RNA–Protein interactions for RNA: ENST00000474354.1

NRXN1-216, Transcript of neurexin 1, humanhuman

TSL 4

Gene NRXN1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN1-216ENST00000474354 GPBP1L1Q9HC44 474 aaPredicted RBP10.12□□□□□ -0.79
NRXN1-216ENST00000474354 CRIPAKQ8N1N5 446 aa10.1□□□□□ -0.79
NRXN1-216ENST00000474354 POLR3EQ9NVU0 708 aa10.1□□□□□ -0.79
NRXN1-216ENST00000474354 SMPD1P17405 629 aa10.09□□□□□ -0.79
NRXN1-216ENST00000474354 CTHP32929 405 aa10.09□□□□□ -0.79
NRXN1-216ENST00000474354 SH3BP2P78314 561 aa10.09□□□□□ -0.79
NRXN1-216ENST00000474354 CTC1Q2NKJ3 1217 aa10.09□□□□□ -0.79
NRXN1-216ENST00000474354 AAASQ9NRG9 546 aa10.09□□□□□ -0.79
NRXN1-216ENST00000474354 EHBP1Q8NDI1 1231 aa10.08□□□□□ -0.8
NRXN1-216ENST00000474354 TSC1Q92574 1164 aa10.08□□□□□ -0.8
NRXN1-216ENST00000474354 FAM117AQ9C073 453 aa10.08□□□□□ -0.8
NRXN1-216ENST00000474354 ST8SIA5O15466 376 aa10.07□□□□□ -0.8
NRXN1-216ENST00000474354 F12P00748 615 aaPredicted RBP10.07□□□□□ -0.8
NRXN1-216ENST00000474354 SKIV2LQ15477 1246 aaKnown RBP10.07□□□□□ -0.8
NRXN1-216ENST00000474354 SH3D19Q5HYK7 790 aa10.07□□□□□ -0.8
NRXN1-216ENST00000474354 HELBQ8NG08 1087 aaPredicted RBP10.07□□□□□ -0.8
NRXN1-216ENST00000474354 BAP1Q92560 729 aa10.07□□□□□ -0.8
NRXN1-216ENST00000474354 CUX2O14529 1486 aa10.06□□□□□ -0.8
NRXN1-216ENST00000474354 J3QL48 77 aa10.06□□□□□ -0.8
NRXN1-216ENST00000474354 SMCPP49901 116 aaPredicted RBP10.06□□□□□ -0.8
NRXN1-216ENST00000474354 LINC01559Q495D7 138 aa10.06□□□□□ -0.8
NRXN1-216ENST00000474354 RTL5Q5HYW3 569 aaPredicted RBP10.06□□□□□ -0.8
NRXN1-216ENST00000474354 ZNF511Q8NB15 262 aa10.06□□□□□ -0.8
NRXN1-216ENST00000474354 ZNF775Q96BV0 537 aaPredicted RBP10.06□□□□□ -0.8
NRXN1-216ENST00000474354 AXIN1O15169 862 aa10.05□□□□□ -0.8
NRXN1-216ENST00000474354 PER1O15534 1290 aaPredicted RBP10.05□□□□□ -0.8
NRXN1-216ENST00000474354 SIAH2O43255 324 aa10.05□□□□□ -0.8
NRXN1-216ENST00000474354 MAP10Q9P2G4 905 aa10.04□□□□□ -0.8
NRXN1-216ENST00000474354 PLEKHG3A1L390 1219 aa10.03□□□□□ -0.8
NRXN1-216ENST00000474354 ALDH1A1P00352 501 aa10.03□□□□□ -0.8
NRXN1-216ENST00000474354 SCRIBQ14160 1630 aa10.03□□□□□ -0.8
NRXN1-216ENST00000474354 VARSP26640 1264 aaKnown RBP10.02□□□□□ -0.81
NRXN1-216ENST00000474354 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.01□□□□□ -0.81
NRXN1-216ENST00000474354 DCAF1Q9Y4B6 1507 aa10.01□□□□□ -0.81
NRXN1-216ENST00000474354 ARMC2Q8NEN0 867 aa10□□□□□ -0.81
NRXN1-216ENST00000474354 HPS1Q92902 700 aa10□□□□□ -0.81
NRXN1-216ENST00000474354 ATP1B4Q9UN42 357 aaPredicted RBP10□□□□□ -0.81
NRXN1-216ENST00000474354 NEUROD2Q15784 382 aa9.99□□□□□ -0.81
NRXN1-216ENST00000474354 PPP2R2DQ66LE6 453 aa9.99□□□□□ -0.81
NRXN1-216ENST00000474354 MPNDQ8N594 471 aa9.99□□□□□ -0.81
NRXN1-216ENST00000474354 PROCA1Q8NCQ7 364 aaPredicted RBP9.99□□□□□ -0.81
NRXN1-216ENST00000474354 WASF2Q9Y6W5 498 aa9.99□□□□□ -0.81
NRXN1-216ENST00000474354 POTECB2RU33 542 aa9.97□□□□□ -0.81
NRXN1-216ENST00000474354 CTDSPL2Q05D32 466 aa9.97□□□□□ -0.81
NRXN1-216ENST00000474354 FAM174AQ8TBP5 190 aa9.97□□□□□ -0.81
NRXN1-216ENST00000474354 DACH1Q9UI36 760 aa9.97□□□□□ -0.81
NRXN1-216ENST00000474354 ZCCHC6Q5VYS8 1495 aaKnown RBP9.97□□□□□ -0.81
NRXN1-216ENST00000474354 NBPF14Q5TI25 921 aa9.96□□□□□ -0.82
NRXN1-216ENST00000474354 FOXJ1Q92949 421 aa9.96□□□□□ -0.82
NRXN1-216ENST00000474354 TLL2Q9Y6L7 1015 aa9.96□□□□□ -0.82
NRXN1-216ENST00000474354 BPHLQ86WA6 291 aaPredicted RBP9.95□□□□□ -0.82
NRXN1-216ENST00000474354 GOPCQ9HD26 462 aa9.95□□□□□ -0.82
NRXN1-216ENST00000474354 AGERQ15109 404 aa9.94□□□□□ -0.82
NRXN1-216ENST00000474354 FBXO31Q5XUX0 539 aaPredicted RBP9.94□□□□□ -0.82
NRXN1-216ENST00000474354 GMPR2Q9P2T1 348 aaKnown RBP9.94□□□□□ -0.82
NRXN1-216ENST00000474354 TPRNQ4KMQ1 711 aa9.93□□□□□ -0.82
NRXN1-216ENST00000474354 GPKOWQ92917 476 aaPredicted RBP eCLIP9.93□□□□□ -0.82
NRXN1-216ENST00000474354 ATP13A2Q9NQ11 1180 aa9.93□□□□□ -0.82
NRXN1-216ENST00000474354 CDK15Q96Q40 435 aa9.92□□□□□ -0.82
NRXN1-216ENST00000474354 BRPF1P55201 1214 aaPredicted RBP9.91□□□□□ -0.82
NRXN1-216ENST00000474354 C4orf48Q5BLP8 95 aa9.91□□□□□ -0.82
NRXN1-216ENST00000474354 LRRN4Q8WUT4 740 aa9.91□□□□□ -0.82
NRXN1-216ENST00000474354 PCMTD1Q96MG8 357 aaPredicted RBP9.91□□□□□ -0.82
NRXN1-216ENST00000474354 ERCC6Q03468 1493 aa9.91□□□□□ -0.82
NRXN1-216ENST00000474354 C11orf95C9JLR9 678 aaPredicted RBP9.9□□□□□ -0.82
NRXN1-216ENST00000474354 AP1G2O75843 785 aa9.9□□□□□ -0.82
NRXN1-216ENST00000474354 ADH1CP00326 375 aa9.9□□□□□ -0.82
NRXN1-216ENST00000474354 NNTQ13423 1086 aa9.9□□□□□ -0.82
NRXN1-216ENST00000474354 SH3RF1Q7Z6J0 888 aa9.9□□□□□ -0.82
NRXN1-216ENST00000474354 SENP2Q9HC62 589 aa9.9□□□□□ -0.82
NRXN1-216ENST00000474354 CAPN5O15484 640 aaPredicted RBP9.89□□□□□ -0.83
NRXN1-216ENST00000474354 SH3BP5LQ7L8J4 393 aa9.89□□□□□ -0.83
NRXN1-216ENST00000474354 IL27Q8NEV9 243 aa9.89□□□□□ -0.83
NRXN1-216ENST00000474354 C1QTNF2Q9BXJ5 285 aa9.89□□□□□ -0.83
NRXN1-216ENST00000474354 RFC5P40937 340 aa9.88□□□□□ -0.83
NRXN1-216ENST00000474354 ARID5BQ14865 1188 aa9.88□□□□□ -0.83
NRXN1-216ENST00000474354 ZC3H4Q9UPT8 1303 aaKnown RBP9.87□□□□□ -0.83
NRXN1-216ENST00000474354 NCAPD3P42695 1498 aa9.87□□□□□ -0.83
NRXN1-216ENST00000474354 KIFC2Q96AC6 838 aa9.87□□□□□ -0.83
NRXN1-216ENST00000474354 FKBPLQ9UIM3 349 aa9.87□□□□□ -0.83
NRXN1-216ENST00000474354 USP17L8P0C7I0 530 aa9.86□□□□□ -0.83
NRXN1-216ENST00000474354 NR5A1Q13285 461 aa9.86□□□□□ -0.83
NRXN1-216ENST00000474354 NR6A1Q15406 480 aa9.86□□□□□ -0.83
NRXN1-216ENST00000474354 PDXDC2PQ6P474 469 aa9.86□□□□□ -0.83
NRXN1-216ENST00000474354 TRMT44Q8IYL2 757 aaKnown RBP9.86□□□□□ -0.83
NRXN1-216ENST00000474354 TRIM47Q96LD4 638 aa9.86□□□□□ -0.83
NRXN1-216ENST00000474354 MAGEB6P1A0A0J9YX57 407 aa9.85□□□□□ -0.83
NRXN1-216ENST00000474354 MAP4K5Q9Y4K4 846 aa9.85□□□□□ -0.83
NRXN1-216ENST00000474354 PNMA1Q8ND90 353 aa9.84□□□□□ -0.83
NRXN1-216ENST00000474354 TIMP2P16035 220 aa9.83□□□□□ -0.84
NRXN1-216ENST00000474354 GRM5P41594 1212 aa9.83□□□□□ -0.84
NRXN1-216ENST00000474354 WDR4P57081 412 aaKnown RBP9.83□□□□□ -0.84
NRXN1-216ENST00000474354 TMEM259Q4ZIN3 620 aa9.83□□□□□ -0.84
NRXN1-216ENST00000474354 ARHGAP9Q9BRR9 750 aa9.83□□□□□ -0.84
NRXN1-216ENST00000474354 CARD14Q9BXL6 1004 aa9.83□□□□□ -0.84
NRXN1-216ENST00000474354 SNRPBP14678 240 aaKnown RBP9.82□□□□□ -0.84
NRXN1-216ENST00000474354 ERFEQ4G0M1 354 aa9.82□□□□□ -0.84
NRXN1-216ENST00000474354 VASH1Q7L8A9 365 aaPredicted RBP9.82□□□□□ -0.84
NRXN1-216ENST00000474354 TRIM46Q7Z4K8 759 aa9.82□□□□□ -0.84
NRXN1-216ENST00000474354 KLF16Q9BXK1 252 aaPredicted RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms