RNA–Protein interactions for RNA: ENST00000474381.1

HLA-B-252, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 1,139 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-252ENST00000474381 ATAD2Q6PL18 1390 aa28.59■■■□□ 2.17
HLA-B-252ENST00000474381 QTRT2Q9H974 415 aaKnown RBP28.58■■■□□ 2.17
HLA-B-252ENST00000474381 CABP1Q9NZU7 370 aa28.58■■■□□ 2.17
HLA-B-252ENST00000474381 MARF1Q9Y4F3 1742 aaKnown RBP28.57■■■□□ 2.16
HLA-B-252ENST00000474381 SLC24A1O60721 1099 aa28.56■■■□□ 2.16
HLA-B-252ENST00000474381 CDK12Q9NYV4 1490 aaPredicted RBP28.55■■■□□ 2.16
HLA-B-252ENST00000474381 BCL9LQ86UU0 1499 aa28.54■■■□□ 2.16
HLA-B-252ENST00000474381 RBM6P78332 1123 aaKnown RBP28.54■■■□□ 2.16
HLA-B-252ENST00000474381 TRPC5Q9UL62 973 aaPredicted RBP28.54■■■□□ 2.16
HLA-B-252ENST00000474381 ABCA3Q99758 1704 aa28.54■■■□□ 2.16
HLA-B-252ENST00000474381 SLIT2O94813 1529 aa28.53■■■□□ 2.16
HLA-B-252ENST00000474381 PUS7Q96PZ0 661 aaKnown RBP28.52■■■□□ 2.16
HLA-B-252ENST00000474381 ATRNO75882 1429 aa28.52■■■□□ 2.16
HLA-B-252ENST00000474381 USP6P35125 1406 aa28.52■■■□□ 2.16
HLA-B-252ENST00000474381 ST20-MTHFSA0A0A6YYL1 179 aa28.5■■■□□ 2.15
HLA-B-252ENST00000474381 PLEKHG5O94827 1062 aa28.5■■■□□ 2.15
HLA-B-252ENST00000474381 TESK2Q96S53 571 aa28.5■■■□□ 2.15
HLA-B-252ENST00000474381 ZNF692Q9BU19 519 aaPredicted RBP28.5■■■□□ 2.15
HLA-B-252ENST00000474381 UNC5CLQ8IV45 518 aa28.48■■■□□ 2.15
HLA-B-252ENST00000474381 ABTB2Q8N961 1025 aa28.48■■■□□ 2.15
HLA-B-252ENST00000474381 USP47Q96K76 1375 aa28.48■■■□□ 2.15
HLA-B-252ENST00000474381 CRYBG1Q9Y4K1 1723 aa28.46■■■□□ 2.15
HLA-B-252ENST00000474381 SSH2Q76I76 1423 aa28.46■■■□□ 2.15
HLA-B-252ENST00000474381 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.46■■■□□ 2.15
HLA-B-252ENST00000474381 CPSF1Q10570 1443 aaKnown RBP28.45■■■□□ 2.15
HLA-B-252ENST00000474381 FAM83GA6ND36 823 aa28.44■■■□□ 2.14
HLA-B-252ENST00000474381 NLRP13Q86W25 1043 aa28.44■■■□□ 2.14
HLA-B-252ENST00000474381 USP19O94966 1318 aa28.43■■■□□ 2.14
HLA-B-252ENST00000474381 NUTM2GQ5VZR2 741 aa28.42■■■□□ 2.14
HLA-B-252ENST00000474381 NWD2Q9ULI1 1742 aa28.41■■■□□ 2.14
HLA-B-252ENST00000474381 GJD4Q96KN9 370 aaPredicted RBP28.41■■■□□ 2.14
HLA-B-252ENST00000474381 RGS12O14924 1447 aa28.41■■■□□ 2.14
HLA-B-252ENST00000474381 PHRF1Q9P1Y6 1649 aaKnown RBP28.4■■■□□ 2.14
HLA-B-252ENST00000474381 PLCH1Q4KWH8 1693 aa28.39■■■□□ 2.14
HLA-B-252ENST00000474381 PRDM11Q9NQV5 511 aa28.39■■■□□ 2.14
HLA-B-252ENST00000474381 COL14A1Q05707 1796 aaKnown RBP28.39■■■□□ 2.13
HLA-B-252ENST00000474381 TTC21AQ8NDW8 1320 aa28.39■■■□□ 2.13
HLA-B-252ENST00000474381 KTN1Q86UP2 1357 aaKnown RBP28.38■■■□□ 2.13
HLA-B-252ENST00000474381 NINLQ9Y2I6 1382 aa28.38■■■□□ 2.13
HLA-B-252ENST00000474381 VPS72Q15906 364 aa28.38■■■□□ 2.13
HLA-B-252ENST00000474381 TTC21BQ7Z4L5 1316 aa28.38■■■□□ 2.13
HLA-B-252ENST00000474381 KIAA0232Q92628 1395 aa28.37■■■□□ 2.13
HLA-B-252ENST00000474381 TMF1P82094 1093 aa28.36■■■□□ 2.13
HLA-B-252ENST00000474381 TMC1Q8TDI8 760 aa28.36■■■□□ 2.13
HLA-B-252ENST00000474381 AKAP12Q02952 1782 aa28.36■■■□□ 2.13
HLA-B-252ENST00000474381 CPDO75976 1380 aa28.36■■■□□ 2.13
HLA-B-252ENST00000474381 CD163L1Q9NR16 1453 aa28.35■■■□□ 2.13
HLA-B-252ENST00000474381 NLRP6P59044 892 aa28.35■■■□□ 2.13
HLA-B-252ENST00000474381 BTG4Q9NY30 223 aa28.35■■■□□ 2.13
HLA-B-252ENST00000474381 NRKQ7Z2Y5 1582 aa28.35■■■□□ 2.13
HLA-B-252ENST00000474381 GCP02774 474 aa28.34■■■□□ 2.13
HLA-B-252ENST00000474381 HDGFL2Q7Z4V5 671 aaPredicted RBP28.34■■■□□ 2.13
HLA-B-252ENST00000474381 SLC12A5Q9H2X9 1139 aa28.34■■■□□ 2.13
HLA-B-252ENST00000474381 TERF2IPQ9NYB0 399 aa28.34■■■□□ 2.13
HLA-B-252ENST00000474381 ZC3H6P61129 1189 aaKnown RBP28.32■■■□□ 2.12
HLA-B-252ENST00000474381 CDCA8Q53HL2 280 aa28.32■■■□□ 2.12
HLA-B-252ENST00000474381 SLIT3O75094 1523 aa28.32■■■□□ 2.12
HLA-B-252ENST00000474381 PIK3C2AO00443 1686 aa28.32■■■□□ 2.12
HLA-B-252ENST00000474381 MON2Q7Z3U7 1717 aa28.3■■■□□ 2.12
HLA-B-252ENST00000474381 GLI3P10071 1580 aa28.3■■■□□ 2.12
HLA-B-252ENST00000474381 NRAPQ86VF7 1730 aa28.29■■■□□ 2.12
HLA-B-252ENST00000474381 EDC4Q6P2E9 1401 aaKnown RBP28.29■■■□□ 2.12
HLA-B-252ENST00000474381 A0A1W2PP64 1363 aa28.28■■■□□ 2.12
HLA-B-252ENST00000474381 CHRNA2Q15822 529 aa28.27■■■□□ 2.12
HLA-B-252ENST00000474381 CCDC9Q9Y3X0 531 aaKnown RBP28.27■■■□□ 2.12
HLA-B-252ENST00000474381 USP31Q70CQ4 1352 aa28.25■■■□□ 2.11
HLA-B-252ENST00000474381 ONECUT3O60422 494 aaPredicted RBP28.25■■■□□ 2.11
HLA-B-252ENST00000474381 KCNH5Q8NCM2 988 aa28.25■■■□□ 2.11
HLA-B-252ENST00000474381 EIF4G2P78344 907 aaKnown RBP eCLIP28.23■■■□□ 2.11
HLA-B-252ENST00000474381 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.22■■■□□ 2.11
HLA-B-252ENST00000474381 AATKQ6ZMQ8 1374 aa28.22■■■□□ 2.11
HLA-B-252ENST00000474381 ANKRD36BQ8N2N9 1353 aa28.22■■■□□ 2.11
HLA-B-252ENST00000474381 SPATA31A5Q5VU36 1347 aa28.21■■■□□ 2.11
HLA-B-252ENST00000474381 SPATA31A7Q8IWB4 1347 aa28.21■■■□□ 2.11
HLA-B-252ENST00000474381 LMO7Q8WWI1 1683 aa28.21■■■□□ 2.11
HLA-B-252ENST00000474381 UPF1Q92900 1129 aaKnown RBP eCLIP28.2■■■□□ 2.1
HLA-B-252ENST00000474381 CAMTA1Q9Y6Y1 1673 aa28.19■■■□□ 2.1
HLA-B-252ENST00000474381 NME9Q86XW9 330 aa28.18■■■□□ 2.1
HLA-B-252ENST00000474381 USP54Q70EL1 1684 aa28.18■■■□□ 2.1
HLA-B-252ENST00000474381 ARHGEF25Q86VW2 580 aa28.17■■■□□ 2.1
HLA-B-252ENST00000474381 SEPT12Q8IYM1 358 aa28.17■■■□□ 2.1
HLA-B-252ENST00000474381 STRN4Q9NRL3 753 aa28.17■■■□□ 2.1
HLA-B-252ENST00000474381 EVA1CP58658 441 aa28.16■■■□□ 2.1
HLA-B-252ENST00000474381 SPATA31A1Q5TZJ5 1347 aa28.16■■■□□ 2.1
HLA-B-252ENST00000474381 NFAT5O94916 1531 aa28.15■■■□□ 2.1
HLA-B-252ENST00000474381 HSPA5P11021 654 aaKnown RBP28.14■■■□□ 2.1
HLA-B-252ENST00000474381 FAM98CQ17RN3 349 aaKnown RBP28.14■■■□□ 2.1
HLA-B-252ENST00000474381 ZRANB1Q9UGI0 708 aa28.14■■■□□ 2.1
HLA-B-252ENST00000474381 COL5A2P05997 1499 aaPredicted RBP28.14■■■□□ 2.09
HLA-B-252ENST00000474381 OVOS2A0A0J9YW53 1432 aa28.13■■■□□ 2.09
HLA-B-252ENST00000474381 OVOS2Q6IE36 1432 aa28.13■■■□□ 2.09
HLA-B-252ENST00000474381 ZBTB7CA1YPR0 619 aa28.11■■■□□ 2.09
HLA-B-252ENST00000474381 ABCC6O95255 1503 aa28.11■■■□□ 2.09
HLA-B-252ENST00000474381 SOX12O15370 315 aa28.1■■■□□ 2.09
HLA-B-252ENST00000474381 LARP1Q6PKG0 1096 aaKnown RBP28.1■■■□□ 2.09
HLA-B-252ENST00000474381 A0A0G2JS52 829 aa28.08■■■□□ 2.09
HLA-B-252ENST00000474381 MYT1Q01538 1121 aa28.08■■■□□ 2.09
HLA-B-252ENST00000474381 BARGINQ6ZT62 677 aa28.08■■■□□ 2.09
HLA-B-252ENST00000474381 COL18A1P39060 1754 aa28.07■■■□□ 2.08
HLA-B-252ENST00000474381 KRT27Q7Z3Y8 459 aa28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms