RNA–Protein interactions for RNA: ENST00000471887.1

HDAC9-221, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-221ENST00000471887 ZNF598Q86UK7 904 aaKnown RBP10.94□□□□□ -0.66
HDAC9-221ENST00000471887 BAP1Q92560 729 aa10.94□□□□□ -0.66
HDAC9-221ENST00000471887 FKBPLQ9UIM3 349 aa10.94□□□□□ -0.66
HDAC9-221ENST00000471887 WNT7BP56706 349 aa10.93□□□□□ -0.66
HDAC9-221ENST00000471887 ZNF697Q5TEC3 545 aa10.93□□□□□ -0.66
HDAC9-221ENST00000471887 GTF3C3Q9Y5Q9 886 aa10.93□□□□□ -0.66
HDAC9-221ENST00000471887 ZC3H4Q9UPT8 1303 aaKnown RBP10.92□□□□□ -0.66
HDAC9-221ENST00000471887 LINC01559Q495D7 138 aa10.92□□□□□ -0.66
HDAC9-221ENST00000471887 ZNF511Q8NB15 262 aa10.92□□□□□ -0.66
HDAC9-221ENST00000471887 GPKOWQ92917 476 aaPredicted RBP eCLIP10.92□□□□□ -0.66
HDAC9-221ENST00000471887 PRM3Q9NNZ6 103 aa10.92□□□□□ -0.66
HDAC9-221ENST00000471887 SH3BP2P78314 561 aa10.91□□□□□ -0.66
HDAC9-221ENST00000471887 NDUFB9Q9Y6M9 179 aa10.91□□□□□ -0.66
HDAC9-221ENST00000471887 SKOR1P84550 965 aa10.89□□□□□ -0.67
HDAC9-221ENST00000471887 PDXDC2PQ6P474 469 aa10.88□□□□□ -0.67
HDAC9-221ENST00000471887 AGERQ15109 404 aa10.87□□□□□ -0.67
HDAC9-221ENST00000471887 BPHLQ86WA6 291 aaPredicted RBP10.87□□□□□ -0.67
HDAC9-221ENST00000471887 WNT7AO00755 349 aa10.86□□□□□ -0.67
HDAC9-221ENST00000471887 RC3H1Q5TC82 1133 aaKnown RBP10.86□□□□□ -0.67
HDAC9-221ENST00000471887 UBTFP17480 764 aaKnown RBP10.85□□□□□ -0.67
HDAC9-221ENST00000471887 SH3BP5LQ7L8J4 393 aa10.85□□□□□ -0.67
HDAC9-221ENST00000471887 EHBP1Q8NDI1 1231 aa10.85□□□□□ -0.67
HDAC9-221ENST00000471887 FOXJ1Q92949 421 aa10.85□□□□□ -0.67
HDAC9-221ENST00000471887 TBC1D2BQ9UPU7 963 aa10.85□□□□□ -0.67
HDAC9-221ENST00000471887 GPSM3Q9Y4H4 160 aa10.85□□□□□ -0.67
HDAC9-221ENST00000471887 PTK2Q05397 1052 aa10.84□□□□□ -0.67
HDAC9-221ENST00000471887 FOXC1Q12948 553 aa10.84□□□□□ -0.67
HDAC9-221ENST00000471887 GDPD2Q9HCC8 539 aa10.84□□□□□ -0.67
HDAC9-221ENST00000471887 RAD21O60216 631 aa10.83□□□□□ -0.68
HDAC9-221ENST00000471887 SH3RF1Q7Z6J0 888 aa10.83□□□□□ -0.68
HDAC9-221ENST00000471887 ARHGAP9Q9BRR9 750 aa10.83□□□□□ -0.68
HDAC9-221ENST00000471887 GDF9O60383 454 aa10.82□□□□□ -0.68
HDAC9-221ENST00000471887 VARSP26640 1264 aaKnown RBP10.82□□□□□ -0.68
HDAC9-221ENST00000471887 MRGPRX2Q96LB1 330 aa10.82□□□□□ -0.68
HDAC9-221ENST00000471887 PKD2L1Q9P0L9 805 aa10.82□□□□□ -0.68
HDAC9-221ENST00000471887 COG6Q9Y2V7 657 aa10.82□□□□□ -0.68
HDAC9-221ENST00000471887 MAGEB6P1A0A0J9YX57 407 aa10.81□□□□□ -0.68
HDAC9-221ENST00000471887 TNFRSF10AO00220 468 aa10.81□□□□□ -0.68
HDAC9-221ENST00000471887 GPR37L1O60883 481 aa10.81□□□□□ -0.68
HDAC9-221ENST00000471887 PRR20EP86478 221 aa10.81□□□□□ -0.68
HDAC9-221ENST00000471887 PRR20CP86479 221 aa10.81□□□□□ -0.68
HDAC9-221ENST00000471887 PRR20DP86480 221 aa10.81□□□□□ -0.68
HDAC9-221ENST00000471887 PRR20BP86481 221 aa10.81□□□□□ -0.68
HDAC9-221ENST00000471887 PRR20AP86496 221 aa10.81□□□□□ -0.68
HDAC9-221ENST00000471887 ABL2P42684 1182 aa10.8□□□□□ -0.68
HDAC9-221ENST00000471887 C4orf48Q5BLP8 95 aa10.8□□□□□ -0.68
HDAC9-221ENST00000471887 TRIM67Q6ZTA4 783 aa10.8□□□□□ -0.68
HDAC9-221ENST00000471887 ZBTB33Q86T24 672 aa10.8□□□□□ -0.68
HDAC9-221ENST00000471887 FAM174AQ8TBP5 190 aa10.8□□□□□ -0.68
HDAC9-221ENST00000471887 PDZRN3Q9UPQ7 1066 aa10.8□□□□□ -0.68
HDAC9-221ENST00000471887 ZBBXA8MT70 800 aa10.79□□□□□ -0.68
HDAC9-221ENST00000471887 POM121Q96HA1 1249 aa10.79□□□□□ -0.68
HDAC9-221ENST00000471887 CARD14Q9BXL6 1004 aa10.79□□□□□ -0.68
HDAC9-221ENST00000471887 CYP4X1Q8N118 509 aa10.78□□□□□ -0.68
HDAC9-221ENST00000471887 FBXO45P0C2W1 286 aa10.77□□□□□ -0.69
HDAC9-221ENST00000471887 WWC1Q8IX03 1113 aa10.77□□□□□ -0.69
HDAC9-221ENST00000471887 ADAM32Q8TC27 787 aa10.77□□□□□ -0.69
HDAC9-221ENST00000471887 OCSTAMPQ9BR26 566 aa10.77□□□□□ -0.69
HDAC9-221ENST00000471887 C1QTNF2Q9BXJ5 285 aa10.77□□□□□ -0.69
HDAC9-221ENST00000471887 SIAH2O43255 324 aa10.76□□□□□ -0.69
HDAC9-221ENST00000471887 NR1H3Q13133 447 aa10.76□□□□□ -0.69
HDAC9-221ENST00000471887 SNIP1Q8TAD8 396 aaKnown RBP10.76□□□□□ -0.69
HDAC9-221ENST00000471887 TTC24A2A3L6 582 aaPredicted RBP10.75□□□□□ -0.69
HDAC9-221ENST00000471887 GFRA3O60609 400 aa10.75□□□□□ -0.69
HDAC9-221ENST00000471887 IRF5Q13568 498 aa10.75□□□□□ -0.69
HDAC9-221ENST00000471887 ERFEQ4G0M1 354 aa10.75□□□□□ -0.69
HDAC9-221ENST00000471887 IRX2Q9BZI1 471 aaPredicted RBP10.75□□□□□ -0.69
HDAC9-221ENST00000471887 ZNF330Q9Y3S2 320 aaPredicted RBP10.75□□□□□ -0.69
HDAC9-221ENST00000471887 WASHC4Q2M389 1173 aa10.74□□□□□ -0.69
HDAC9-221ENST00000471887 TRMT44Q8IYL2 757 aaKnown RBP10.74□□□□□ -0.69
HDAC9-221ENST00000471887 MPNDQ8N594 471 aa10.74□□□□□ -0.69
HDAC9-221ENST00000471887 CLUAP1Q96AJ1 413 aa10.74□□□□□ -0.69
HDAC9-221ENST00000471887 SLC10A4Q96EP9 437 aa10.74□□□□□ -0.69
HDAC9-221ENST00000471887 TOR4AQ9NXH8 423 aa10.74□□□□□ -0.69
HDAC9-221ENST00000471887 LAPTM4AQ15012 233 aa10.73□□□□□ -0.69
HDAC9-221ENST00000471887 TLL2Q9Y6L7 1015 aa10.73□□□□□ -0.69
HDAC9-221ENST00000471887 ARID5BQ14865 1188 aa10.72□□□□□ -0.69
HDAC9-221ENST00000471887 CDK15Q96Q40 435 aa10.72□□□□□ -0.69
HDAC9-221ENST00000471887 NRG2O14511 850 aaPredicted RBP10.71□□□□□ -0.69
HDAC9-221ENST00000471887 ALDH1A1P00352 501 aa10.71□□□□□ -0.69
HDAC9-221ENST00000471887 VAC14Q08AM6 782 aa10.71□□□□□ -0.69
HDAC9-221ENST00000471887 DZIP3Q86Y13 1208 aaKnown RBP10.71□□□□□ -0.69
HDAC9-221ENST00000471887 ZNF592Q92610 1267 aa10.71□□□□□ -0.69
HDAC9-221ENST00000471887 CDV3Q9UKY7 258 aaKnown RBP10.71□□□□□ -0.69
HDAC9-221ENST00000471887 MAP4K5Q9Y4K4 846 aa10.71□□□□□ -0.69
HDAC9-221ENST00000471887 A6NJR5 290 aa10.7□□□□□ -0.7
HDAC9-221ENST00000471887 PROSER2Q86WR7 435 aaPredicted RBP10.7□□□□□ -0.7
HDAC9-221ENST00000471887 MCCD1P59942 119 aaPredicted RBP10.69□□□□□ -0.7
HDAC9-221ENST00000471887 EIF4G2P78344 907 aaKnown RBP eCLIP10.69□□□□□ -0.7
HDAC9-221ENST00000471887 VASH1Q7L8A9 365 aaPredicted RBP10.69□□□□□ -0.7
HDAC9-221ENST00000471887 PCDHB9Q9Y5E1 797 aa10.69□□□□□ -0.7
HDAC9-221ENST00000471887 WASF2Q9Y6W5 498 aa10.69□□□□□ -0.7
HDAC9-221ENST00000471887 J3QL48 77 aa10.68□□□□□ -0.7
HDAC9-221ENST00000471887 ADH1CP00326 375 aa10.68□□□□□ -0.7
HDAC9-221ENST00000471887 NBPF20Q3BBV1 942 aa10.68□□□□□ -0.7
HDAC9-221ENST00000471887 FAM187AA6NFU0 413 aa10.66□□□□□ -0.7
HDAC9-221ENST00000471887 SMPD1P17405 629 aa10.66□□□□□ -0.7
HDAC9-221ENST00000471887 FSHRP23945 695 aa10.65□□□□□ -0.7
HDAC9-221ENST00000471887 GRM5P41594 1212 aa10.65□□□□□ -0.7
HDAC9-221ENST00000471887 NR5A1Q13285 461 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms