RNA–Protein interactions for RNA: ENST00000471862.1

COL4A3-205, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 5

Gene COL4A3, Length 755 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-205ENST00000471862 RALGAPBQ86X10 1494 aa16.58■□□□□ 0.24
COL4A3-205ENST00000471862 NRAPQ86VF7 1730 aa16.58■□□□□ 0.24
COL4A3-205ENST00000471862 TRIM26Q12899 539 aaPredicted RBP16.57■□□□□ 0.24
COL4A3-205ENST00000471862 COL14A1Q05707 1796 aaKnown RBP16.56■□□□□ 0.24
COL4A3-205ENST00000471862 PHRF1Q9P1Y6 1649 aaKnown RBP16.56■□□□□ 0.24
COL4A3-205ENST00000471862 ACEP12821 1306 aa16.56■□□□□ 0.24
COL4A3-205ENST00000471862 NBPF8Q3BBV2 869 aa16.56■□□□□ 0.24
COL4A3-205ENST00000471862 ROCK2O75116 1388 aaKnown RBP16.55■□□□□ 0.24
COL4A3-205ENST00000471862 FAM83GA6ND36 823 aa16.55■□□□□ 0.24
COL4A3-205ENST00000471862 PLEKHG5O94827 1062 aa16.55■□□□□ 0.24
COL4A3-205ENST00000471862 VPS72Q15906 364 aa16.54■□□□□ 0.24
COL4A3-205ENST00000471862 PPIP5K1Q6PFW1 1433 aa16.53■□□□□ 0.24
COL4A3-205ENST00000471862 ATAD2Q6PL18 1390 aa16.53■□□□□ 0.24
COL4A3-205ENST00000471862 PAK3O75914 559 aaPredicted RBP16.53■□□□□ 0.24
COL4A3-205ENST00000471862 CABP2Q9NPB3 220 aa16.53■□□□□ 0.24
COL4A3-205ENST00000471862 BRWD3Q6RI45 1802 aa16.52■□□□□ 0.24
COL4A3-205ENST00000471862 SRPK2P78362 688 aaKnown RBP16.52■□□□□ 0.24
COL4A3-205ENST00000471862 EP400Q96L91 3159 aa16.5■□□□□ 0.23
COL4A3-205ENST00000471862 NRKQ7Z2Y5 1582 aa16.5■□□□□ 0.23
COL4A3-205ENST00000471862 BRD4O60885 1362 aaPredicted RBP16.5■□□□□ 0.23
COL4A3-205ENST00000471862 EVC2Q86UK5 1308 aa16.49■□□□□ 0.23
COL4A3-205ENST00000471862 ONECUT3O60422 494 aaPredicted RBP16.49■□□□□ 0.23
COL4A3-205ENST00000471862 TONSLQ96HA7 1378 aa16.49■□□□□ 0.23
COL4A3-205ENST00000471862 SBNO2Q9Y2G9 1366 aa16.49■□□□□ 0.23
COL4A3-205ENST00000471862 USP19O94966 1318 aa16.48■□□□□ 0.23
COL4A3-205ENST00000471862 USP6P35125 1406 aa16.48■□□□□ 0.23
COL4A3-205ENST00000471862 BTG4Q9NY30 223 aa16.48■□□□□ 0.23
COL4A3-205ENST00000471862 KIAA0232Q92628 1395 aa16.48■□□□□ 0.23
COL4A3-205ENST00000471862 SSH2Q76I76 1423 aa16.47■□□□□ 0.23
COL4A3-205ENST00000471862 AKAP12Q02952 1782 aa16.47■□□□□ 0.23
COL4A3-205ENST00000471862 CABP1Q9NZU7 370 aa16.47■□□□□ 0.23
COL4A3-205ENST00000471862 NUTM2GQ5VZR2 741 aa16.46■□□□□ 0.23
COL4A3-205ENST00000471862 PRDM11Q9NQV5 511 aa16.46■□□□□ 0.23
COL4A3-205ENST00000471862 SEPT12Q8IYM1 358 aa16.45■□□□□ 0.22
COL4A3-205ENST00000471862 ABTB2Q8N961 1025 aa16.45■□□□□ 0.22
COL4A3-205ENST00000471862 LMO7Q8WWI1 1683 aa16.45■□□□□ 0.22
COL4A3-205ENST00000471862 PIK3C2AO00443 1686 aa16.44■□□□□ 0.22
COL4A3-205ENST00000471862 CPDO75976 1380 aa16.44■□□□□ 0.22
COL4A3-205ENST00000471862 CARD11Q9BXL7 1154 aa16.44■□□□□ 0.22
COL4A3-205ENST00000471862 CCDC9Q9Y3X0 531 aaKnown RBP16.44■□□□□ 0.22
COL4A3-205ENST00000471862 SPATA31A5Q5VU36 1347 aa16.44■□□□□ 0.22
COL4A3-205ENST00000471862 SPATA31A7Q8IWB4 1347 aa16.44■□□□□ 0.22
COL4A3-205ENST00000471862 SLIT3O75094 1523 aa16.43■□□□□ 0.22
COL4A3-205ENST00000471862 THSD7AQ9UPZ6 1657 aa16.43■□□□□ 0.22
COL4A3-205ENST00000471862 ZC3H6P61129 1189 aaKnown RBP16.42■□□□□ 0.22
COL4A3-205ENST00000471862 CHRNA2Q15822 529 aa16.42■□□□□ 0.22
COL4A3-205ENST00000471862 NLRP13Q86W25 1043 aa16.42■□□□□ 0.22
COL4A3-205ENST00000471862 CPSF1Q10570 1443 aaKnown RBP16.42■□□□□ 0.22
COL4A3-205ENST00000471862 CAMTA1Q9Y6Y1 1673 aa16.41■□□□□ 0.22
COL4A3-205ENST00000471862 MON2Q7Z3U7 1717 aa16.41■□□□□ 0.22
COL4A3-205ENST00000471862 GCP02774 474 aa16.4■□□□□ 0.22
COL4A3-205ENST00000471862 FAM98CQ17RN3 349 aaKnown RBP16.4■□□□□ 0.22
COL4A3-205ENST00000471862 CCDC125Q86Z20 511 aa16.4■□□□□ 0.22
COL4A3-205ENST00000471862 ZNF692Q9BU19 519 aaPredicted RBP16.39■□□□□ 0.21
COL4A3-205ENST00000471862 SPATA31A1Q5TZJ5 1347 aa16.39■□□□□ 0.21
COL4A3-205ENST00000471862 BLMP54132 1417 aaPredicted RBP16.38■□□□□ 0.21
COL4A3-205ENST00000471862 KRT27Q7Z3Y8 459 aa16.38■□□□□ 0.21
COL4A3-205ENST00000471862 TTC21BQ7Z4L5 1316 aa16.38■□□□□ 0.21
COL4A3-205ENST00000471862 CD163L1Q9NR16 1453 aa16.37■□□□□ 0.21
COL4A3-205ENST00000471862 COL18A1P39060 1754 aa16.37■□□□□ 0.21
COL4A3-205ENST00000471862 NLRP6P59044 892 aa16.37■□□□□ 0.21
COL4A3-205ENST00000471862 STRN4Q9NRL3 753 aa16.36■□□□□ 0.21
COL4A3-205ENST00000471862 TTC21AQ8NDW8 1320 aa16.36■□□□□ 0.21
COL4A3-205ENST00000471862 USP54Q70EL1 1684 aa16.36■□□□□ 0.21
COL4A3-205ENST00000471862 COL5A2P05997 1499 aaPredicted RBP16.35■□□□□ 0.21
COL4A3-205ENST00000471862 PUS7Q96PZ0 661 aaKnown RBP16.34■□□□□ 0.21
COL4A3-205ENST00000471862 TESK2Q96S53 571 aa16.34■□□□□ 0.21
COL4A3-205ENST00000471862 AATKQ6ZMQ8 1374 aa16.34■□□□□ 0.21
COL4A3-205ENST00000471862 KTN1Q86UP2 1357 aaKnown RBP16.34■□□□□ 0.21
COL4A3-205ENST00000471862 A0A0G2JS52 829 aa16.33■□□□□ 0.2
COL4A3-205ENST00000471862 MYT1Q01538 1121 aa16.33■□□□□ 0.2
COL4A3-205ENST00000471862 NFAT5O94916 1531 aa16.33■□□□□ 0.2
COL4A3-205ENST00000471862 LARP1Q6PKG0 1096 aaKnown RBP16.32■□□□□ 0.2
COL4A3-205ENST00000471862 BARGINQ6ZT62 677 aa16.32■□□□□ 0.2
COL4A3-205ENST00000471862 USP31Q70CQ4 1352 aa16.31■□□□□ 0.2
COL4A3-205ENST00000471862 ST20-MTHFSA0A0A6YYL1 179 aa16.31■□□□□ 0.2
COL4A3-205ENST00000471862 EVA1CP58658 441 aa16.31■□□□□ 0.2
COL4A3-205ENST00000471862 RGPD1P0DJD0 1748 aa16.31■□□□□ 0.2
COL4A3-205ENST00000471862 CLSPNQ9HAW4 1339 aa16.3■□□□□ 0.2
COL4A3-205ENST00000471862 ARHGEF25Q86VW2 580 aa16.3■□□□□ 0.2
COL4A3-205ENST00000471862 SLC12A5Q9H2X9 1139 aa16.3■□□□□ 0.2
COL4A3-205ENST00000471862 RGPD5Q99666 1765 aa16.3■□□□□ 0.2
COL4A3-205ENST00000471862 PARP4Q9UKK3 1724 aaKnown RBP16.3■□□□□ 0.2
COL4A3-205ENST00000471862 CRB1P82279 1406 aa16.29■□□□□ 0.2
COL4A3-205ENST00000471862 TNS1Q9HBL0 1735 aaKnown RBP16.29■□□□□ 0.2
COL4A3-205ENST00000471862 DEFB132Q7Z7B7 95 aa16.29■□□□□ 0.2
COL4A3-205ENST00000471862 KCNH5Q8NCM2 988 aa16.29■□□□□ 0.2
COL4A3-205ENST00000471862 THRAP3Q9Y2W1 955 aaKnown RBP16.29■□□□□ 0.2
COL4A3-205ENST00000471862 EDC4Q6P2E9 1401 aaKnown RBP16.28■□□□□ 0.2
COL4A3-205ENST00000471862 A0A1W2PP64 1363 aa16.28■□□□□ 0.2
COL4A3-205ENST00000471862 FAM182BQ5T319 152 aa16.28■□□□□ 0.2
COL4A3-205ENST00000471862 TCP11L2Q8N4U5 519 aa16.28■□□□□ 0.2
COL4A3-205ENST00000471862 USP35Q9P2H5 1018 aa16.28■□□□□ 0.2
COL4A3-205ENST00000471862 ABCC6O95255 1503 aa16.28■□□□□ 0.2
COL4A3-205ENST00000471862 WNK3Q9BYP7 1800 aa16.28■□□□□ 0.2
COL4A3-205ENST00000471862 NINLQ9Y2I6 1382 aa16.27■□□□□ 0.2
COL4A3-205ENST00000471862 SF3B2Q13435 895 aaKnown RBP16.27■□□□□ 0.2
COL4A3-205ENST00000471862 TMC1Q8TDI8 760 aa16.27■□□□□ 0.2
COL4A3-205ENST00000471862 ZRANB1Q9UGI0 708 aa16.27■□□□□ 0.2
COL4A3-205ENST00000471862 TIMELESSQ9UNS1 1208 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms