RNA–Protein interactions for RNA: ENST00000472390.1

RHBDF1-207, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 4

Gene RHBDF1, Length 577 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-207ENST00000472390 A0A0G2JS52 829 aa27.71■■■□□ 2.03
RHBDF1-207ENST00000472390 MYT1Q01538 1121 aa27.71■■■□□ 2.03
RHBDF1-207ENST00000472390 NGDNQ8NEJ9 315 aaKnown RBP27.71■■■□□ 2.03
RHBDF1-207ENST00000472390 EIF3AQ14152 1382 aaKnown RBP27.71■■■□□ 2.03
RHBDF1-207ENST00000472390 PAK3O75914 559 aaPredicted RBP27.7■■■□□ 2.02
RHBDF1-207ENST00000472390 FAM98CQ17RN3 349 aaKnown RBP27.69■■■□□ 2.02
RHBDF1-207ENST00000472390 CCDC125Q86Z20 511 aa27.68■■■□□ 2.02
RHBDF1-207ENST00000472390 FAM182BQ5T319 152 aa27.67■■■□□ 2.02
RHBDF1-207ENST00000472390 NUTM2GQ5VZR2 741 aa27.67■■■□□ 2.02
RHBDF1-207ENST00000472390 KRT27Q7Z3Y8 459 aa27.67■■■□□ 2.02
RHBDF1-207ENST00000472390 NUDT16Q96DE0 195 aaKnown RBP27.67■■■□□ 2.02
RHBDF1-207ENST00000472390 ONECUT3O60422 494 aaPredicted RBP27.66■■■□□ 2.02
RHBDF1-207ENST00000472390 NBPF1Q3BBV0 1214 aa27.64■■■□□ 2.02
RHBDF1-207ENST00000472390 THSD7AQ9UPZ6 1657 aa27.64■■■□□ 2.02
RHBDF1-207ENST00000472390 KIAA1210Q9ULL0 1709 aa27.64■■■□□ 2.01
RHBDF1-207ENST00000472390 CHRNA2Q15822 529 aa27.63■■■□□ 2.01
RHBDF1-207ENST00000472390 CDK19Q9BWU1 502 aa27.63■■■□□ 2.01
RHBDF1-207ENST00000472390 KIAA0232Q92628 1395 aa27.61■■■□□ 2.01
RHBDF1-207ENST00000472390 PRDM11Q9NQV5 511 aa27.61■■■□□ 2.01
RHBDF1-207ENST00000472390 HRCP23327 699 aa27.6■■■□□ 2.01
RHBDF1-207ENST00000472390 NRKQ7Z2Y5 1582 aa27.59■■■□□ 2.01
RHBDF1-207ENST00000472390 SPATA31A5Q5VU36 1347 aa27.59■■■□□ 2.01
RHBDF1-207ENST00000472390 SPATA31A7Q8IWB4 1347 aa27.59■■■□□ 2.01
RHBDF1-207ENST00000472390 SF3B2Q13435 895 aaKnown RBP27.57■■■□□ 2
RHBDF1-207ENST00000472390 ACEP12821 1306 aa27.57■■■□□ 2
RHBDF1-207ENST00000472390 TNS1Q9HBL0 1735 aaKnown RBP27.56■■■□□ 2
RHBDF1-207ENST00000472390 ZC3H6P61129 1189 aaKnown RBP27.56■■■□□ 2
RHBDF1-207ENST00000472390 STAC3Q96MF2 364 aa27.56■■■□□ 2
RHBDF1-207ENST00000472390 POLR3AO14802 1390 aaPredicted RBP27.55■■■□□ 2
RHBDF1-207ENST00000472390 QRICH2Q9H0J4 1663 aa27.55■■■□□ 2
RHBDF1-207ENST00000472390 RGPD1P0DJD0 1748 aa27.54■■■□□ 2
RHBDF1-207ENST00000472390 STRN4Q9NRL3 753 aa27.54■■■□□ 2
RHBDF1-207ENST00000472390 PSDA5PKW4 1024 aaPredicted RBP27.53■■■□□ 2
RHBDF1-207ENST00000472390 NBPF8Q3BBV2 869 aa27.5■■□□□ 1.99
RHBDF1-207ENST00000472390 SPATA31A1Q5TZJ5 1347 aa27.49■■□□□ 1.99
RHBDF1-207ENST00000472390 CABP2Q9NPB3 220 aa27.49■■□□□ 1.99
RHBDF1-207ENST00000472390 LMO7Q8WWI1 1683 aa27.49■■□□□ 1.99
RHBDF1-207ENST00000472390 CAMTA1Q9Y6Y1 1673 aa27.49■■□□□ 1.99
RHBDF1-207ENST00000472390 PPIP5K1Q6PFW1 1433 aa27.49■■□□□ 1.99
RHBDF1-207ENST00000472390 EN1Q05925 392 aaPredicted RBP27.48■■□□□ 1.99
RHBDF1-207ENST00000472390 USP35Q9P2H5 1018 aa27.48■■□□□ 1.99
RHBDF1-207ENST00000472390 CCDC61Q9Y6R9 512 aa27.48■■□□□ 1.99
RHBDF1-207ENST00000472390 PLEKHG3A1L390 1219 aa27.46■■□□□ 1.99
RHBDF1-207ENST00000472390 BAG6P46379 1132 aa27.46■■□□□ 1.99
RHBDF1-207ENST00000472390 CENPJQ9HC77 1338 aaPredicted RBP27.45■■□□□ 1.99
RHBDF1-207ENST00000472390 SSH2Q76I76 1423 aa27.45■■□□□ 1.98
RHBDF1-207ENST00000472390 SRPK2P78362 688 aaKnown RBP27.45■■□□□ 1.98
RHBDF1-207ENST00000472390 LRP5O75197 1615 aa27.44■■□□□ 1.98
RHBDF1-207ENST00000472390 USP19O94966 1318 aa27.43■■□□□ 1.98
RHBDF1-207ENST00000472390 ABTB2Q8N961 1025 aa27.43■■□□□ 1.98
RHBDF1-207ENST00000472390 TRPM1Q7Z4N2 1603 aa27.42■■□□□ 1.98
RHBDF1-207ENST00000472390 LARP1Q6PKG0 1096 aaKnown RBP27.42■■□□□ 1.98
RHBDF1-207ENST00000472390 SIN3AQ96ST3 1273 aa27.41■■□□□ 1.98
RHBDF1-207ENST00000472390 L3MBTL2Q969R5 705 aa27.4■■□□□ 1.98
RHBDF1-207ENST00000472390 ZBTB7CA1YPR0 619 aa27.39■■□□□ 1.98
RHBDF1-207ENST00000472390 PIK3C2AO00443 1686 aa27.38■■□□□ 1.97
RHBDF1-207ENST00000472390 TRIM37O94972 964 aa27.38■■□□□ 1.97
RHBDF1-207ENST00000472390 EZH2Q15910 746 aaKnown RBP27.38■■□□□ 1.97
RHBDF1-207ENST00000472390 CPDO75976 1380 aa27.35■■□□□ 1.97
RHBDF1-207ENST00000472390 DISP2A7MBM2 1401 aa27.35■■□□□ 1.97
RHBDF1-207ENST00000472390 USP6P35125 1406 aa27.35■■□□□ 1.97
RHBDF1-207ENST00000472390 EVA1CP58658 441 aa27.35■■□□□ 1.97
RHBDF1-207ENST00000472390 R3HDM1Q15032 1099 aaKnown RBP27.35■■□□□ 1.97
RHBDF1-207ENST00000472390 CABP1Q9NZU7 370 aa27.35■■□□□ 1.97
RHBDF1-207ENST00000472390 COL5A2P05997 1499 aaPredicted RBP27.34■■□□□ 1.97
RHBDF1-207ENST00000472390 SLIT3O75094 1523 aa27.32■■□□□ 1.96
RHBDF1-207ENST00000472390 GCP02774 474 aa27.32■■□□□ 1.96
RHBDF1-207ENST00000472390 RREB1Q92766 1687 aa27.31■■□□□ 1.96
RHBDF1-207ENST00000472390 NUP188Q5SRE5 1749 aa27.31■■□□□ 1.96
RHBDF1-207ENST00000472390 PARP4Q9UKK3 1724 aaKnown RBP27.3■■□□□ 1.96
RHBDF1-207ENST00000472390 NEUROD1Q13562 356 aa27.3■■□□□ 1.96
RHBDF1-207ENST00000472390 NLRP13Q86W25 1043 aa27.3■■□□□ 1.96
RHBDF1-207ENST00000472390 BARGINQ6ZT62 677 aa27.29■■□□□ 1.96
RHBDF1-207ENST00000472390 CAMKK2Q96RR4 588 aa27.29■■□□□ 1.96
RHBDF1-207ENST00000472390 COL18A1P39060 1754 aa27.29■■□□□ 1.96
RHBDF1-207ENST00000472390 AKAP12Q02952 1782 aa27.29■■□□□ 1.96
RHBDF1-207ENST00000472390 LRRC37A3O60309 1634 aa27.28■■□□□ 1.96
RHBDF1-207ENST00000472390 FAM196AQ6ZSG2 479 aa27.28■■□□□ 1.96
RHBDF1-207ENST00000472390 TCP11L2Q8N4U5 519 aa27.28■■□□□ 1.96
RHBDF1-207ENST00000472390 NLRP6P59044 892 aa27.27■■□□□ 1.96
RHBDF1-207ENST00000472390 RGPD5Q99666 1765 aa27.27■■□□□ 1.96
RHBDF1-207ENST00000472390 WNK3Q9BYP7 1800 aa27.26■■□□□ 1.95
RHBDF1-207ENST00000472390 APBA3O96018 575 aa27.26■■□□□ 1.95
RHBDF1-207ENST00000472390 PDE3BQ13370 1112 aa27.25■■□□□ 1.95
RHBDF1-207ENST00000472390 PEAK1Q9H792 1746 aa27.24■■□□□ 1.95
RHBDF1-207ENST00000472390 ROCK2O75116 1388 aaKnown RBP27.24■■□□□ 1.95
RHBDF1-207ENST00000472390 SOX12O15370 315 aa27.23■■□□□ 1.95
RHBDF1-207ENST00000472390 CRB1P82279 1406 aa27.23■■□□□ 1.95
RHBDF1-207ENST00000472390 EVC2Q86UK5 1308 aa27.2■■□□□ 1.95
RHBDF1-207ENST00000472390 AXIN2Q9Y2T1 843 aa27.2■■□□□ 1.94
RHBDF1-207ENST00000472390 SBF2Q86WG5 1849 aa27.19■■□□□ 1.94
RHBDF1-207ENST00000472390 AATKQ6ZMQ8 1374 aa27.19■■□□□ 1.94
RHBDF1-207ENST00000472390 CPSF1Q10570 1443 aaKnown RBP27.18■■□□□ 1.94
RHBDF1-207ENST00000472390 BRD4O60885 1362 aaPredicted RBP27.18■■□□□ 1.94
RHBDF1-207ENST00000472390 TTC21BQ7Z4L5 1316 aa27.17■■□□□ 1.94
RHBDF1-207ENST00000472390 PTF1AQ7RTS3 328 aa27.17■■□□□ 1.94
RHBDF1-207ENST00000472390 MON2Q7Z3U7 1717 aa27.16■■□□□ 1.94
RHBDF1-207ENST00000472390 NFAT5O94916 1531 aa27.16■■□□□ 1.94
RHBDF1-207ENST00000472390 TOM1L2Q6ZVM7 507 aa27.14■■□□□ 1.94
RHBDF1-207ENST00000472390 THRAP3Q9Y2W1 955 aaKnown RBP27.14■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms