RNA–Protein interactions for RNA: ENST00000473287.1

TMCO3-206, Transcript of transmembrane and coiled-coil domains 3, humanhuman

TSL 2

Gene TMCO3, Length 459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-206ENST00000473287 SH3BP2P78314 561 aa9.89□□□□□ -0.83
TMCO3-206ENST00000473287 RC3H1Q5TC82 1133 aaKnown RBP9.89□□□□□ -0.83
TMCO3-206ENST00000473287 FAM187AA6NFU0 413 aa9.88□□□□□ -0.83
TMCO3-206ENST00000473287 CTDSPL2Q05D32 466 aa9.88□□□□□ -0.83
TMCO3-206ENST00000473287 LINC01559Q495D7 138 aa9.88□□□□□ -0.83
TMCO3-206ENST00000473287 BAP1Q92560 729 aa9.88□□□□□ -0.83
TMCO3-206ENST00000473287 DGAT1O75907 488 aa9.87□□□□□ -0.83
TMCO3-206ENST00000473287 TRAF7Q6Q0C0 670 aa9.87□□□□□ -0.83
TMCO3-206ENST00000473287 CYP4X1Q8N118 509 aa9.87□□□□□ -0.83
TMCO3-206ENST00000473287 PKDCCQ504Y2 493 aa9.86□□□□□ -0.83
TMCO3-206ENST00000473287 ZNF511Q8NB15 262 aa9.86□□□□□ -0.83
TMCO3-206ENST00000473287 PCMTD1Q96MG8 357 aaPredicted RBP9.86□□□□□ -0.83
TMCO3-206ENST00000473287 ATP1B4Q9UN42 357 aaPredicted RBP9.86□□□□□ -0.83
TMCO3-206ENST00000473287 SNIP1Q8TAD8 396 aaKnown RBP9.84□□□□□ -0.83
TMCO3-206ENST00000473287 TTC24A2A3L6 582 aaPredicted RBP9.83□□□□□ -0.84
TMCO3-206ENST00000473287 SIAH2O43255 324 aa9.83□□□□□ -0.84
TMCO3-206ENST00000473287 RFC5P40937 340 aa9.83□□□□□ -0.84
TMCO3-206ENST00000473287 MYT1Q01538 1121 aa9.83□□□□□ -0.84
TMCO3-206ENST00000473287 EHBP1Q8NDI1 1231 aa9.83□□□□□ -0.84
TMCO3-206ENST00000473287 LRRN4Q8WUT4 740 aa9.83□□□□□ -0.84
TMCO3-206ENST00000473287 AP1G2O75843 785 aa9.82□□□□□ -0.84
TMCO3-206ENST00000473287 SMPD1P17405 629 aa9.82□□□□□ -0.84
TMCO3-206ENST00000473287 J3QL48 77 aa9.81□□□□□ -0.84
TMCO3-206ENST00000473287 AVPP01185 164 aa9.8□□□□□ -0.84
TMCO3-206ENST00000473287 FOXJ1Q92949 421 aa9.8□□□□□ -0.84
TMCO3-206ENST00000473287 USP17L8P0C7I0 530 aa9.79□□□□□ -0.84
TMCO3-206ENST00000473287 VARSP26640 1264 aaKnown RBP9.78□□□□□ -0.84
TMCO3-206ENST00000473287 C4orf48Q5BLP8 95 aa9.78□□□□□ -0.84
TMCO3-206ENST00000473287 ARMC2Q8NEN0 867 aa9.78□□□□□ -0.84
TMCO3-206ENST00000473287 HMX1Q9NP08 348 aaPredicted RBP9.78□□□□□ -0.84
TMCO3-206ENST00000473287 TLL2Q9Y6L7 1015 aa9.78□□□□□ -0.84
TMCO3-206ENST00000473287 NR6A1Q15406 480 aa9.77□□□□□ -0.85
TMCO3-206ENST00000473287 CRIPAKQ8N1N5 446 aa9.77□□□□□ -0.85
TMCO3-206ENST00000473287 ST8SIA5O15466 376 aa9.76□□□□□ -0.85
TMCO3-206ENST00000473287 ALDH1A1P00352 501 aa9.76□□□□□ -0.85
TMCO3-206ENST00000473287 NBPF14Q5TI25 921 aa9.76□□□□□ -0.85
TMCO3-206ENST00000473287 SH3BP5LQ7L8J4 393 aa9.75□□□□□ -0.85
TMCO3-206ENST00000473287 SH3RF1Q7Z6J0 888 aa9.75□□□□□ -0.85
TMCO3-206ENST00000473287 EPS8L1Q8TE68 723 aa9.75□□□□□ -0.85
TMCO3-206ENST00000473287 AAASQ9NRG9 546 aa9.75□□□□□ -0.85
TMCO3-206ENST00000473287 TMEM259Q4ZIN3 620 aa9.74□□□□□ -0.85
TMCO3-206ENST00000473287 BPHLQ86WA6 291 aaPredicted RBP9.74□□□□□ -0.85
TMCO3-206ENST00000473287 MPNDQ8N594 471 aa9.74□□□□□ -0.85
TMCO3-206ENST00000473287 HPS1Q92902 700 aa9.74□□□□□ -0.85
TMCO3-206ENST00000473287 GPKOWQ92917 476 aaPredicted RBP eCLIP9.74□□□□□ -0.85
TMCO3-206ENST00000473287 FKBPLQ9UIM3 349 aa9.74□□□□□ -0.85
TMCO3-206ENST00000473287 SMCPP49901 116 aaPredicted RBP9.73□□□□□ -0.85
TMCO3-206ENST00000473287 CTC1Q2NKJ3 1217 aa9.73□□□□□ -0.85
TMCO3-206ENST00000473287 FAM174AQ8TBP5 190 aa9.73□□□□□ -0.85
TMCO3-206ENST00000473287 C1QTNF2Q9BXJ5 285 aa9.73□□□□□ -0.85
TMCO3-206ENST00000473287 AGERQ15109 404 aa9.72□□□□□ -0.85
TMCO3-206ENST00000473287 TRIM34Q9BYJ4 488 aa9.71□□□□□ -0.86
TMCO3-206ENST00000473287 ZC3H4Q9UPT8 1303 aaKnown RBP9.71□□□□□ -0.86
TMCO3-206ENST00000473287 AXIN1O15169 862 aa9.7□□□□□ -0.86
TMCO3-206ENST00000473287 PDXDC2PQ6P474 469 aa9.7□□□□□ -0.86
TMCO3-206ENST00000473287 CDK15Q96Q40 435 aa9.7□□□□□ -0.86
TMCO3-206ENST00000473287 DACH1Q9UI36 760 aa9.7□□□□□ -0.86
TMCO3-206ENST00000473287 WASF2Q9Y6W5 498 aa9.7□□□□□ -0.86
TMCO3-206ENST00000473287 GJD4Q96KN9 370 aaPredicted RBP9.69□□□□□ -0.86
TMCO3-206ENST00000473287 MAGEB6P1A0A0J9YX57 407 aa9.68□□□□□ -0.86
TMCO3-206ENST00000473287 ADH1CP00326 375 aa9.68□□□□□ -0.86
TMCO3-206ENST00000473287 OCSTAMPQ9BR26 566 aa9.68□□□□□ -0.86
TMCO3-206ENST00000473287 ERFEQ4G0M1 354 aa9.67□□□□□ -0.86
TMCO3-206ENST00000473287 TRMT44Q8IYL2 757 aaKnown RBP9.67□□□□□ -0.86
TMCO3-206ENST00000473287 BANK1Q8NDB2 785 aa9.67□□□□□ -0.86
TMCO3-206ENST00000473287 CARD14Q9BXL6 1004 aa9.67□□□□□ -0.86
TMCO3-206ENST00000473287 POTECB2RU33 542 aa9.66□□□□□ -0.86
TMCO3-206ENST00000473287 NNTQ13423 1086 aa9.66□□□□□ -0.86
TMCO3-206ENST00000473287 ARHGAP9Q9BRR9 750 aa9.66□□□□□ -0.86
TMCO3-206ENST00000473287 ARID5BQ14865 1188 aa9.65□□□□□ -0.86
TMCO3-206ENST00000473287 ZNF787Q6DD87 383 aa9.65□□□□□ -0.86
TMCO3-206ENST00000473287 MAP4K5Q9Y4K4 846 aa9.65□□□□□ -0.86
TMCO3-206ENST00000473287 GRM5P41594 1212 aa9.64□□□□□ -0.87
TMCO3-206ENST00000473287 MTMR14Q8NCE2 650 aa9.64□□□□□ -0.87
TMCO3-206ENST00000473287 GPSM3Q9Y4H4 160 aa9.64□□□□□ -0.87
TMCO3-206ENST00000473287 SOCS7O14512 581 aa9.63□□□□□ -0.87
TMCO3-206ENST00000473287 NR3C2P08235 984 aa9.63□□□□□ -0.87
TMCO3-206ENST00000473287 PNMA1Q8ND90 353 aa9.63□□□□□ -0.87
TMCO3-206ENST00000473287 SNRKQ9NRH2 765 aa9.63□□□□□ -0.87
TMCO3-206ENST00000473287 PTK2Q05397 1052 aa9.62□□□□□ -0.87
TMCO3-206ENST00000473287 KLF16Q9BXK1 252 aaPredicted RBP9.62□□□□□ -0.87
TMCO3-206ENST00000473287 ATP13A2Q9NQ11 1180 aa9.62□□□□□ -0.87
TMCO3-206ENST00000473287 GMPR2Q9P2T1 348 aaKnown RBP9.62□□□□□ -0.87
TMCO3-206ENST00000473287 CAPN5O15484 640 aaPredicted RBP9.61□□□□□ -0.87
TMCO3-206ENST00000473287 GPR37L1O60883 481 aa9.61□□□□□ -0.87
TMCO3-206ENST00000473287 TIMP2P16035 220 aa9.61□□□□□ -0.87
TMCO3-206ENST00000473287 FSHRP23945 695 aa9.61□□□□□ -0.87
TMCO3-206ENST00000473287 NR5A1Q13285 461 aa9.61□□□□□ -0.87
TMCO3-206ENST00000473287 VASH1Q7L8A9 365 aaPredicted RBP9.61□□□□□ -0.87
TMCO3-206ENST00000473287 ADAM32Q8TC27 787 aa9.61□□□□□ -0.87
TMCO3-206ENST00000473287 ZBTB33Q86T24 672 aa9.6□□□□□ -0.87
TMCO3-206ENST00000473287 WDR4P57081 412 aaKnown RBP9.59□□□□□ -0.87
TMCO3-206ENST00000473287 SLC10A4Q96EP9 437 aa9.59□□□□□ -0.87
TMCO3-206ENST00000473287 BMP1P13497 986 aa9.58□□□□□ -0.88
TMCO3-206ENST00000473287 TRIM46Q7Z4K8 759 aa9.58□□□□□ -0.88
TMCO3-206ENST00000473287 ITPKCQ96DU7 683 aa9.57□□□□□ -0.88
TMCO3-206ENST00000473287 CDV3Q9UKY7 258 aaKnown RBP9.57□□□□□ -0.88
TMCO3-206ENST00000473287 ZFAND3Q9H8U3 227 aa9.56□□□□□ -0.88
TMCO3-206ENST00000473287 NDUFB9Q9Y6M9 179 aa9.56□□□□□ -0.88
TMCO3-206ENST00000473287 ZBBXA8MT70 800 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms