RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 TTLL12Q14166 644 aaPredicted RBP6.07□□□□□ -1.44
XRN1-209ENST00000472625 FBXO31Q5XUX0 539 aaPredicted RBP6.07□□□□□ -1.44
XRN1-209ENST00000472625 BRICD5Q6PL45 260 aa6.07□□□□□ -1.44
XRN1-209ENST00000472625 TRAF7Q6Q0C0 670 aa6.07□□□□□ -1.44
XRN1-209ENST00000472625 PLEKHG3A1L390 1219 aa6.06□□□□□ -1.44
XRN1-209ENST00000472625 ZNF598Q86UK7 904 aaKnown RBP6.06□□□□□ -1.44
XRN1-209ENST00000472625 BEGAINQ9BUH8 593 aa6.06□□□□□ -1.44
XRN1-209ENST00000472625 FAM69CQ0P6D2 419 aa6.05□□□□□ -1.44
XRN1-209ENST00000472625 FOXC1Q12948 553 aa6.05□□□□□ -1.44
XRN1-209ENST00000472625 SALL2Q9Y467 1007 aaPredicted RBP6.05□□□□□ -1.44
XRN1-209ENST00000472625 DIP2BQ9P265 1576 aa6.05□□□□□ -1.44
XRN1-209ENST00000472625 MOXD2PA6NHM9 499 aa6.04□□□□□ -1.44
XRN1-209ENST00000472625 NDUFV2P19404 249 aa6.04□□□□□ -1.44
XRN1-209ENST00000472625 BRPF1P55201 1214 aaPredicted RBP6.04□□□□□ -1.44
XRN1-209ENST00000472625 SYMPKQ92797 1274 aaKnown RBP6.04□□□□□ -1.44
XRN1-209ENST00000472625 FAM117AQ9C073 453 aa6.04□□□□□ -1.44
XRN1-209ENST00000472625 KDM4CQ9H3R0 1056 aa6.04□□□□□ -1.44
XRN1-209ENST00000472625 PLB1Q6P1J6 1458 aa6.03□□□□□ -1.44
XRN1-209ENST00000472625 PTPRGP23470 1445 aa6.03□□□□□ -1.44
XRN1-209ENST00000472625 FAM187AA6NFU0 413 aa6.03□□□□□ -1.44
XRN1-209ENST00000472625 GDF9O60383 454 aa6.03□□□□□ -1.44
XRN1-209ENST00000472625 TBC1D2Q9BYX2 928 aa6.03□□□□□ -1.44
XRN1-209ENST00000472625 ABCC2Q92887 1545 aa6.03□□□□□ -1.44
XRN1-209ENST00000472625 IGF1RP08069 1367 aa6.03□□□□□ -1.44
XRN1-209ENST00000472625 TNIKQ9UKE5 1360 aa6.03□□□□□ -1.44
XRN1-209ENST00000472625 KDM6BO15054 1643 aa6.03□□□□□ -1.44
XRN1-209ENST00000472625 ADCY10Q96PN6 1610 aa6.03□□□□□ -1.44
XRN1-209ENST00000472625 KIF13AQ9H1H9 1805 aa6.02□□□□□ -1.45
XRN1-209ENST00000472625 USP46P62068 366 aa6.02□□□□□ -1.45
XRN1-209ENST00000472625 GRIPAP1Q4V328 841 aa6.02□□□□□ -1.45
XRN1-209ENST00000472625 MYSM1Q5VVJ2 828 aa6.02□□□□□ -1.45
XRN1-209ENST00000472625 PKD2L1Q9P0L9 805 aa6.02□□□□□ -1.45
XRN1-209ENST00000472625 LIMD1Q9UGP4 676 aa6.02□□□□□ -1.45
XRN1-209ENST00000472625 PCDHB15Q9Y5E8 787 aa6.02□□□□□ -1.45
XRN1-209ENST00000472625 CARMIL1Q5VZK9 1371 aa6.02□□□□□ -1.45
XRN1-209ENST00000472625 IQGAP2Q13576 1575 aa6.01□□□□□ -1.45
XRN1-209ENST00000472625 MSS51Q4VC12 460 aa6.01□□□□□ -1.45
XRN1-209ENST00000472625 RSBN1LQ6PCB5 846 aaPredicted RBP6.01□□□□□ -1.45
XRN1-209ENST00000472625 UHRF1BP1LA0JNW5 1464 aa6.01□□□□□ -1.45
XRN1-209ENST00000472625 TEX14Q8IWB6 1497 aa6.01□□□□□ -1.45
XRN1-209ENST00000472625 SPTLC1O15269 473 aa6□□□□□ -1.45
XRN1-209ENST00000472625 PRR20EP86478 221 aa6□□□□□ -1.45
XRN1-209ENST00000472625 PRR20CP86479 221 aa6□□□□□ -1.45
XRN1-209ENST00000472625 PRR20DP86480 221 aa6□□□□□ -1.45
XRN1-209ENST00000472625 PRR20BP86481 221 aa6□□□□□ -1.45
XRN1-209ENST00000472625 PRR20AP86496 221 aa6□□□□□ -1.45
XRN1-209ENST00000472625 PKDCCQ504Y2 493 aa6□□□□□ -1.45
XRN1-209ENST00000472625 FAM9AQ8IZU1 332 aaPredicted RBP6□□□□□ -1.45
XRN1-209ENST00000472625 GLI2P10070 1586 aa5.99□□□□□ -1.45
XRN1-209ENST00000472625 ST8SIA5O15466 376 aa5.99□□□□□ -1.45
XRN1-209ENST00000472625 FDX1P10109 184 aa5.99□□□□□ -1.45
XRN1-209ENST00000472625 GJA5P36382 358 aa5.99□□□□□ -1.45
XRN1-209ENST00000472625 MMP16P51512 607 aa5.99□□□□□ -1.45
XRN1-209ENST00000472625 Q3C1V9 767 aa5.99□□□□□ -1.45
XRN1-209ENST00000472625 NUTM1Q86Y26 1132 aa5.99□□□□□ -1.45
XRN1-209ENST00000472625 CCDC24Q8N4L8 307 aa5.99□□□□□ -1.45
XRN1-209ENST00000472625 USB1Q9BQ65 265 aaKnown RBP5.99□□□□□ -1.45
XRN1-209ENST00000472625 UACAQ9BZF9 1416 aa5.99□□□□□ -1.45
XRN1-209ENST00000472625 GOLGA3Q08378 1498 aa5.98□□□□□ -1.45
XRN1-209ENST00000472625 RAPGEF2Q9Y4G8 1499 aa5.98□□□□□ -1.45
XRN1-209ENST00000472625 DXOO77932 396 aaKnown RBP5.98□□□□□ -1.45
XRN1-209ENST00000472625 MYT1Q01538 1121 aa5.98□□□□□ -1.45
XRN1-209ENST00000472625 QPCTQ16769 361 aa5.98□□□□□ -1.45
XRN1-209ENST00000472625 ASXL2Q76L83 1435 aa5.98□□□□□ -1.45
XRN1-209ENST00000472625 RPIAP49247 311 aa5.97□□□□□ -1.45
XRN1-209ENST00000472625 TUSC1Q2TAM9 212 aa5.97□□□□□ -1.45
XRN1-209ENST00000472625 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.97□□□□□ -1.45
XRN1-209ENST00000472625 UGGT2Q9NYU1 1516 aa5.97□□□□□ -1.45
XRN1-209ENST00000472625 KDM5BQ9UGL1 1544 aa5.96□□□□□ -1.46
XRN1-209ENST00000472625 POTECB2RU33 542 aa5.96□□□□□ -1.46
XRN1-209ENST00000472625 CFAP99D6REC4 459 aa5.96□□□□□ -1.46
XRN1-209ENST00000472625 ZBTB24O43167 697 aaPredicted RBP5.96□□□□□ -1.46
XRN1-209ENST00000472625 TRIM32Q13049 653 aa5.96□□□□□ -1.46
XRN1-209ENST00000472625 ZNF787Q6DD87 383 aa5.96□□□□□ -1.46
XRN1-209ENST00000472625 RIC3Q7Z5B4 369 aa5.96□□□□□ -1.46
XRN1-209ENST00000472625 CABLES1Q8TDN4 633 aa5.96□□□□□ -1.46
XRN1-209ENST00000472625 C6orf229H3BNL8 230 aa5.95□□□□□ -1.46
XRN1-209ENST00000472625 LILRB3O75022 631 aa5.95□□□□□ -1.46
XRN1-209ENST00000472625 DGAT1O75907 488 aa5.95□□□□□ -1.46
XRN1-209ENST00000472625 CD2BP2O95400 341 aaKnown RBP5.95□□□□□ -1.46
XRN1-209ENST00000472625 HRCP23327 699 aa5.95□□□□□ -1.46
XRN1-209ENST00000472625 KIAA0556O60303 1618 aa5.95□□□□□ -1.46
XRN1-209ENST00000472625 WDR7Q9Y4E6 1490 aa5.95□□□□□ -1.46
XRN1-209ENST00000472625 EPRSP07814 1512 aaKnown RBP5.94□□□□□ -1.46
XRN1-209ENST00000472625 DISP1Q96F81 1524 aa5.94□□□□□ -1.46
XRN1-209ENST00000472625 JUNDP17535 347 aa5.94□□□□□ -1.46
XRN1-209ENST00000472625 SH3D19Q5HYK7 790 aa5.94□□□□□ -1.46
XRN1-209ENST00000472625 RTL5Q5HYW3 569 aaPredicted RBP5.94□□□□□ -1.46
XRN1-209ENST00000472625 RETREG3Q86VR2 466 aa5.94□□□□□ -1.46
XRN1-209ENST00000472625 CYP4X1Q8N118 509 aa5.94□□□□□ -1.46
XRN1-209ENST00000472625 PROCA1Q8NCQ7 364 aaPredicted RBP5.94□□□□□ -1.46
XRN1-209ENST00000472625 TOR4AQ9NXH8 423 aa5.94□□□□□ -1.46
XRN1-209ENST00000472625 DACH1Q9UI36 760 aa5.94□□□□□ -1.46
XRN1-209ENST00000472625 CLK2P49760 499 aaKnown RBP5.93□□□□□ -1.46
XRN1-209ENST00000472625 SKOR1P84550 965 aa5.93□□□□□ -1.46
XRN1-209ENST00000472625 MTMR2Q13614 643 aa5.93□□□□□ -1.46
XRN1-209ENST00000472625 NEUROD2Q15784 382 aa5.93□□□□□ -1.46
XRN1-209ENST00000472625 MAP3K4Q9Y6R4 1608 aa5.92□□□□□ -1.46
XRN1-209ENST00000472625 ADGRL1O94910 1474 aa5.92□□□□□ -1.46
XRN1-209ENST00000472625 TTC24A2A3L6 582 aaPredicted RBP5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms