RNA–Protein interactions for RNA: ENST00000472147.1

ITGB1-209, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-209ENST00000472147 NOS1P29475 1434 aa9.02□□□□□ -0.97
ITGB1-209ENST00000472147 NKTRP30414 1462 aaKnown RBP9.02□□□□□ -0.97
ITGB1-209ENST00000472147 EIF2AK4Q9P2K8 1649 aaKnown RBP9.02□□□□□ -0.97
ITGB1-209ENST00000472147 PIK3R4Q99570 1358 aa9.01□□□□□ -0.97
ITGB1-209ENST00000472147 MAP3K1Q13233 1512 aa9.01□□□□□ -0.97
ITGB1-209ENST00000472147 EFCAB6Q5THR3 1501 aa9.01□□□□□ -0.97
ITGB1-209ENST00000472147 RNF166Q96A37 237 aaPredicted RBP9.01□□□□□ -0.97
ITGB1-209ENST00000472147 CRISPLD2Q9H0B8 497 aa9.01□□□□□ -0.97
ITGB1-209ENST00000472147 AMOTL2Q9Y2J4 779 aa9.01□□□□□ -0.97
ITGB1-209ENST00000472147 CFAP65Q6ZU64 1925 aaKnown RBP9.01□□□□□ -0.97
ITGB1-209ENST00000472147 LOC105371045A0A1W2PR82 267 aa9□□□□□ -0.97
ITGB1-209ENST00000472147 NUTM2BA6NNL0 878 aaPredicted RBP9□□□□□ -0.97
ITGB1-209ENST00000472147 NUTM2EB1AL46 878 aaPredicted RBP9□□□□□ -0.97
ITGB1-209ENST00000472147 BRINP3Q76B58 766 aa9□□□□□ -0.97
ITGB1-209ENST00000472147 NUTM2AQ8IVF1 878 aaPredicted RBP9□□□□□ -0.97
ITGB1-209ENST00000472147 NGLY1Q96IV0 654 aa9□□□□□ -0.97
ITGB1-209ENST00000472147 LMTK2Q8IWU2 1503 aa9□□□□□ -0.97
ITGB1-209ENST00000472147 VPS8Q8N3P4 1428 aa8.99□□□□□ -0.97
ITGB1-209ENST00000472147 G3V3G9 751 aa8.99□□□□□ -0.97
ITGB1-209ENST00000472147 PDE4AP27815 886 aa8.99□□□□□ -0.97
ITGB1-209ENST00000472147 CCDC125Q86Z20 511 aa8.99□□□□□ -0.97
ITGB1-209ENST00000472147 MROH1Q8NDA8 1641 aa8.98□□□□□ -0.97
ITGB1-209ENST00000472147 ROBO1Q9Y6N7 1651 aa8.98□□□□□ -0.97
ITGB1-209ENST00000472147 AFF2P51816 1311 aa8.98□□□□□ -0.97
ITGB1-209ENST00000472147 KDM5AP29375 1690 aaKnown RBP8.97□□□□□ -0.97
ITGB1-209ENST00000472147 RIMS2Q9UQ26 1411 aa8.97□□□□□ -0.97
ITGB1-209ENST00000472147 CDK12Q9NYV4 1490 aaPredicted RBP8.97□□□□□ -0.97
ITGB1-209ENST00000472147 XIRP1Q702N8 1843 aaKnown RBP8.97□□□□□ -0.97
ITGB1-209ENST00000472147 MFSD10Q14728 455 aa8.97□□□□□ -0.97
ITGB1-209ENST00000472147 TMEM92Q6UXU6 159 aa8.97□□□□□ -0.97
ITGB1-209ENST00000472147 GPHNQ9NQX3 736 aaPredicted RBP8.97□□□□□ -0.97
ITGB1-209ENST00000472147 ZFYVE9O95405 1425 aa8.97□□□□□ -0.97
ITGB1-209ENST00000472147 RPRD2Q5VT52 1461 aaKnown RBP8.96□□□□□ -0.97
ITGB1-209ENST00000472147 KIF3CO14782 793 aa8.96□□□□□ -0.98
ITGB1-209ENST00000472147 LARP6Q9BRS8 491 aaKnown RBP8.96□□□□□ -0.98
ITGB1-209ENST00000472147 DAPK1P53355 1430 aa8.96□□□□□ -0.98
ITGB1-209ENST00000472147 PIK3C2BO00750 1634 aa8.95□□□□□ -0.98
ITGB1-209ENST00000472147 NUTM2DQ5VT03 806 aaPredicted RBP8.95□□□□□ -0.98
ITGB1-209ENST00000472147 C8orf37Q96NL8 207 aa8.95□□□□□ -0.98
ITGB1-209ENST00000472147 FNBP4Q8N3X1 1017 aaPredicted RBP8.94□□□□□ -0.98
ITGB1-209ENST00000472147 SETD5Q9C0A6 1442 aa8.94□□□□□ -0.98
ITGB1-209ENST00000472147 C2orf72A6NCS6 295 aa8.93□□□□□ -0.98
ITGB1-209ENST00000472147 TRPC5Q9UL62 973 aaPredicted RBP8.93□□□□□ -0.98
ITGB1-209ENST00000472147 ADAMTS13Q76LX8 1427 aa8.93□□□□□ -0.98
ITGB1-209ENST00000472147 ANKRD50Q9ULJ7 1429 aa8.93□□□□□ -0.98
ITGB1-209ENST00000472147 PHLPP1O60346 1717 aa8.92□□□□□ -0.98
ITGB1-209ENST00000472147 LRP6O75581 1613 aa8.92□□□□□ -0.98
ITGB1-209ENST00000472147 NWD1Q149M9 1564 aa8.92□□□□□ -0.98
ITGB1-209ENST00000472147 FAM50AQ14320 339 aaKnown RBP8.92□□□□□ -0.98
ITGB1-209ENST00000472147 WDR70Q9NW82 654 aa8.92□□□□□ -0.98
ITGB1-209ENST00000472147 USP21Q9UK80 565 aa8.92□□□□□ -0.98
ITGB1-209ENST00000472147 CEP152O94986 1710 aa8.91□□□□□ -0.98
ITGB1-209ENST00000472147 DCCP43146 1447 aa8.91□□□□□ -0.98
ITGB1-209ENST00000472147 ADAMTS2O95450 1211 aa8.91□□□□□ -0.98
ITGB1-209ENST00000472147 TMC2Q8TDI7 906 aa8.91□□□□□ -0.98
ITGB1-209ENST00000472147 DDX27Q96GQ7 796 aaKnown RBP8.91□□□□□ -0.98
ITGB1-209ENST00000472147 ADGRB3O60242 1522 aa8.9□□□□□ -0.98
ITGB1-209ENST00000472147 ATAD2Q6PL18 1390 aa8.9□□□□□ -0.98
ITGB1-209ENST00000472147 CHD2O14647 1828 aaKnown RBP8.9□□□□□ -0.98
ITGB1-209ENST00000472147 FOXK1P85037 733 aa8.9□□□□□ -0.98
ITGB1-209ENST00000472147 DSG2Q14126 1118 aa8.9□□□□□ -0.98
ITGB1-209ENST00000472147 COL16A1Q07092 1604 aaPredicted RBP8.9□□□□□ -0.99
ITGB1-209ENST00000472147 AHDC1Q5TGY3 1603 aaPredicted RBP8.9□□□□□ -0.99
ITGB1-209ENST00000472147 SOS2Q07890 1332 aaPredicted RBP8.89□□□□□ -0.99
ITGB1-209ENST00000472147 ZNF326Q5BKZ1 582 aaKnown RBP8.89□□□□□ -0.99
ITGB1-209ENST00000472147 PPP1R15BQ5SWA1 713 aa8.89□□□□□ -0.99
ITGB1-209ENST00000472147 DDX17Q92841 729 aaKnown RBP8.88□□□□□ -0.99
ITGB1-209ENST00000472147 ADGRL2O95490 1459 aa8.88□□□□□ -0.99
ITGB1-209ENST00000472147 PTPRUQ92729 1446 aa8.88□□□□□ -0.99
ITGB1-209ENST00000472147 NUP155O75694 1391 aa8.87□□□□□ -0.99
ITGB1-209ENST00000472147 ERBB3P21860 1342 aa8.87□□□□□ -0.99
ITGB1-209ENST00000472147 EP400Q96L91 3159 aa8.87□□□□□ -0.99
ITGB1-209ENST00000472147 CAMK2BQ13554 666 aa8.87□□□□□ -0.99
ITGB1-209ENST00000472147 E2F4Q16254 413 aa8.87□□□□□ -0.99
ITGB1-209ENST00000472147 PTPN23Q9H3S7 1636 aa8.87□□□□□ -0.99
ITGB1-209ENST00000472147 PNPLA6Q8IY17 1366 aa8.86□□□□□ -0.99
ITGB1-209ENST00000472147 HOXB1P14653 301 aaPredicted RBP8.86□□□□□ -0.99
ITGB1-209ENST00000472147 PLPP6Q8IY26 295 aa8.86□□□□□ -0.99
ITGB1-209ENST00000472147 GJD4Q96KN9 370 aaPredicted RBP8.86□□□□□ -0.99
ITGB1-209ENST00000472147 ORAI2Q96SN7 254 aa8.86□□□□□ -0.99
ITGB1-209ENST00000472147 MST1RQ04912 1400 aa8.86□□□□□ -0.99
ITGB1-209ENST00000472147 METP08581 1390 aa8.86□□□□□ -0.99
ITGB1-209ENST00000472147 TMEM131LA2VDJ0 1609 aa8.85□□□□□ -0.99
ITGB1-209ENST00000472147 HOXB3P14651 431 aaPredicted RBP8.85□□□□□ -0.99
ITGB1-209ENST00000472147 KCNV2Q8TDN2 545 aa8.85□□□□□ -0.99
ITGB1-209ENST00000472147 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.85□□□□□ -0.99
ITGB1-209ENST00000472147 ROCK1Q13464 1354 aa8.85□□□□□ -0.99
ITGB1-209ENST00000472147 SHPRHQ149N8 1683 aa8.85□□□□□ -0.99
ITGB1-209ENST00000472147 RGS12O14924 1447 aa8.84□□□□□ -0.99
ITGB1-209ENST00000472147 DIP2AQ14689 1571 aa8.84□□□□□ -0.99
ITGB1-209ENST00000472147 TRPM2O94759 1503 aa8.84□□□□□ -0.99
ITGB1-209ENST00000472147 RPGRIP1LQ68CZ1 1315 aa8.83□□□□□ -1
ITGB1-209ENST00000472147 PTCH1Q13635 1447 aa8.83□□□□□ -1
ITGB1-209ENST00000472147 ONECUT3O60422 494 aaPredicted RBP8.83□□□□□ -1
ITGB1-209ENST00000472147 ESCO1Q5FWF5 840 aa8.83□□□□□ -1
ITGB1-209ENST00000472147 ASXL1Q8IXJ9 1541 aa8.83□□□□□ -1
ITGB1-209ENST00000472147 SETD1AO15047 1707 aaKnown RBP8.83□□□□□ -1
ITGB1-209ENST00000472147 NPHP3Q7Z494 1330 aa8.82□□□□□ -1
ITGB1-209ENST00000472147 UNC5CLQ8IV45 518 aa8.82□□□□□ -1
ITGB1-209ENST00000472147 ZNF710Q8N1W2 664 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms