RNA–Protein interactions for RNA: ENST00000473002.1

ITGA4-206, Transcript of integrin subunit alpha 4, humanhuman

TSL 3

Gene ITGA4, Length 573 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-206ENST00000473002 F12P00748 615 aaPredicted RBP10.56□□□□□ -0.72
ITGA4-206ENST00000473002 MAP10Q9P2G4 905 aa10.56□□□□□ -0.72
ITGA4-206ENST00000473002 SH3BP2P78314 561 aa10.55□□□□□ -0.72
ITGA4-206ENST00000473002 LINC01559Q495D7 138 aa10.55□□□□□ -0.72
ITGA4-206ENST00000473002 PROCA1Q8NCQ7 364 aaPredicted RBP10.55□□□□□ -0.72
ITGA4-206ENST00000473002 HELBQ8NG08 1087 aaPredicted RBP10.55□□□□□ -0.72
ITGA4-206ENST00000473002 SNIP1Q8TAD8 396 aaKnown RBP10.55□□□□□ -0.72
ITGA4-206ENST00000473002 BAP1Q92560 729 aa10.54□□□□□ -0.72
ITGA4-206ENST00000473002 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.54□□□□□ -0.72
ITGA4-206ENST00000473002 BRPF1P55201 1214 aaPredicted RBP10.53□□□□□ -0.72
ITGA4-206ENST00000473002 EHBP1Q8NDI1 1231 aa10.53□□□□□ -0.72
ITGA4-206ENST00000473002 ATP1B4Q9UN42 357 aaPredicted RBP10.53□□□□□ -0.72
ITGA4-206ENST00000473002 FBXO31Q5XUX0 539 aaPredicted RBP10.52□□□□□ -0.73
ITGA4-206ENST00000473002 ZNF511Q8NB15 262 aa10.52□□□□□ -0.73
ITGA4-206ENST00000473002 J3QL48 77 aa10.51□□□□□ -0.73
ITGA4-206ENST00000473002 AVPP01185 164 aa10.51□□□□□ -0.73
ITGA4-206ENST00000473002 SMPD1P17405 629 aa10.51□□□□□ -0.73
ITGA4-206ENST00000473002 PPP2R2DQ66LE6 453 aa10.5□□□□□ -0.73
ITGA4-206ENST00000473002 SIAH2O43255 324 aa10.49□□□□□ -0.73
ITGA4-206ENST00000473002 IL27Q8NEV9 243 aa10.49□□□□□ -0.73
ITGA4-206ENST00000473002 ST8SIA5O15466 376 aa10.48□□□□□ -0.73
ITGA4-206ENST00000473002 CTDSPL2Q05D32 466 aa10.48□□□□□ -0.73
ITGA4-206ENST00000473002 AAASQ9NRG9 546 aa10.48□□□□□ -0.73
ITGA4-206ENST00000473002 ALDH1A1P00352 501 aa10.47□□□□□ -0.73
ITGA4-206ENST00000473002 CRIPAKQ8N1N5 446 aa10.47□□□□□ -0.73
ITGA4-206ENST00000473002 GOPCQ9HD26 462 aa10.47□□□□□ -0.73
ITGA4-206ENST00000473002 VARSP26640 1264 aaKnown RBP10.45□□□□□ -0.74
ITGA4-206ENST00000473002 CTC1Q2NKJ3 1217 aa10.45□□□□□ -0.74
ITGA4-206ENST00000473002 AXIN1O15169 862 aa10.44□□□□□ -0.74
ITGA4-206ENST00000473002 ARMC2Q8NEN0 867 aa10.44□□□□□ -0.74
ITGA4-206ENST00000473002 LRRN4Q8WUT4 740 aa10.44□□□□□ -0.74
ITGA4-206ENST00000473002 HPS1Q92902 700 aa10.44□□□□□ -0.74
ITGA4-206ENST00000473002 FOXJ1Q92949 421 aa10.44□□□□□ -0.74
ITGA4-206ENST00000473002 PCMTD1Q96MG8 357 aaPredicted RBP10.44□□□□□ -0.74
ITGA4-206ENST00000473002 SMCPP49901 116 aaPredicted RBP10.43□□□□□ -0.74
ITGA4-206ENST00000473002 ZNF787Q6DD87 383 aa10.43□□□□□ -0.74
ITGA4-206ENST00000473002 TLL2Q9Y6L7 1015 aa10.43□□□□□ -0.74
ITGA4-206ENST00000473002 AP1G2O75843 785 aa10.42□□□□□ -0.74
ITGA4-206ENST00000473002 RFC5P40937 340 aa10.41□□□□□ -0.74
ITGA4-206ENST00000473002 DACH1Q9UI36 760 aa10.41□□□□□ -0.74
ITGA4-206ENST00000473002 WASF2Q9Y6W5 498 aa10.41□□□□□ -0.74
ITGA4-206ENST00000473002 AGERQ15109 404 aa10.4□□□□□ -0.74
ITGA4-206ENST00000473002 C4orf48Q5BLP8 95 aa10.4□□□□□ -0.74
ITGA4-206ENST00000473002 NBPF14Q5TI25 921 aa10.4□□□□□ -0.74
ITGA4-206ENST00000473002 BPHLQ86WA6 291 aaPredicted RBP10.4□□□□□ -0.74
ITGA4-206ENST00000473002 MPNDQ8N594 471 aa10.4□□□□□ -0.74
ITGA4-206ENST00000473002 FAM174AQ8TBP5 190 aa10.4□□□□□ -0.74
ITGA4-206ENST00000473002 PRKCSHP14314 528 aaPredicted RBP10.39□□□□□ -0.75
ITGA4-206ENST00000473002 POTECB2RU33 542 aa10.38□□□□□ -0.75
ITGA4-206ENST00000473002 USP17L8P0C7I0 530 aa10.38□□□□□ -0.75
ITGA4-206ENST00000473002 NR6A1Q15406 480 aa10.38□□□□□ -0.75
ITGA4-206ENST00000473002 SH3BP5LQ7L8J4 393 aa10.37□□□□□ -0.75
ITGA4-206ENST00000473002 SH3RF1Q7Z6J0 888 aa10.37□□□□□ -0.75
ITGA4-206ENST00000473002 GPKOWQ92917 476 aaPredicted RBP eCLIP10.37□□□□□ -0.75
ITGA4-206ENST00000473002 FKBPLQ9UIM3 349 aa10.36□□□□□ -0.75
ITGA4-206ENST00000473002 CDK15Q96Q40 435 aa10.35□□□□□ -0.75
ITGA4-206ENST00000473002 HMX1Q9NP08 348 aaPredicted RBP10.35□□□□□ -0.75
ITGA4-206ENST00000473002 UNC13AQ9UPW8 1703 aa10.34□□□□□ -0.75
ITGA4-206ENST00000473002 ARID5BQ14865 1188 aa10.34□□□□□ -0.75
ITGA4-206ENST00000473002 C1QTNF2Q9BXJ5 285 aa10.34□□□□□ -0.75
ITGA4-206ENST00000473002 MAGEB6P1A0A0J9YX57 407 aa10.33□□□□□ -0.76
ITGA4-206ENST00000473002 ADH1CP00326 375 aa10.33□□□□□ -0.76
ITGA4-206ENST00000473002 NNTQ13423 1086 aa10.33□□□□□ -0.76
ITGA4-206ENST00000473002 TMEM259Q4ZIN3 620 aa10.33□□□□□ -0.76
ITGA4-206ENST00000473002 PDXDC2PQ6P474 469 aa10.33□□□□□ -0.76
ITGA4-206ENST00000473002 EPS8L1Q8TE68 723 aa10.33□□□□□ -0.76
ITGA4-206ENST00000473002 ATP13A2Q9NQ11 1180 aa10.33□□□□□ -0.76
ITGA4-206ENST00000473002 GMPR2Q9P2T1 348 aaKnown RBP10.33□□□□□ -0.76
ITGA4-206ENST00000473002 CARD14Q9BXL6 1004 aa10.32□□□□□ -0.76
ITGA4-206ENST00000473002 ZC3H4Q9UPT8 1303 aaKnown RBP10.32□□□□□ -0.76
ITGA4-206ENST00000473002 CAPN5O15484 640 aaPredicted RBP10.3□□□□□ -0.76
ITGA4-206ENST00000473002 TRMT44Q8IYL2 757 aaKnown RBP10.3□□□□□ -0.76
ITGA4-206ENST00000473002 ERFEQ4G0M1 354 aa10.29□□□□□ -0.76
ITGA4-206ENST00000473002 ARHGAP9Q9BRR9 750 aa10.29□□□□□ -0.76
ITGA4-206ENST00000473002 GRM5P41594 1212 aa10.28□□□□□ -0.76
ITGA4-206ENST00000473002 NR5A1Q13285 461 aa10.28□□□□□ -0.76
ITGA4-206ENST00000473002 MAP4K5Q9Y4K4 846 aa10.28□□□□□ -0.76
ITGA4-206ENST00000473002 C11orf95C9JLR9 678 aaPredicted RBP10.27□□□□□ -0.77
ITGA4-206ENST00000473002 NR3C2P08235 984 aa10.27□□□□□ -0.77
ITGA4-206ENST00000473002 PNMA1Q8ND90 353 aa10.27□□□□□ -0.77
ITGA4-206ENST00000473002 TRIM34Q9BYJ4 488 aa10.27□□□□□ -0.77
ITGA4-206ENST00000473002 BMP1P13497 986 aa10.26□□□□□ -0.77
ITGA4-206ENST00000473002 TIMP2P16035 220 aa10.26□□□□□ -0.77
ITGA4-206ENST00000473002 WDR4P57081 412 aaKnown RBP10.26□□□□□ -0.77
ITGA4-206ENST00000473002 VASH1Q7L8A9 365 aaPredicted RBP10.26□□□□□ -0.77
ITGA4-206ENST00000473002 OCSTAMPQ9BR26 566 aa10.26□□□□□ -0.77
ITGA4-206ENST00000473002 KLF16Q9BXK1 252 aaPredicted RBP10.26□□□□□ -0.77
ITGA4-206ENST00000473002 GPSM3Q9Y4H4 160 aa10.26□□□□□ -0.77
ITGA4-206ENST00000473002 FSHRP23945 695 aa10.25□□□□□ -0.77
ITGA4-206ENST00000473002 PTK2Q05397 1052 aa10.25□□□□□ -0.77
ITGA4-206ENST00000473002 ZBTB33Q86T24 672 aa10.25□□□□□ -0.77
ITGA4-206ENST00000473002 ZNF775Q96BV0 537 aaPredicted RBP10.25□□□□□ -0.77
ITGA4-206ENST00000473002 SENP2Q9HC62 589 aa10.25□□□□□ -0.77
ITGA4-206ENST00000473002 TRIM46Q7Z4K8 759 aa10.24□□□□□ -0.77
ITGA4-206ENST00000473002 GJD4Q96KN9 370 aaPredicted RBP10.24□□□□□ -0.77
ITGA4-206ENST00000473002 TRIM47Q96LD4 638 aa10.24□□□□□ -0.77
ITGA4-206ENST00000473002 BANK1Q8NDB2 785 aa10.23□□□□□ -0.77
ITGA4-206ENST00000473002 SLC10A4Q96EP9 437 aa10.23□□□□□ -0.77
ITGA4-206ENST00000473002 ZIC2O95409 532 aaPredicted RBP10.22□□□□□ -0.77
ITGA4-206ENST00000473002 ADAM32Q8TC27 787 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms