RNA–Protein interactions for RNA: ENST00000472911.1

SMTN-215, Transcript of smoothelin, humanhuman

TSL 2

Gene SMTN, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-215ENST00000472911 ST20-MTHFSA0A0A6YYL1 179 aa17.07■□□□□ 0.32
SMTN-215ENST00000472911 SRPK2P78362 688 aaKnown RBP17.07■□□□□ 0.32
SMTN-215ENST00000472911 GLI3P10071 1580 aa17.06■□□□□ 0.32
SMTN-215ENST00000472911 BRWD3Q6RI45 1802 aa17.05■□□□□ 0.32
SMTN-215ENST00000472911 TESK2Q96S53 571 aa17.05■□□□□ 0.32
SMTN-215ENST00000472911 CCDC61Q9Y6R9 512 aa17.05■□□□□ 0.32
SMTN-215ENST00000472911 PPIP5K1Q6PFW1 1433 aa17.04■□□□□ 0.32
SMTN-215ENST00000472911 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.04■□□□□ 0.32
SMTN-215ENST00000472911 AKAP12Q02952 1782 aa17.03■□□□□ 0.32
SMTN-215ENST00000472911 KRT28Q7Z3Y7 464 aa17.03■□□□□ 0.32
SMTN-215ENST00000472911 ALS2Q96Q42 1657 aa17.03■□□□□ 0.32
SMTN-215ENST00000472911 PLEKHG3A1L390 1219 aa17.02■□□□□ 0.32
SMTN-215ENST00000472911 POLR3AO14802 1390 aaPredicted RBP17.02■□□□□ 0.31
SMTN-215ENST00000472911 PSME1Q06323 249 aa17.01■□□□□ 0.31
SMTN-215ENST00000472911 NGDNQ8NEJ9 315 aaKnown RBP17.01■□□□□ 0.31
SMTN-215ENST00000472911 ACEP12821 1306 aa17■□□□□ 0.31
SMTN-215ENST00000472911 SPATA31A3Q5VYP0 1347 aa17■□□□□ 0.31
SMTN-215ENST00000472911 TNS3Q68CZ2 1445 aa17■□□□□ 0.31
SMTN-215ENST00000472911 UNC5CLQ8IV45 518 aa17■□□□□ 0.31
SMTN-215ENST00000472911 SLIT2O94813 1529 aa17■□□□□ 0.31
SMTN-215ENST00000472911 SBNO1A3KN83 1393 aa17■□□□□ 0.31
SMTN-215ENST00000472911 ABCA3Q99758 1704 aa16.99■□□□□ 0.31
SMTN-215ENST00000472911 PSDA5PKW4 1024 aaPredicted RBP16.99■□□□□ 0.31
SMTN-215ENST00000472911 SF3B2Q13435 895 aaKnown RBP16.99■□□□□ 0.31
SMTN-215ENST00000472911 CABP1Q9NZU7 370 aa16.98■□□□□ 0.31
SMTN-215ENST00000472911 MON2Q7Z3U7 1717 aa16.97■□□□□ 0.31
SMTN-215ENST00000472911 CRYBG1Q9Y4K1 1723 aa16.97■□□□□ 0.31
SMTN-215ENST00000472911 SEPT12Q8IYM1 358 aa16.96■□□□□ 0.31
SMTN-215ENST00000472911 NRKQ7Z2Y5 1582 aa16.95■□□□□ 0.3
SMTN-215ENST00000472911 HSPA5P11021 654 aaKnown RBP16.95■□□□□ 0.3
SMTN-215ENST00000472911 EIF4G2P78344 907 aaKnown RBP eCLIP16.95■□□□□ 0.3
SMTN-215ENST00000472911 PUS7Q96PZ0 661 aaKnown RBP16.95■□□□□ 0.3
SMTN-215ENST00000472911 MYOM1P52179 1685 aa16.94■□□□□ 0.3
SMTN-215ENST00000472911 CD163L1Q9NR16 1453 aa16.94■□□□□ 0.3
SMTN-215ENST00000472911 SLC24A1O60721 1099 aa16.94■□□□□ 0.3
SMTN-215ENST00000472911 TMF1P82094 1093 aa16.94■□□□□ 0.3
SMTN-215ENST00000472911 USP6P35125 1406 aa16.94■□□□□ 0.3
SMTN-215ENST00000472911 ARHGEF10O15013 1369 aa16.93■□□□□ 0.3
SMTN-215ENST00000472911 CPSF1Q10570 1443 aaKnown RBP16.93■□□□□ 0.3
SMTN-215ENST00000472911 PAK3O75914 559 aaPredicted RBP16.92■□□□□ 0.3
SMTN-215ENST00000472911 LMOD2Q6P5Q4 547 aa16.92■□□□□ 0.3
SMTN-215ENST00000472911 PIK3C2AO00443 1686 aa16.91■□□□□ 0.3
SMTN-215ENST00000472911 SSH2Q76I76 1423 aa16.91■□□□□ 0.3
SMTN-215ENST00000472911 ONECUT3O60422 494 aaPredicted RBP16.91■□□□□ 0.3
SMTN-215ENST00000472911 SLC12A5Q9H2X9 1139 aa16.91■□□□□ 0.3
SMTN-215ENST00000472911 PHRF1Q9P1Y6 1649 aaKnown RBP16.91■□□□□ 0.3
SMTN-215ENST00000472911 KRT27Q7Z3Y8 459 aa16.9■□□□□ 0.3
SMTN-215ENST00000472911 TMC1Q8TDI8 760 aa16.9■□□□□ 0.3
SMTN-215ENST00000472911 BRD4O60885 1362 aaPredicted RBP16.89■□□□□ 0.3
SMTN-215ENST00000472911 BAG6P46379 1132 aa16.89■□□□□ 0.29
SMTN-215ENST00000472911 VPS72Q15906 364 aa16.89■□□□□ 0.29
SMTN-215ENST00000472911 CABLES1Q8TDN4 633 aa16.89■□□□□ 0.29
SMTN-215ENST00000472911 NINLQ9Y2I6 1382 aa16.89■□□□□ 0.29
SMTN-215ENST00000472911 PLEKHG5O94827 1062 aa16.88■□□□□ 0.29
SMTN-215ENST00000472911 ZNF692Q9BU19 519 aaPredicted RBP16.88■□□□□ 0.29
SMTN-215ENST00000472911 KTN1Q86UP2 1357 aaKnown RBP16.88■□□□□ 0.29
SMTN-215ENST00000472911 CDCA8Q53HL2 280 aa16.87■□□□□ 0.29
SMTN-215ENST00000472911 PLCH1Q4KWH8 1693 aa16.87■□□□□ 0.29
SMTN-215ENST00000472911 A0A1W2PP64 1363 aa16.87■□□□□ 0.29
SMTN-215ENST00000472911 NUTM2GQ5VZR2 741 aa16.86■□□□□ 0.29
SMTN-215ENST00000472911 NWD2Q9ULI1 1742 aa16.86■□□□□ 0.29
SMTN-215ENST00000472911 USP54Q70EL1 1684 aa16.85■□□□□ 0.29
SMTN-215ENST00000472911 EN1Q05925 392 aaPredicted RBP16.85■□□□□ 0.29
SMTN-215ENST00000472911 R3HDM1Q15032 1099 aaKnown RBP16.85■□□□□ 0.29
SMTN-215ENST00000472911 ABTB2Q8N961 1025 aa16.85■□□□□ 0.29
SMTN-215ENST00000472911 CCDC9Q9Y3X0 531 aaKnown RBP16.85■□□□□ 0.29
SMTN-215ENST00000472911 TTC21BQ7Z4L5 1316 aa16.85■□□□□ 0.29
SMTN-215ENST00000472911 HDGFL2Q7Z4V5 671 aaPredicted RBP16.84■□□□□ 0.29
SMTN-215ENST00000472911 C11orf95C9JLR9 678 aaPredicted RBP16.83■□□□□ 0.28
SMTN-215ENST00000472911 EDC4Q6P2E9 1401 aaKnown RBP16.83■□□□□ 0.28
SMTN-215ENST00000472911 ANKRD36BQ8N2N9 1353 aa16.83■□□□□ 0.28
SMTN-215ENST00000472911 TERF2IPQ9NYB0 399 aa16.83■□□□□ 0.28
SMTN-215ENST00000472911 USP19O94966 1318 aa16.82■□□□□ 0.28
SMTN-215ENST00000472911 TTC21AQ8NDW8 1320 aa16.82■□□□□ 0.28
SMTN-215ENST00000472911 HAP1P54257 671 aaPredicted RBP16.82■□□□□ 0.28
SMTN-215ENST00000472911 RGPD1P0DJD0 1748 aa16.82■□□□□ 0.28
SMTN-215ENST00000472911 SLIT3O75094 1523 aa16.81■□□□□ 0.28
SMTN-215ENST00000472911 YY1P25490 414 aa16.81■□□□□ 0.28
SMTN-215ENST00000472911 KIF20BQ96Q89 1820 aa16.81■□□□□ 0.28
SMTN-215ENST00000472911 COL14A1Q05707 1796 aaKnown RBP16.81■□□□□ 0.28
SMTN-215ENST00000472911 A0A0G2JS52 829 aa16.8■□□□□ 0.28
SMTN-215ENST00000472911 MYT1Q01538 1121 aa16.8■□□□□ 0.28
SMTN-215ENST00000472911 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.8■□□□□ 0.28
SMTN-215ENST00000472911 POLR3GLQ9BT43 218 aa16.8■□□□□ 0.28
SMTN-215ENST00000472911 NRAPQ86VF7 1730 aa16.79■□□□□ 0.28
SMTN-215ENST00000472911 NLRP6P59044 892 aa16.79■□□□□ 0.28
SMTN-215ENST00000472911 FAM98CQ17RN3 349 aaKnown RBP16.79■□□□□ 0.28
SMTN-215ENST00000472911 NLRP13Q86W25 1043 aa16.79■□□□□ 0.28
SMTN-215ENST00000472911 FAM182BQ5T319 152 aa16.78■□□□□ 0.28
SMTN-215ENST00000472911 NME9Q86XW9 330 aa16.78■□□□□ 0.28
SMTN-215ENST00000472911 DISP2A7MBM2 1401 aa16.78■□□□□ 0.28
SMTN-215ENST00000472911 USP31Q70CQ4 1352 aa16.77■□□□□ 0.28
SMTN-215ENST00000472911 TNS1Q9HBL0 1735 aaKnown RBP16.77■□□□□ 0.28
SMTN-215ENST00000472911 FAM83GA6ND36 823 aa16.77■□□□□ 0.28
SMTN-215ENST00000472911 ZEB1P37275 1124 aaPredicted RBP16.77■□□□□ 0.28
SMTN-215ENST00000472911 KIF7Q2M1P5 1343 aa16.76■□□□□ 0.27
SMTN-215ENST00000472911 KIAA0232Q92628 1395 aa16.76■□□□□ 0.27
SMTN-215ENST00000472911 NFAT5O94916 1531 aa16.75■□□□□ 0.27
SMTN-215ENST00000472911 LMO7Q8WWI1 1683 aa16.75■□□□□ 0.27
SMTN-215ENST00000472911 LTN1O94822 1766 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms