RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 PXYLP1Q8TE99 480 aa7.89□□□□□ -1.15
BRCA1-212ENST00000473961 UBTFP17480 764 aaKnown RBP7.88□□□□□ -1.15
BRCA1-212ENST00000473961 MMP16P51512 607 aa7.88□□□□□ -1.15
BRCA1-212ENST00000473961 ZFP42Q96MM3 310 aa7.88□□□□□ -1.15
BRCA1-212ENST00000473961 BEGAINQ9BUH8 593 aa7.88□□□□□ -1.15
BRCA1-212ENST00000473961 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.87□□□□□ -1.15
BRCA1-212ENST00000473961 RNF225M0QZC1 329 aaPredicted RBP7.87□□□□□ -1.15
BRCA1-212ENST00000473961 GPAT2Q6NUI2 795 aa7.87□□□□□ -1.15
BRCA1-212ENST00000473961 WNT7BP56706 349 aa7.86□□□□□ -1.15
BRCA1-212ENST00000473961 FAM217BQ9NTX9 383 aaPredicted RBP7.86□□□□□ -1.15
BRCA1-212ENST00000473961 A6NJR5 290 aa7.85□□□□□ -1.15
BRCA1-212ENST00000473961 KRTAP9-2Q9BYQ4 174 aa7.85□□□□□ -1.15
BRCA1-212ENST00000473961 RAD21O60216 631 aa7.84□□□□□ -1.15
BRCA1-212ENST00000473961 IGHA1P01876 353 aa7.84□□□□□ -1.15
BRCA1-212ENST00000473961 RDH13Q8NBN7 331 aa7.84□□□□□ -1.15
BRCA1-212ENST00000473961 ADAMTS8Q9UP79 889 aa7.84□□□□□ -1.15
BRCA1-212ENST00000473961 DNMT3AQ9Y6K1 912 aaPredicted RBP7.84□□□□□ -1.15
BRCA1-212ENST00000473961 SOBPA7XYQ1 873 aa7.83□□□□□ -1.16
BRCA1-212ENST00000473961 SIAH2O43255 324 aa7.83□□□□□ -1.16
BRCA1-212ENST00000473961 PHOX2BQ99453 314 aa7.83□□□□□ -1.16
BRCA1-212ENST00000473961 KRTAP9-6A0A140TA67 174 aa7.82□□□□□ -1.16
BRCA1-212ENST00000473961 APBB1O00213 710 aa7.82□□□□□ -1.16
BRCA1-212ENST00000473961 MCM6Q14566 821 aa7.82□□□□□ -1.16
BRCA1-212ENST00000473961 SULF1Q8IWU6 871 aa7.82□□□□□ -1.16
BRCA1-212ENST00000473961 DXOO77932 396 aaKnown RBP7.81□□□□□ -1.16
BRCA1-212ENST00000473961 CLK2P49760 499 aaKnown RBP7.81□□□□□ -1.16
BRCA1-212ENST00000473961 ARID3AQ99856 593 aa7.8□□□□□ -1.16
BRCA1-212ENST00000473961 WASF2Q9Y6W5 498 aa7.8□□□□□ -1.16
BRCA1-212ENST00000473961 GCGRP47871 477 aa7.79□□□□□ -1.16
BRCA1-212ENST00000473961 KRT76Q01546 638 aa7.79□□□□□ -1.16
BRCA1-212ENST00000473961 MYSM1Q5VVJ2 828 aa7.79□□□□□ -1.16
BRCA1-212ENST00000473961 POLR3EQ9NVU0 708 aa7.79□□□□□ -1.16
BRCA1-212ENST00000473961 SPDYE5A6NIY4 337 aa7.78□□□□□ -1.16
BRCA1-212ENST00000473961 TRAK2O60296 914 aa7.78□□□□□ -1.16
BRCA1-212ENST00000473961 MRPL14Q6P1L8 145 aaKnown RBP7.78□□□□□ -1.16
BRCA1-212ENST00000473961 BANK1Q8NDB2 785 aa7.78□□□□□ -1.16
BRCA1-212ENST00000473961 PRM3Q9NNZ6 103 aa7.78□□□□□ -1.16
BRCA1-212ENST00000473961 DDX11L8A8MPP1 907 aa7.77□□□□□ -1.17
BRCA1-212ENST00000473961 TMEM259Q4ZIN3 620 aa7.77□□□□□ -1.17
BRCA1-212ENST00000473961 PROSER2Q86WR7 435 aaPredicted RBP7.77□□□□□ -1.17
BRCA1-212ENST00000473961 WWC1Q8IX03 1113 aa7.77□□□□□ -1.17
BRCA1-212ENST00000473961 CCDC24Q8N4L8 307 aa7.77□□□□□ -1.17
BRCA1-212ENST00000473961 PSMG3-AS1Q96PY0 264 aa7.77□□□□□ -1.17
BRCA1-212ENST00000473961 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.77□□□□□ -1.17
BRCA1-212ENST00000473961 TBC1D2Q9BYX2 928 aa7.77□□□□□ -1.17
BRCA1-212ENST00000473961 ADAM23O75077 832 aa7.76□□□□□ -1.17
BRCA1-212ENST00000473961 NUTM1Q86Y26 1132 aa7.76□□□□□ -1.17
BRCA1-212ENST00000473961 CLUAP1Q96AJ1 413 aa7.76□□□□□ -1.17
BRCA1-212ENST00000473961 PURBQ96QR8 312 aaKnown RBP7.76□□□□□ -1.17
BRCA1-212ENST00000473961 PPFIA3O75145 1194 aa7.75□□□□□ -1.17
BRCA1-212ENST00000473961 IRS1P35568 1242 aa7.75□□□□□ -1.17
BRCA1-212ENST00000473961 FOXK2Q01167 660 aa7.75□□□□□ -1.17
BRCA1-212ENST00000473961 PROCA1Q8NCQ7 364 aaPredicted RBP7.75□□□□□ -1.17
BRCA1-212ENST00000473961 ARID3CA6NKF2 412 aa7.74□□□□□ -1.17
BRCA1-212ENST00000473961 TUSC1Q2TAM9 212 aa7.74□□□□□ -1.17
BRCA1-212ENST00000473961 EHBP1Q8NDI1 1231 aa7.74□□□□□ -1.17
BRCA1-212ENST00000473961 NLRP7Q8WX94 980 aa7.74□□□□□ -1.17
BRCA1-212ENST00000473961 RFC5P40937 340 aa7.73□□□□□ -1.17
BRCA1-212ENST00000473961 Q3C1V9 767 aa7.73□□□□□ -1.17
BRCA1-212ENST00000473961 ZNF385CQ66K41 422 aaPredicted RBP7.73□□□□□ -1.17
BRCA1-212ENST00000473961 RIC3Q7Z5B4 369 aa7.73□□□□□ -1.17
BRCA1-212ENST00000473961 KRTAP1-3Q8IUG1 177 aa7.73□□□□□ -1.17
BRCA1-212ENST00000473961 USB1Q9BQ65 265 aaKnown RBP7.73□□□□□ -1.17
BRCA1-212ENST00000473961 GJA5P36382 358 aa7.72□□□□□ -1.17
BRCA1-212ENST00000473961 SCARF1Q14162 830 aa7.72□□□□□ -1.17
BRCA1-212ENST00000473961 CCDC97Q96F63 343 aaPredicted RBP7.72□□□□□ -1.17
BRCA1-212ENST00000473961 CNTNAP3BQ96NU0 1288 aa7.72□□□□□ -1.17
BRCA1-212ENST00000473961 CNTNAP3Q9BZ76 1288 aa7.72□□□□□ -1.17
BRCA1-212ENST00000473961 C1orf115Q9H7X2 142 aa7.72□□□□□ -1.17
BRCA1-212ENST00000473961 CD46P15529 392 aa7.71□□□□□ -1.18
BRCA1-212ENST00000473961 PPP2R2DQ66LE6 453 aa7.71□□□□□ -1.18
BRCA1-212ENST00000473961 CCDC82Q8N4S0 544 aa7.71□□□□□ -1.18
BRCA1-212ENST00000473961 GPR161Q8N6U8 529 aaKnown RBP7.71□□□□□ -1.18
BRCA1-212ENST00000473961 SERPINA10Q9UK55 444 aa7.71□□□□□ -1.18
BRCA1-212ENST00000473961 SOCS7O14512 581 aa7.7□□□□□ -1.18
BRCA1-212ENST00000473961 SPIRE2Q8WWL2 714 aa7.7□□□□□ -1.18
BRCA1-212ENST00000473961 SPTLC1O15269 473 aa7.69□□□□□ -1.18
BRCA1-212ENST00000473961 TIMP2P16035 220 aa7.69□□□□□ -1.18
BRCA1-212ENST00000473961 GRIPAP1Q4V328 841 aa7.69□□□□□ -1.18
BRCA1-212ENST00000473961 KANK3Q6NY19 840 aa7.69□□□□□ -1.18
BRCA1-212ENST00000473961 TLL2Q9Y6L7 1015 aa7.69□□□□□ -1.18
BRCA1-212ENST00000473961 PDIA4P13667 645 aaKnown RBP7.68□□□□□ -1.18
BRCA1-212ENST00000473961 USP46P62068 366 aa7.68□□□□□ -1.18
BRCA1-212ENST00000473961 SVOPQ8N4V2 548 aa7.68□□□□□ -1.18
BRCA1-212ENST00000473961 ARHGEF15O94989 841 aa7.67□□□□□ -1.18
BRCA1-212ENST00000473961 NNTQ13423 1086 aa7.67□□□□□ -1.18
BRCA1-212ENST00000473961 PTCRAQ6ISU1 281 aaPredicted RBP7.67□□□□□ -1.18
BRCA1-212ENST00000473961 RSBN1LQ6PCB5 846 aaPredicted RBP7.67□□□□□ -1.18
BRCA1-212ENST00000473961 LIMD1Q9UGP4 676 aa7.67□□□□□ -1.18
BRCA1-212ENST00000473961 COG6Q9Y2V7 657 aa7.67□□□□□ -1.18
BRCA1-212ENST00000473961 NUTM2BA6NNL0 878 aaPredicted RBP7.66□□□□□ -1.18
BRCA1-212ENST00000473961 NUTM2EB1AL46 878 aaPredicted RBP7.66□□□□□ -1.18
BRCA1-212ENST00000473961 MAN1A2O60476 641 aa7.66□□□□□ -1.18
BRCA1-212ENST00000473961 SH3BP2P78314 561 aa7.66□□□□□ -1.18
BRCA1-212ENST00000473961 NUTM2DQ5VT03 806 aaPredicted RBP7.66□□□□□ -1.18
BRCA1-212ENST00000473961 PRPF38BQ5VTL8 546 aaKnown RBP7.66□□□□□ -1.18
BRCA1-212ENST00000473961 NUTM2AQ8IVF1 878 aaPredicted RBP7.66□□□□□ -1.18
BRCA1-212ENST00000473961 FNBP4Q8N3X1 1017 aaPredicted RBP7.66□□□□□ -1.18
BRCA1-212ENST00000473961 WHAMMQ8TF30 809 aa7.66□□□□□ -1.18
BRCA1-212ENST00000473961 PODXL2Q9NZ53 605 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms