aa11.32□□□□□ -0.6
CNN3-205ENST00000474409 PRKRIP1Q9H875 184 aaPredicted RBP11.32□□□□□ -0.6
CNN3-205ENST00000474409 VIRMAQ69YN4 1812 aaKnown RBP11.32□□□□□ -0.6
CNN3-205ENST00000474409 SOS2Q07890 1332 aaPredicted RBP11.32□□□□□ -0.6
CNN3-205ENST00000474409 USP31Q70CQ4 1352 aa11.31□□□□□ -0.6
CNN3-205ENST00000474409 RALBP1Q15311 655 aa11.31□□□□□ -0.6
CNN3-205ENST00000474409 MYBBP1AQ9BQG0 1328 aaKnown RBP11.31□□□□□ -0.6
CNN3-205ENST00000474409 COL18A1P39060 1754 aa11.31□□□□□ -0.6
CNN3-205ENST00000474409 NLRP6P59044 892 aa11.3□□□□□ -0.6
CNN3-205ENST00000474409 NUTM2GQ5VZR2 741 aa11.3□□□□□ -0.6
CNN3-205ENST00000474409 COL14A1Q05707 1796 aaKnown RBP11.3□□□□□ -0.6
CNN3-205ENST00000474409 SPATA31A3Q5VYP0 1347 aa11.3□□□□□ -0.6
CNN3-205ENST00000474409 WNK3Q9BYP7 1800 aa11.3□□□□□ -0.6
CNN3-205ENST00000474409 NWD2Q9ULI1 1742 aa11.29□□□□□ -0.6
CNN3-205ENST00000474409 TNNT2P45379 298 aaPredicted RBP11.29□□□□□ -0.6
CNN3-205ENST00000474409 ZRANB1Q9UGI0 708 aa11.29□□□□□ -0.6
CNN3-205ENST00000474409 CDK12Q9NYV4 1490 aaPredicted RBP11.29□□□□□ -0.6
CNN3-205ENST00000474409 ABCC6O95255 1503 aa11.29□□□□□ -0.6
CNN3-205ENST00000474409 SMG6Q86US8 1419 aaKnown RBP11.28□□□□□ -0.6
CNN3-205ENST00000474409 SOX12O15370 315 aa11.28□□□□□ -0.6
CNN3-205ENST00000474409 PLEKHG5O94827 1062 aa11.28□□□□□ -0.6
CNN3-205ENST00000474409 NLRP13Q86W25 1043 aa11.28□□□□□ -0.6
CNN3-205ENST00000474409 MIER1Q8N108 512 aa11.28□□□□□ -0.6
CNN3-205ENST00000474409 LMO7Q8WWI1 1683 aa11.27□□□□□ -0.6
CNN3-205ENST00000474409 RGPD1P0DJD0 1748 aa11.27□□□□□ -0.61
CNN3-205ENST00000474409 NRAPQ86VF7 1730 aa11.27□□□□□ -0.61
CNN3-205ENST00000474409 USP19O94966 1318 aa11.27□□□□□ -0.61
CNN3-205ENST00000474409 AATKQ6ZMQ8 1374 aa11.27□□□□□ -0.61
CNN3-205ENST00000474409 PNPLA6Q8IY17 1366 aa11.27□□□□□ -0.61
CNN3-205ENST00000474409 DLG5Q8TDM6 1919 aa11.27□□□□□ -0.61
CNN3-205ENST00000474409 LRRC59Q96AG4 307 aaKnown RBP11.26□□□□□ -0.61
CNN3-205ENST00000474409 CAMTA1Q9Y6Y1 1673 aa11.25□□□□□ -0.61
CNN3-205ENST00000474409 PPP2R1AP30153 589 aa11.25□□□□□ -0.61
CNN3-205ENST00000474409 HAP1P54257 671 aaPredicted RBP11.25□□□□□ -0.61
CNN3-205ENST00000474409 KCNH5Q8NCM2 988 aa11.25□□□□□ -0.61
CNN3-205ENST00000474409 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.25□□□□□ -0.61
CNN3-205ENST00000474409 COL3A1P02461 1466 aaPredicted RBP11.25□□□□□ -0.61
CNN3-205ENST00000474409 RTL1A6NKG5 1358 aa11.24□□□□□ -0.61
CNN3-205ENST00000474409 ZBTB7CA1YPR0 619 aa11.23□□□□□ -0.61
CNN3-205ENST00000474409 CCER2I3L3R5 266 aa11.23□□□□□ -0.61
CNN3-205ENST00000474409 RRS1Q15050 365 aaKnown RBP11.23□□□□□ -0.61
CNN3-205ENST00000474409 MRS2Q9HD23 443 aa11.23□□□□□ -0.61
CNN3-205ENST00000474409 FLT4P35916 1363 aa11.23□□□□□ -0.61
CNN3-205ENST00000474409 JCADQ9P266 1359 aa11.23□□□□□ -0.61
CNN3-205ENST00000474409 PARP4Q9UKK3 1724 aaKnown RBP11.23□□□□□ -0.61
CNN3-205ENST00000474409 PPM1GO15355 546 aaPredicted RBP11.22□□□□□ -0.61
CNN3-205ENST00000474409 CABLES1Q8TDN4 633 aa11.22□□□□□ -0.61
CNN3-205ENST00000474409 CFAP53Q96M91 514 aa11.22□□□□□ -0.61
CNN3-205ENST00000474409 KIF24Q5T7B8 1368 aa11.21□□□□□ -0.61
CNN3-205ENST00000474409 MAP3K19Q56UN5 1328 aa11.21□□□□□ -0.61
CNN3-205ENST00000474409 GCP02774 474 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms