RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 CABLES1Q8TDN4 633 aa16.36■□□□□ 0.21
CPNE1-222ENST00000473373 EVC2Q86UK5 1308 aa16.36■□□□□ 0.21
CPNE1-222ENST00000473373 SRCAPQ6ZRS2 3230 aa16.36■□□□□ 0.21
CPNE1-222ENST00000473373 PLCH1Q4KWH8 1693 aa16.35■□□□□ 0.21
CPNE1-222ENST00000473373 CABP2Q9NPB3 220 aa16.35■□□□□ 0.21
CPNE1-222ENST00000473373 CCDC61Q9Y6R9 512 aa16.35■□□□□ 0.21
CPNE1-222ENST00000473373 NBPF8Q3BBV2 869 aa16.34■□□□□ 0.21
CPNE1-222ENST00000473373 PPIP5K1Q6PFW1 1433 aa16.34■□□□□ 0.21
CPNE1-222ENST00000473373 CCDC9Q9Y3X0 531 aaKnown RBP16.33■□□□□ 0.2
CPNE1-222ENST00000473373 ACEP12821 1306 aa16.33■□□□□ 0.2
CPNE1-222ENST00000473373 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.33■□□□□ 0.2
CPNE1-222ENST00000473373 UNC5CLQ8IV45 518 aa16.32■□□□□ 0.2
CPNE1-222ENST00000473373 NWD2Q9ULI1 1742 aa16.31■□□□□ 0.2
CPNE1-222ENST00000473373 RALGAPBQ86X10 1494 aa16.31■□□□□ 0.2
CPNE1-222ENST00000473373 NUTM2GQ5VZR2 741 aa16.3■□□□□ 0.2
CPNE1-222ENST00000473373 DEFB132Q7Z7B7 95 aa16.29■□□□□ 0.2
CPNE1-222ENST00000473373 CCER1Q8TC90 406 aaPredicted RBP16.29■□□□□ 0.2
CPNE1-222ENST00000473373 PHRF1Q9P1Y6 1649 aaKnown RBP16.29■□□□□ 0.2
CPNE1-222ENST00000473373 ABTB2Q8N961 1025 aa16.28■□□□□ 0.2
CPNE1-222ENST00000473373 EP400Q96L91 3159 aa16.28■□□□□ 0.2
CPNE1-222ENST00000473373 COL14A1Q05707 1796 aaKnown RBP16.28■□□□□ 0.2
CPNE1-222ENST00000473373 CRYBG1Q9Y4K1 1723 aa16.28■□□□□ 0.2
CPNE1-222ENST00000473373 GLI3P10071 1580 aa16.27■□□□□ 0.2
CPNE1-222ENST00000473373 A0A0G2JS52 829 aa16.27■□□□□ 0.2
CPNE1-222ENST00000473373 MYT1Q01538 1121 aa16.27■□□□□ 0.2
CPNE1-222ENST00000473373 SEPT12Q8IYM1 358 aa16.27■□□□□ 0.2
CPNE1-222ENST00000473373 CABP1Q9NZU7 370 aa16.27■□□□□ 0.2
CPNE1-222ENST00000473373 SLIT2O94813 1529 aa16.27■□□□□ 0.2
CPNE1-222ENST00000473373 AKAP12Q02952 1782 aa16.27■□□□□ 0.2
CPNE1-222ENST00000473373 BLMP54132 1417 aaPredicted RBP16.27■□□□□ 0.19
CPNE1-222ENST00000473373 POLR3AO14802 1390 aaPredicted RBP16.26■□□□□ 0.19
CPNE1-222ENST00000473373 PLEKHG3A1L390 1219 aa16.26■□□□□ 0.19
CPNE1-222ENST00000473373 PRDM11Q9NQV5 511 aa16.26■□□□□ 0.19
CPNE1-222ENST00000473373 SF3B2Q13435 895 aaKnown RBP16.25■□□□□ 0.19
CPNE1-222ENST00000473373 ZBTB7CA1YPR0 619 aa16.24■□□□□ 0.19
CPNE1-222ENST00000473373 TMC1Q8TDI8 760 aa16.24■□□□□ 0.19
CPNE1-222ENST00000473373 VPS72Q15906 364 aa16.23■□□□□ 0.19
CPNE1-222ENST00000473373 NLRP13Q86W25 1043 aa16.23■□□□□ 0.19
CPNE1-222ENST00000473373 NRAPQ86VF7 1730 aa16.22■□□□□ 0.19
CPNE1-222ENST00000473373 CLSPNQ9HAW4 1339 aa16.22■□□□□ 0.19
CPNE1-222ENST00000473373 ZC3H6P61129 1189 aaKnown RBP16.22■□□□□ 0.19
CPNE1-222ENST00000473373 BTG4Q9NY30 223 aa16.22■□□□□ 0.19
CPNE1-222ENST00000473373 BRWD3Q6RI45 1802 aa16.22■□□□□ 0.19
CPNE1-222ENST00000473373 FAM83GA6ND36 823 aa16.21■□□□□ 0.19
CPNE1-222ENST00000473373 KRT27Q7Z3Y8 459 aa16.21■□□□□ 0.19
CPNE1-222ENST00000473373 USP6P35125 1406 aa16.2■□□□□ 0.18
CPNE1-222ENST00000473373 NLRP6P59044 892 aa16.2■□□□□ 0.18
CPNE1-222ENST00000473373 MON2Q7Z3U7 1717 aa16.19■□□□□ 0.18
CPNE1-222ENST00000473373 NRKQ7Z2Y5 1582 aa16.19■□□□□ 0.18
CPNE1-222ENST00000473373 BRD4O60885 1362 aaPredicted RBP16.19■□□□□ 0.18
CPNE1-222ENST00000473373 KTN1Q86UP2 1357 aaKnown RBP16.19■□□□□ 0.18
CPNE1-222ENST00000473373 KIAA0232Q92628 1395 aa16.19■□□□□ 0.18
CPNE1-222ENST00000473373 SBNO2Q9Y2G9 1366 aa16.19■□□□□ 0.18
CPNE1-222ENST00000473373 ONECUT3O60422 494 aaPredicted RBP16.19■□□□□ 0.18
CPNE1-222ENST00000473373 CHRNA2Q15822 529 aa16.19■□□□□ 0.18
CPNE1-222ENST00000473373 ZNF692Q9BU19 519 aaPredicted RBP16.19■□□□□ 0.18
CPNE1-222ENST00000473373 STRN4Q9NRL3 753 aa16.19■□□□□ 0.18
CPNE1-222ENST00000473373 PSDA5PKW4 1024 aaPredicted RBP16.18■□□□□ 0.18
CPNE1-222ENST00000473373 EVA1CP58658 441 aa16.18■□□□□ 0.18
CPNE1-222ENST00000473373 HDGFL2Q7Z4V5 671 aaPredicted RBP16.18■□□□□ 0.18
CPNE1-222ENST00000473373 PIK3C2AO00443 1686 aa16.18■□□□□ 0.18
CPNE1-222ENST00000473373 ST20-MTHFSA0A0A6YYL1 179 aa16.17■□□□□ 0.18
CPNE1-222ENST00000473373 SLC24A1O60721 1099 aa16.17■□□□□ 0.18
CPNE1-222ENST00000473373 USP47Q96K76 1375 aa16.16■□□□□ 0.18
CPNE1-222ENST00000473373 SOX12O15370 315 aa16.16■□□□□ 0.18
CPNE1-222ENST00000473373 FAM98CQ17RN3 349 aaKnown RBP16.16■□□□□ 0.18
CPNE1-222ENST00000473373 TIMELESSQ9UNS1 1208 aa16.16■□□□□ 0.18
CPNE1-222ENST00000473373 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.15■□□□□ 0.18
CPNE1-222ENST00000473373 BAG6P46379 1132 aa16.14■□□□□ 0.17
CPNE1-222ENST00000473373 FAM182BQ5T319 152 aa16.14■□□□□ 0.17
CPNE1-222ENST00000473373 TERF2IPQ9NYB0 399 aa16.14■□□□□ 0.17
CPNE1-222ENST00000473373 TTC21AQ8NDW8 1320 aa16.14■□□□□ 0.17
CPNE1-222ENST00000473373 RGPD5Q99666 1765 aa16.13■□□□□ 0.17
CPNE1-222ENST00000473373 GCP02774 474 aa16.13■□□□□ 0.17
CPNE1-222ENST00000473373 TMF1P82094 1093 aa16.13■□□□□ 0.17
CPNE1-222ENST00000473373 USP35Q9P2H5 1018 aa16.13■□□□□ 0.17
CPNE1-222ENST00000473373 TTC21BQ7Z4L5 1316 aa16.13■□□□□ 0.17
CPNE1-222ENST00000473373 USP19O94966 1318 aa16.12■□□□□ 0.17
CPNE1-222ENST00000473373 EN1Q05925 392 aaPredicted RBP16.11■□□□□ 0.17
CPNE1-222ENST00000473373 SLC12A5Q9H2X9 1139 aa16.11■□□□□ 0.17
CPNE1-222ENST00000473373 LTN1O94822 1766 aa16.1■□□□□ 0.17
CPNE1-222ENST00000473373 KCNH5Q8NCM2 988 aa16.1■□□□□ 0.17
CPNE1-222ENST00000473373 CDCA8Q53HL2 280 aa16.09■□□□□ 0.17
CPNE1-222ENST00000473373 POLR3GLQ9BT43 218 aa16.09■□□□□ 0.17
CPNE1-222ENST00000473373 CPSF1Q10570 1443 aaKnown RBP16.09■□□□□ 0.17
CPNE1-222ENST00000473373 SLIT3O75094 1523 aa16.09■□□□□ 0.17
CPNE1-222ENST00000473373 SPATA31A5Q5VU36 1347 aa16.08■□□□□ 0.16
CPNE1-222ENST00000473373 SPATA31A7Q8IWB4 1347 aa16.08■□□□□ 0.16
CPNE1-222ENST00000473373 CPDO75976 1380 aa16.08■□□□□ 0.16
CPNE1-222ENST00000473373 NINLQ9Y2I6 1382 aa16.08■□□□□ 0.16
CPNE1-222ENST00000473373 LMO7Q8WWI1 1683 aa16.08■□□□□ 0.16
CPNE1-222ENST00000473373 CSB-PGBD3P0DP91 1061 aa16.07■□□□□ 0.16
CPNE1-222ENST00000473373 R3HDM1Q15032 1099 aaKnown RBP16.07■□□□□ 0.16
CPNE1-222ENST00000473373 TESK2Q96S53 571 aa16.07■□□□□ 0.16
CPNE1-222ENST00000473373 A0A1W2PP64 1363 aa16.07■□□□□ 0.16
CPNE1-222ENST00000473373 SSH2Q76I76 1423 aa16.07■□□□□ 0.16
CPNE1-222ENST00000473373 LRP5O75197 1615 aa16.07■□□□□ 0.16
CPNE1-222ENST00000473373 CAMTA1Q9Y6Y1 1673 aa16.07■□□□□ 0.16
CPNE1-222ENST00000473373 EDC4Q6P2E9 1401 aaKnown RBP16.06■□□□□ 0.16
CPNE1-222ENST00000473373 PUS7Q96PZ0 661 aaKnown RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms