RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 DZIP1LQ8IYY4 767 aaKnown RBP26.87■■□□□ 1.89
COL18A1-207ENST00000473212 NSD2O96028 1365 aa26.87■■□□□ 1.89
COL18A1-207ENST00000473212 CFAP74Q9C0B2 1584 aa26.87■■□□□ 1.89
COL18A1-207ENST00000473212 POGKQ9P215 609 aa26.86■■□□□ 1.89
COL18A1-207ENST00000473212 COL3A1P02461 1466 aaPredicted RBP26.84■■□□□ 1.89
COL18A1-207ENST00000473212 ZMYM3Q14202 1370 aa26.84■■□□□ 1.89
COL18A1-207ENST00000473212 PUS7Q96PZ0 661 aaKnown RBP26.84■■□□□ 1.89
COL18A1-207ENST00000473212 CD163L1Q9NR16 1453 aa26.84■■□□□ 1.89
COL18A1-207ENST00000473212 ANTXR1Q9H6X2 564 aa26.83■■□□□ 1.89
COL18A1-207ENST00000473212 PTPRMP28827 1452 aa26.83■■□□□ 1.88
COL18A1-207ENST00000473212 ITPRIPQ8IWB1 547 aa26.82■■□□□ 1.88
COL18A1-207ENST00000473212 TBC1D2Q9BYX2 928 aa26.82■■□□□ 1.88
COL18A1-207ENST00000473212 RIPK4P57078 832 aa26.81■■□□□ 1.88
COL18A1-207ENST00000473212 NOB1Q9ULX3 412 aaKnown RBP26.81■■□□□ 1.88
COL18A1-207ENST00000473212 SPRYD3Q8NCJ5 442 aa26.81■■□□□ 1.88
COL18A1-207ENST00000473212 NCBP3Q53F19 620 aaKnown RBP26.8■■□□□ 1.88
COL18A1-207ENST00000473212 CABP1Q9NZU7 370 aa26.8■■□□□ 1.88
COL18A1-207ENST00000473212 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.8■■□□□ 1.88
COL18A1-207ENST00000473212 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.78■■□□□ 1.88
COL18A1-207ENST00000473212 TMEM57Q8N5G2 664 aa26.77■■□□□ 1.88
COL18A1-207ENST00000473212 CDK19Q9BWU1 502 aa26.77■■□□□ 1.88
COL18A1-207ENST00000473212 SLC52A1Q9NWF4 448 aa26.77■■□□□ 1.88
COL18A1-207ENST00000473212 YTHDC2Q9H6S0 1430 aaKnown RBP26.76■■□□□ 1.88
COL18A1-207ENST00000473212 TERF2IPQ9NYB0 399 aa26.76■■□□□ 1.87
COL18A1-207ENST00000473212 ATF7IPQ6VMQ6 1270 aa26.76■■□□□ 1.87
COL18A1-207ENST00000473212 ARHGAP31Q2M1Z3 1444 aa26.75■■□□□ 1.87
COL18A1-207ENST00000473212 DIAPH1O60610 1272 aaKnown RBP26.75■■□□□ 1.87
COL18A1-207ENST00000473212 WAPLQ7Z5K2 1190 aa26.74■■□□□ 1.87
COL18A1-207ENST00000473212 THUMPD2Q9BTF0 503 aaKnown RBP26.74■■□□□ 1.87
COL18A1-207ENST00000473212 TMEM131LA2VDJ0 1609 aa26.74■■□□□ 1.87
COL18A1-207ENST00000473212 NEO1Q92859 1461 aa26.74■■□□□ 1.87
COL18A1-207ENST00000473212 CT47B1P0C2W7 299 aaPredicted RBP26.74■■□□□ 1.87
COL18A1-207ENST00000473212 RICTORQ6R327 1708 aa26.72■■□□□ 1.87
COL18A1-207ENST00000473212 MFAP1P55081 439 aaKnown RBP26.72■■□□□ 1.87
COL18A1-207ENST00000473212 CYB5RLQ6IPT4 315 aa26.72■■□□□ 1.87
COL18A1-207ENST00000473212 ATAD2Q6PL18 1390 aa26.72■■□□□ 1.87
COL18A1-207ENST00000473212 ZFYVE9O95405 1425 aa26.72■■□□□ 1.87
COL18A1-207ENST00000473212 PREX1Q8TCU6 1659 aa26.71■■□□□ 1.87
COL18A1-207ENST00000473212 HMOX1P09601 288 aa26.71■■□□□ 1.87
COL18A1-207ENST00000473212 PRKAR2BP31323 418 aa26.69■■□□□ 1.86
COL18A1-207ENST00000473212 C22orf23Q9BZE7 217 aa26.69■■□□□ 1.86
COL18A1-207ENST00000473212 HDAC1Q13547 482 aaPredicted RBP26.69■■□□□ 1.86
COL18A1-207ENST00000473212 PHACTR3Q96KR7 559 aa26.69■■□□□ 1.86
COL18A1-207ENST00000473212 DDX19BQ9UMR2 479 aa26.69■■□□□ 1.86
COL18A1-207ENST00000473212 HDGFL2Q7Z4V5 671 aaPredicted RBP26.68■■□□□ 1.86
COL18A1-207ENST00000473212 STAG3Q9UJ98 1225 aa26.67■■□□□ 1.86
COL18A1-207ENST00000473212 ZBTB40Q9NUA8 1239 aa26.67■■□□□ 1.86
COL18A1-207ENST00000473212 POLKQ9UBT6 870 aa26.66■■□□□ 1.86
COL18A1-207ENST00000473212 ZRANB1Q9UGI0 708 aa26.66■■□□□ 1.86
COL18A1-207ENST00000473212 LRRC7Q96NW7 1537 aa26.66■■□□□ 1.86
COL18A1-207ENST00000473212 ALKQ9UM73 1620 aa26.66■■□□□ 1.86
COL18A1-207ENST00000473212 ANKRD26Q9UPS8 1709 aa26.65■■□□□ 1.86
COL18A1-207ENST00000473212 ARHGEF40Q8TER5 1519 aa26.65■■□□□ 1.86
COL18A1-207ENST00000473212 PNPLA6Q8IY17 1366 aa26.65■■□□□ 1.86
COL18A1-207ENST00000473212 ELL2O00472 640 aaPredicted RBP26.65■■□□□ 1.86
COL18A1-207ENST00000473212 FAM43AQ8N2R8 423 aa26.65■■□□□ 1.86
COL18A1-207ENST00000473212 RSPH6AQ9H0K4 717 aa26.64■■□□□ 1.86
COL18A1-207ENST00000473212 EMILIN1Q9Y6C2 1016 aa26.64■■□□□ 1.85
COL18A1-207ENST00000473212 TSPYL6Q8N831 410 aa26.63■■□□□ 1.85
COL18A1-207ENST00000473212 LNPKQ9C0E8 428 aa26.63■■□□□ 1.85
COL18A1-207ENST00000473212 C1orf115Q9H7X2 142 aa26.63■■□□□ 1.85
COL18A1-207ENST00000473212 SMC5Q8IY18 1101 aa26.63■■□□□ 1.85
COL18A1-207ENST00000473212 IL16Q14005 1332 aa26.62■■□□□ 1.85
COL18A1-207ENST00000473212 NCKAP5LQ9HCH0 1330 aa26.62■■□□□ 1.85
COL18A1-207ENST00000473212 CLTCQ00610 1675 aaKnown RBP26.61■■□□□ 1.85
COL18A1-207ENST00000473212 L1TD1Q5T7N2 865 aaKnown RBP26.61■■□□□ 1.85
COL18A1-207ENST00000473212 MED14O60244 1454 aa26.6■■□□□ 1.85
COL18A1-207ENST00000473212 MCM4P33991 863 aa26.6■■□□□ 1.85
COL18A1-207ENST00000473212 ARXQ96QS3 562 aa26.59■■□□□ 1.85
COL18A1-207ENST00000473212 FCHSD2O94868 740 aa26.59■■□□□ 1.85
COL18A1-207ENST00000473212 NME9Q86XW9 330 aa26.58■■□□□ 1.85
COL18A1-207ENST00000473212 KIF20BQ96Q89 1820 aa26.58■■□□□ 1.85
COL18A1-207ENST00000473212 MLECQ14165 292 aa26.57■■□□□ 1.84
COL18A1-207ENST00000473212 CHMP5Q9NZZ3 219 aa26.57■■□□□ 1.84
COL18A1-207ENST00000473212 KIF16BQ96L93 1317 aa26.57■■□□□ 1.84
COL18A1-207ENST00000473212 FAM135BQ49AJ0 1406 aa26.57■■□□□ 1.84
COL18A1-207ENST00000473212 IPO8O15397 1037 aaKnown RBP26.55■■□□□ 1.84
COL18A1-207ENST00000473212 MAP2P11137 1827 aaKnown RBP26.55■■□□□ 1.84
COL18A1-207ENST00000473212 GZF1Q9H116 711 aaPredicted RBP26.55■■□□□ 1.84
COL18A1-207ENST00000473212 VAMP4O75379 141 aa26.53■■□□□ 1.84
COL18A1-207ENST00000473212 NUCB1Q02818 461 aa26.53■■□□□ 1.84
COL18A1-207ENST00000473212 RRS1Q15050 365 aaKnown RBP26.53■■□□□ 1.84
COL18A1-207ENST00000473212 FAM83GA6ND36 823 aa26.53■■□□□ 1.84
COL18A1-207ENST00000473212 HSCBQ8IWL3 235 aa26.53■■□□□ 1.84
COL18A1-207ENST00000473212 NFE2L2Q16236 605 aa26.51■■□□□ 1.84
COL18A1-207ENST00000473212 DCTN1Q14203 1278 aa26.51■■□□□ 1.83
COL18A1-207ENST00000473212 ALDH1L2Q3SY69 923 aa26.51■■□□□ 1.83
COL18A1-207ENST00000473212 MBIPQ9NS73 344 aa26.5■■□□□ 1.83
COL18A1-207ENST00000473212 GOLGA6L3A6NEY3 463 aa26.5■■□□□ 1.83
COL18A1-207ENST00000473212 CHD1LQ86WJ1 897 aa26.5■■□□□ 1.83
COL18A1-207ENST00000473212 MRPL50Q8N5N7 158 aaKnown RBP26.49■■□□□ 1.83
COL18A1-207ENST00000473212 PNNQ9H307 717 aaKnown RBP26.49■■□□□ 1.83
COL18A1-207ENST00000473212 PPIP5K1Q6PFW1 1433 aa26.49■■□□□ 1.83
COL18A1-207ENST00000473212 ZBTB7BO15156 539 aaPredicted RBP26.49■■□□□ 1.83
COL18A1-207ENST00000473212 XRCC6P12956 609 aaKnown RBP eCLIP26.49■■□□□ 1.83
COL18A1-207ENST00000473212 TXNDC2Q86VQ3 553 aa26.49■■□□□ 1.83
COL18A1-207ENST00000473212 IL13P35225 146 aa26.48■■□□□ 1.83
COL18A1-207ENST00000473212 RIMBP3CA6NJZ7 1639 aa26.48■■□□□ 1.83
COL18A1-207ENST00000473212 RIMBP3BA6NNM3 1639 aa26.48■■□□□ 1.83
COL18A1-207ENST00000473212 RIMBP3Q9UFD9 1639 aa26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms