RNA–Protein interactions for RNA: ENST00000474283.1

LDLRAP1-204, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 3

Gene LDLRAP1, Length 913 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-204ENST00000474283 ANKRD26Q9UPS8 1709 aa18.68■□□□□ 0.58
LDLRAP1-204ENST00000474283 USP6P35125 1406 aa18.67■□□□□ 0.58
LDLRAP1-204ENST00000474283 NSD3Q9BZ95 1437 aa18.67■□□□□ 0.58
LDLRAP1-204ENST00000474283 NPHP3Q7Z494 1330 aa18.67■□□□□ 0.58
LDLRAP1-204ENST00000474283 AHDC1Q5TGY3 1603 aaPredicted RBP18.67■□□□□ 0.58
LDLRAP1-204ENST00000474283 CENPBP07199 599 aaPredicted RBP18.66■□□□□ 0.58
LDLRAP1-204ENST00000474283 EDC4Q6P2E9 1401 aaKnown RBP18.66■□□□□ 0.58
LDLRAP1-204ENST00000474283 PAK3O75914 559 aaPredicted RBP18.65■□□□□ 0.58
LDLRAP1-204ENST00000474283 KRT28Q7Z3Y7 464 aa18.65■□□□□ 0.58
LDLRAP1-204ENST00000474283 CARD14Q9BXL6 1004 aa18.65■□□□□ 0.58
LDLRAP1-204ENST00000474283 PIK3C2AO00443 1686 aa18.65■□□□□ 0.58
LDLRAP1-204ENST00000474283 ALS2Q96Q42 1657 aa18.65■□□□□ 0.58
LDLRAP1-204ENST00000474283 PXDNQ92626 1479 aa18.65■□□□□ 0.58
LDLRAP1-204ENST00000474283 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.64■□□□□ 0.57
LDLRAP1-204ENST00000474283 KNSTRNQ9Y448 316 aa18.64■□□□□ 0.57
LDLRAP1-204ENST00000474283 CNGB1Q14028 1251 aaPredicted RBP18.63■□□□□ 0.57
LDLRAP1-204ENST00000474283 MARF1Q9Y4F3 1742 aaKnown RBP18.62■□□□□ 0.57
LDLRAP1-204ENST00000474283 COL16A1Q07092 1604 aaPredicted RBP18.61■□□□□ 0.57
LDLRAP1-204ENST00000474283 TTC21BQ7Z4L5 1316 aa18.61■□□□□ 0.57
LDLRAP1-204ENST00000474283 LMOD2Q6P5Q4 547 aa18.61■□□□□ 0.57
LDLRAP1-204ENST00000474283 SSH2Q76I76 1423 aa18.59■□□□□ 0.57
LDLRAP1-204ENST00000474283 BRD4O60885 1362 aaPredicted RBP18.59■□□□□ 0.57
LDLRAP1-204ENST00000474283 CGNL1Q0VF96 1302 aa18.59■□□□□ 0.57
LDLRAP1-204ENST00000474283 PER1O15534 1290 aaPredicted RBP18.59■□□□□ 0.57
LDLRAP1-204ENST00000474283 MAP2P11137 1827 aaKnown RBP18.58■□□□□ 0.57
LDLRAP1-204ENST00000474283 SOS2Q07890 1332 aaPredicted RBP18.58■□□□□ 0.57
LDLRAP1-204ENST00000474283 TTC21AQ8NDW8 1320 aa18.58■□□□□ 0.57
LDLRAP1-204ENST00000474283 USP54Q70EL1 1684 aa18.58■□□□□ 0.57
LDLRAP1-204ENST00000474283 RALBP1Q15311 655 aa18.58■□□□□ 0.56
LDLRAP1-204ENST00000474283 TNS3Q68CZ2 1445 aa18.57■□□□□ 0.56
LDLRAP1-204ENST00000474283 SBNO1A3KN83 1393 aa18.57■□□□□ 0.56
LDLRAP1-204ENST00000474283 NME9Q86XW9 330 aa18.57■□□□□ 0.56
LDLRAP1-204ENST00000474283 ABTB2Q8N961 1025 aa18.57■□□□□ 0.56
LDLRAP1-204ENST00000474283 PLEKHG5O94827 1062 aa18.56■□□□□ 0.56
LDLRAP1-204ENST00000474283 CC2D1BQ5T0F9 858 aaKnown RBP18.56■□□□□ 0.56
LDLRAP1-204ENST00000474283 NUTM2GQ5VZR2 741 aa18.56■□□□□ 0.56
LDLRAP1-204ENST00000474283 ABCA3Q99758 1704 aa18.56■□□□□ 0.56
LDLRAP1-204ENST00000474283 CRYBG1Q9Y4K1 1723 aa18.55■□□□□ 0.56
LDLRAP1-204ENST00000474283 GGNBP2Q9H3C7 697 aa18.55■□□□□ 0.56
LDLRAP1-204ENST00000474283 PRKRIP1Q9H875 184 aaPredicted RBP18.55■□□□□ 0.56
LDLRAP1-204ENST00000474283 ZRANB1Q9UGI0 708 aa18.55■□□□□ 0.56
LDLRAP1-204ENST00000474283 PHRF1Q9P1Y6 1649 aaKnown RBP18.55■□□□□ 0.56
LDLRAP1-204ENST00000474283 SPATA31A3Q5VYP0 1347 aa18.54■□□□□ 0.56
LDLRAP1-204ENST00000474283 FYB1O15117 783 aa18.54■□□□□ 0.56
LDLRAP1-204ENST00000474283 AMER1Q5JTC6 1135 aaPredicted RBP18.54■□□□□ 0.56
LDLRAP1-204ENST00000474283 LTN1O94822 1766 aa18.54■□□□□ 0.56
LDLRAP1-204ENST00000474283 SHPRHQ149N8 1683 aa18.54■□□□□ 0.56
LDLRAP1-204ENST00000474283 NLRP6P59044 892 aa18.53■□□□□ 0.56
LDLRAP1-204ENST00000474283 NSD2O96028 1365 aa18.53■□□□□ 0.56
LDLRAP1-204ENST00000474283 LRRC59Q96AG4 307 aaKnown RBP18.52■□□□□ 0.56
LDLRAP1-204ENST00000474283 COG3Q96JB2 828 aa18.52■□□□□ 0.56
LDLRAP1-204ENST00000474283 ARHGEF10O15013 1369 aa18.52■□□□□ 0.55
LDLRAP1-204ENST00000474283 COL22A1Q8NFW1 1626 aaPredicted RBP18.52■□□□□ 0.55
LDLRAP1-204ENST00000474283 HSPA1LP34931 641 aa18.5■□□□□ 0.55
LDLRAP1-204ENST00000474283 MORC1Q86VD1 984 aa18.5■□□□□ 0.55
LDLRAP1-204ENST00000474283 NLRP13Q86W25 1043 aa18.5■□□□□ 0.55
LDLRAP1-204ENST00000474283 NPC1L1Q9UHC9 1359 aa18.5■□□□□ 0.55
LDLRAP1-204ENST00000474283 OVOS2A0A0J9YW53 1432 aa18.49■□□□□ 0.55
LDLRAP1-204ENST00000474283 OVOS2Q6IE36 1432 aa18.49■□□□□ 0.55
LDLRAP1-204ENST00000474283 MED1Q15648 1581 aaPredicted RBP18.49■□□□□ 0.55
LDLRAP1-204ENST00000474283 USP31Q70CQ4 1352 aa18.48■□□□□ 0.55
LDLRAP1-204ENST00000474283 SOX12O15370 315 aa18.48■□□□□ 0.55
LDLRAP1-204ENST00000474283 TNNT2P45379 298 aaPredicted RBP18.48■□□□□ 0.55
LDLRAP1-204ENST00000474283 MYBBP1AQ9BQG0 1328 aaKnown RBP18.48■□□□□ 0.55
LDLRAP1-204ENST00000474283 RGPD5Q99666 1765 aa18.47■□□□□ 0.55
LDLRAP1-204ENST00000474283 PNPLA6Q8IY17 1366 aa18.46■□□□□ 0.55
LDLRAP1-204ENST00000474283 SLIT3O75094 1523 aa18.46■□□□□ 0.55
LDLRAP1-204ENST00000474283 CABLES1Q8TDN4 633 aa18.46■□□□□ 0.55
LDLRAP1-204ENST00000474283 HAP1P54257 671 aaPredicted RBP18.45■□□□□ 0.54
LDLRAP1-204ENST00000474283 MRS2Q9HD23 443 aa18.44■□□□□ 0.54
LDLRAP1-204ENST00000474283 JCADQ9P266 1359 aa18.43■□□□□ 0.54
LDLRAP1-204ENST00000474283 USP19O94966 1318 aa18.43■□□□□ 0.54
LDLRAP1-204ENST00000474283 NFAT5O94916 1531 aa18.43■□□□□ 0.54
LDLRAP1-204ENST00000474283 PARD3Q8TEW0 1356 aa18.42■□□□□ 0.54
LDLRAP1-204ENST00000474283 YTHDC1Q96MU7 727 aaKnown RBP18.42■□□□□ 0.54
LDLRAP1-204ENST00000474283 ZBTB7CA1YPR0 619 aa18.41■□□□□ 0.54
LDLRAP1-204ENST00000474283 GCP02774 474 aa18.41■□□□□ 0.54
LDLRAP1-204ENST00000474283 FBLN1P23142 703 aa18.41■□□□□ 0.54
LDLRAP1-204ENST00000474283 KCNH5Q8NCM2 988 aa18.41■□□□□ 0.54
LDLRAP1-204ENST00000474283 NUTM2BA6NNL0 878 aaPredicted RBP18.4■□□□□ 0.54
LDLRAP1-204ENST00000474283 NUTM2EB1AL46 878 aaPredicted RBP18.4■□□□□ 0.54
LDLRAP1-204ENST00000474283 NUTM2AQ8IVF1 878 aaPredicted RBP18.4■□□□□ 0.54
LDLRAP1-204ENST00000474283 PEAK1Q9H792 1746 aa18.4■□□□□ 0.54
LDLRAP1-204ENST00000474283 ZC3H6P61129 1189 aaKnown RBP18.38■□□□□ 0.53
LDLRAP1-204ENST00000474283 RRS1Q15050 365 aaKnown RBP18.38■□□□□ 0.53
LDLRAP1-204ENST00000474283 PPM1GO15355 546 aaPredicted RBP18.37■□□□□ 0.53
LDLRAP1-204ENST00000474283 PLCH1Q4KWH8 1693 aa18.37■□□□□ 0.53
LDLRAP1-204ENST00000474283 COL18A1P39060 1754 aa18.37■□□□□ 0.53
LDLRAP1-204ENST00000474283 PPP2R1AP30153 589 aa18.36■□□□□ 0.53
LDLRAP1-204ENST00000474283 COL14A1Q05707 1796 aaKnown RBP18.36■□□□□ 0.53
LDLRAP1-204ENST00000474283 AATKQ6ZMQ8 1374 aa18.36■□□□□ 0.53
LDLRAP1-204ENST00000474283 RGPD2P0DJD1 1756 aa18.35■□□□□ 0.53
LDLRAP1-204ENST00000474283 KIAA0232Q92628 1395 aa18.34■□□□□ 0.53
LDLRAP1-204ENST00000474283 MAP3K19Q56UN5 1328 aa18.34■□□□□ 0.53
LDLRAP1-204ENST00000474283 SPATA31A6Q5VVP1 1343 aa18.34■□□□□ 0.53
LDLRAP1-204ENST00000474283 ADAMTS2O95450 1211 aa18.34■□□□□ 0.53
LDLRAP1-204ENST00000474283 AMPHP49418 695 aa18.34■□□□□ 0.53
LDLRAP1-204ENST00000474283 EMILIN1Q9Y6C2 1016 aa18.34■□□□□ 0.53
LDLRAP1-204ENST00000474283 MTHFSP49914 203 aa18.33■□□□□ 0.52
LDLRAP1-204ENST00000474283 POLKQ9UBT6 870 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms