RNA–Protein interactions for RNA: ENST00000474336.5

PKNOX1-205, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-205ENST00000474336 ST8SIA5O15466 376 aa11.57□□□□□ -0.56
PKNOX1-205ENST00000474336 LMOD2Q6P5Q4 547 aa11.57□□□□□ -0.56
PKNOX1-205ENST00000474336 TREML4Q6UXN2 200 aa11.57□□□□□ -0.56
PKNOX1-205ENST00000474336 TROQ12816 1431 aaPredicted RBP11.57□□□□□ -0.56
PKNOX1-205ENST00000474336 RSPH4AQ5TD94 716 aa11.56□□□□□ -0.56
PKNOX1-205ENST00000474336 KCNV2Q8TDN2 545 aa11.56□□□□□ -0.56
PKNOX1-205ENST00000474336 PCGF6Q9BYE7 350 aa11.56□□□□□ -0.56
PKNOX1-205ENST00000474336 FCHSD2O94868 740 aa11.55□□□□□ -0.56
PKNOX1-205ENST00000474336 SPSB2Q99619 263 aa11.55□□□□□ -0.56
PKNOX1-205ENST00000474336 PKD2L1Q9P0L9 805 aa11.55□□□□□ -0.56
PKNOX1-205ENST00000474336 PLEKHD1A6NEE1 506 aa11.54□□□□□ -0.56
PKNOX1-205ENST00000474336 OATP04181 439 aa11.54□□□□□ -0.56
PKNOX1-205ENST00000474336 FOXC1Q12948 553 aa11.54□□□□□ -0.56
PKNOX1-205ENST00000474336 PXYLP1Q8TE99 480 aa11.54□□□□□ -0.56
PKNOX1-205ENST00000474336 TTC37Q6PGP7 1564 aa11.54□□□□□ -0.56
PKNOX1-205ENST00000474336 PHLDB1Q86UU1 1377 aa11.54□□□□□ -0.56
PKNOX1-205ENST00000474336 PTPN23Q9H3S7 1636 aa11.53□□□□□ -0.56
PKNOX1-205ENST00000474336 PUS10Q3MIT2 529 aaKnown RBP11.53□□□□□ -0.56
PKNOX1-205ENST00000474336 CYB5RLQ6IPT4 315 aa11.53□□□□□ -0.56
PKNOX1-205ENST00000474336 PREX2Q70Z35 1606 aa11.53□□□□□ -0.56
PKNOX1-205ENST00000474336 LCE2AQ5TA79 106 aaPredicted RBP11.52□□□□□ -0.57
PKNOX1-205ENST00000474336 CRIPAKQ8N1N5 446 aa11.52□□□□□ -0.57
PKNOX1-205ENST00000474336 CDC42BPBQ9Y5S2 1711 aa11.52□□□□□ -0.57
PKNOX1-205ENST00000474336 MYOM3Q5VTT5 1437 aa11.52□□□□□ -0.57
PKNOX1-205ENST00000474336 RPIAP49247 311 aa11.51□□□□□ -0.57
PKNOX1-205ENST00000474336 AMER1Q5JTC6 1135 aaPredicted RBP11.51□□□□□ -0.57
PKNOX1-205ENST00000474336 WDR7Q9Y4E6 1490 aa11.51□□□□□ -0.57
PKNOX1-205ENST00000474336 CCNB3Q8WWL7 1395 aa11.5□□□□□ -0.57
PKNOX1-205ENST00000474336 RRBP1Q9P2E9 1410 aaKnown RBP11.5□□□□□ -0.57
PKNOX1-205ENST00000474336 FGD6Q6ZV73 1430 aa11.49□□□□□ -0.57
PKNOX1-205ENST00000474336 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.49□□□□□ -0.57
PKNOX1-205ENST00000474336 CD2BP2O95400 341 aaKnown RBP11.48□□□□□ -0.57
PKNOX1-205ENST00000474336 AVPP01185 164 aa11.48□□□□□ -0.57
PKNOX1-205ENST00000474336 FAM50AQ14320 339 aaKnown RBP11.48□□□□□ -0.57
PKNOX1-205ENST00000474336 ASXL2Q76L83 1435 aa11.48□□□□□ -0.57
PKNOX1-205ENST00000474336 ABCA9Q8IUA7 1624 aa11.47□□□□□ -0.57
PKNOX1-205ENST00000474336 TOR4AQ9NXH8 423 aa11.47□□□□□ -0.57
PKNOX1-205ENST00000474336 MAPKBP1O60336 1514 aa11.46□□□□□ -0.57
PKNOX1-205ENST00000474336 ARHGAP5Q13017 1502 aa11.46□□□□□ -0.57
PKNOX1-205ENST00000474336 ABCC10Q5T3U5 1492 aa11.46□□□□□ -0.57
PKNOX1-205ENST00000474336 METTL3Q86U44 580 aaKnown RBP11.46□□□□□ -0.57
PKNOX1-205ENST00000474336 TSHZ2Q9NRE2 1034 aa11.46□□□□□ -0.57
PKNOX1-205ENST00000474336 CROCC2H7BZ55 1655 aa11.46□□□□□ -0.58
PKNOX1-205ENST00000474336 TSPOAP1O95153 1857 aa11.45□□□□□ -0.58
PKNOX1-205ENST00000474336 ITGAEP38570 1179 aa11.45□□□□□ -0.58
PKNOX1-205ENST00000474336 CYP4X1Q8N118 509 aa11.45□□□□□ -0.58
PKNOX1-205ENST00000474336 DACH1Q9UI36 760 aa11.45□□□□□ -0.58
PKNOX1-205ENST00000474336 FCF1Q9Y324 198 aaKnown RBP11.45□□□□□ -0.58
PKNOX1-205ENST00000474336 ADGBQ8N7X0 1667 aa11.44□□□□□ -0.58
PKNOX1-205ENST00000474336 AXIN1O15169 862 aa11.44□□□□□ -0.58
PKNOX1-205ENST00000474336 MORN1Q5T089 497 aa11.44□□□□□ -0.58
PKNOX1-205ENST00000474336 GPATCH8Q9UKJ3 1502 aaKnown RBP11.44□□□□□ -0.58
PKNOX1-205ENST00000474336 CAMSAP2Q08AD1 1489 aa11.44□□□□□ -0.58
PKNOX1-205ENST00000474336 HIC1Q14526 733 aa11.43□□□□□ -0.58
PKNOX1-205ENST00000474336 CTC1Q2NKJ3 1217 aa11.43□□□□□ -0.58
PKNOX1-205ENST00000474336 THAP11Q96EK4 314 aa11.43□□□□□ -0.58
PKNOX1-205ENST00000474336 MIA2Q96PC5 1412 aa11.43□□□□□ -0.58
PKNOX1-205ENST00000474336 DNMT1P26358 1616 aaKnown RBP11.42□□□□□ -0.58
PKNOX1-205ENST00000474336 KIF13AQ9H1H9 1805 aa11.42□□□□□ -0.58
PKNOX1-205ENST00000474336 SAMD9LQ8IVG5 1584 aa11.42□□□□□ -0.58
PKNOX1-205ENST00000474336 GMPR2Q9P2T1 348 aaKnown RBP11.42□□□□□ -0.58
PKNOX1-205ENST00000474336 TCOF1Q13428 1488 aaKnown RBP11.42□□□□□ -0.58
PKNOX1-205ENST00000474336 CFAP74Q9C0B2 1584 aa11.41□□□□□ -0.58
PKNOX1-205ENST00000474336 DIP2BQ9P265 1576 aa11.41□□□□□ -0.58
PKNOX1-205ENST00000474336 C11orf95C9JLR9 678 aaPredicted RBP11.41□□□□□ -0.58
PKNOX1-205ENST00000474336 FMNL1O95466 1100 aaPredicted RBP11.41□□□□□ -0.58
PKNOX1-205ENST00000474336 RDH13Q8NBN7 331 aa11.41□□□□□ -0.58
PKNOX1-205ENST00000474336 CFDP1Q9UEE9 299 aaPredicted RBP11.41□□□□□ -0.58
PKNOX1-205ENST00000474336 DAXXQ9UER7 740 aaPredicted RBP11.41□□□□□ -0.58
PKNOX1-205ENST00000474336 ZNF777Q9ULD5 760 aaPredicted RBP11.41□□□□□ -0.58
PKNOX1-205ENST00000474336 MAP3K4Q9Y6R4 1608 aa11.4□□□□□ -0.58
PKNOX1-205ENST00000474336 SEMA3EO15041 775 aa11.4□□□□□ -0.58
PKNOX1-205ENST00000474336 WFS1O76024 890 aa11.4□□□□□ -0.58
PKNOX1-205ENST00000474336 ATP6V1AP38606 617 aa11.4□□□□□ -0.58
PKNOX1-205ENST00000474336 SMCPP49901 116 aaPredicted RBP11.4□□□□□ -0.58
PKNOX1-205ENST00000474336 FUT2Q10981 343 aa11.4□□□□□ -0.58
PKNOX1-205ENST00000474336 FAM160A2Q8N612 972 aaPredicted RBP11.4□□□□□ -0.58
PKNOX1-205ENST00000474336 GCC2Q8IWJ2 1684 aa11.39□□□□□ -0.59
PKNOX1-205ENST00000474336 SYCP2Q9BX26 1530 aa11.39□□□□□ -0.59
PKNOX1-205ENST00000474336 RTN4Q9NQC3 1192 aaKnown RBP11.38□□□□□ -0.59
PKNOX1-205ENST00000474336 SALL2Q9Y467 1007 aaPredicted RBP11.38□□□□□ -0.59
PKNOX1-205ENST00000474336 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.38□□□□□ -0.59
PKNOX1-205ENST00000474336 ARAP3Q8WWN8 1544 aa11.37□□□□□ -0.59
PKNOX1-205ENST00000474336 ZBTB24O43167 697 aaPredicted RBP11.37□□□□□ -0.59
PKNOX1-205ENST00000474336 SLC27A5Q9Y2P5 690 aa11.37□□□□□ -0.59
PKNOX1-205ENST00000474336 ABCC1P33527 1531 aa11.36□□□□□ -0.59
PKNOX1-205ENST00000474336 DDX11L8A8MPP1 907 aa11.36□□□□□ -0.59
PKNOX1-205ENST00000474336 GLI2P10070 1586 aa11.36□□□□□ -0.59
PKNOX1-205ENST00000474336 ZNF644Q9H582 1327 aaPredicted RBP11.35□□□□□ -0.59
PKNOX1-205ENST00000474336 PLCH2O75038 1416 aa11.35□□□□□ -0.59
PKNOX1-205ENST00000474336 DAPK1P53355 1430 aa11.35□□□□□ -0.59
PKNOX1-205ENST00000474336 TTC24A2A3L6 582 aaPredicted RBP11.35□□□□□ -0.59
PKNOX1-205ENST00000474336 GCGRP47871 477 aa11.35□□□□□ -0.59
PKNOX1-205ENST00000474336 FANCAO15360 1455 aa11.35□□□□□ -0.59
PKNOX1-205ENST00000474336 ARHGEF5Q12774 1597 aa11.35□□□□□ -0.59
PKNOX1-205ENST00000474336 PLEKHH2Q8IVE3 1493 aa11.34□□□□□ -0.59
PKNOX1-205ENST00000474336 BRICD5Q6PL45 260 aa11.34□□□□□ -0.59
PKNOX1-205ENST00000474336 CD109Q6YHK3 1445 aa11.34□□□□□ -0.59
PKNOX1-205ENST00000474336 GNPATO15228 680 aa11.33□□□□□ -0.6
PKNOX1-205ENST00000474336 FECHP22830 423 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms