RNA–Protein interactions for RNA: ENST00000471655.1

VPS8-221, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 434 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-221ENST00000471655 NBPF8Q3BBV2 869 aa21.46■■□□□ 1.03
VPS8-221ENST00000471655 QRICH2Q9H0J4 1663 aa21.45■■□□□ 1.02
VPS8-221ENST00000471655 VPS72Q15906 364 aa21.45■■□□□ 1.02
VPS8-221ENST00000471655 ROCK2O75116 1388 aaKnown RBP21.45■■□□□ 1.02
VPS8-221ENST00000471655 SRPK2P78362 688 aaKnown RBP21.44■■□□□ 1.02
VPS8-221ENST00000471655 ATAD2Q6PL18 1390 aa21.44■■□□□ 1.02
VPS8-221ENST00000471655 RALGAPBQ86X10 1494 aa21.44■■□□□ 1.02
VPS8-221ENST00000471655 PLCH1Q4KWH8 1693 aa21.44■■□□□ 1.02
VPS8-221ENST00000471655 CRYBG1Q9Y4K1 1723 aa21.43■■□□□ 1.02
VPS8-221ENST00000471655 PLEKHG5O94827 1062 aa21.43■■□□□ 1.02
VPS8-221ENST00000471655 GLI3P10071 1580 aa21.43■■□□□ 1.02
VPS8-221ENST00000471655 CABP2Q9NPB3 220 aa21.42■■□□□ 1.02
VPS8-221ENST00000471655 PPIP5K1Q6PFW1 1433 aa21.41■■□□□ 1.02
VPS8-221ENST00000471655 BRD4O60885 1362 aaPredicted RBP21.41■■□□□ 1.02
VPS8-221ENST00000471655 EVC2Q86UK5 1308 aa21.4■■□□□ 1.02
VPS8-221ENST00000471655 ONECUT3O60422 494 aaPredicted RBP21.4■■□□□ 1.02
VPS8-221ENST00000471655 COL14A1Q05707 1796 aaKnown RBP21.4■■□□□ 1.02
VPS8-221ENST00000471655 TONSLQ96HA7 1378 aa21.37■■□□□ 1.01
VPS8-221ENST00000471655 BTG4Q9NY30 223 aa21.37■■□□□ 1.01
VPS8-221ENST00000471655 NRAPQ86VF7 1730 aa21.36■■□□□ 1.01
VPS8-221ENST00000471655 CABP1Q9NZU7 370 aa21.36■■□□□ 1.01
VPS8-221ENST00000471655 ABTB2Q8N961 1025 aa21.35■■□□□ 1.01
VPS8-221ENST00000471655 PRDM11Q9NQV5 511 aa21.35■■□□□ 1.01
VPS8-221ENST00000471655 SBNO2Q9Y2G9 1366 aa21.35■■□□□ 1.01
VPS8-221ENST00000471655 PHRF1Q9P1Y6 1649 aaKnown RBP21.34■■□□□ 1.01
VPS8-221ENST00000471655 CCDC125Q86Z20 511 aa21.34■■□□□ 1.01
VPS8-221ENST00000471655 CCDC9Q9Y3X0 531 aaKnown RBP21.34■■□□□ 1.01
VPS8-221ENST00000471655 SEPT12Q8IYM1 358 aa21.33■■□□□ 1.01
VPS8-221ENST00000471655 USP19O94966 1318 aa21.32■■□□□ 1
VPS8-221ENST00000471655 USP6P35125 1406 aa21.32■■□□□ 1
VPS8-221ENST00000471655 NUTM2GQ5VZR2 741 aa21.32■■□□□ 1
VPS8-221ENST00000471655 NLRP13Q86W25 1043 aa21.32■■□□□ 1
VPS8-221ENST00000471655 CARD11Q9BXL7 1154 aa21.32■■□□□ 1
VPS8-221ENST00000471655 KIAA0232Q92628 1395 aa21.32■■□□□ 1
VPS8-221ENST00000471655 ZNF692Q9BU19 519 aaPredicted RBP21.3■■□□□ 1
VPS8-221ENST00000471655 SPATA31A5Q5VU36 1347 aa21.29■■□□□ 1
VPS8-221ENST00000471655 SPATA31A7Q8IWB4 1347 aa21.29■■□□□ 1
VPS8-221ENST00000471655 SSH2Q76I76 1423 aa21.29■■□□□ 1
VPS8-221ENST00000471655 CPDO75976 1380 aa21.29■■□□□ 1
VPS8-221ENST00000471655 NRKQ7Z2Y5 1582 aa21.28■■□□□ 1
VPS8-221ENST00000471655 BRWD3Q6RI45 1802 aa21.28■■□□□ 1
VPS8-221ENST00000471655 ZC3H6P61129 1189 aaKnown RBP21.28■■□□□ 1
VPS8-221ENST00000471655 GCP02774 474 aa21.27■■□□□ 1
VPS8-221ENST00000471655 CHRNA2Q15822 529 aa21.26■□□□□ 0.99
VPS8-221ENST00000471655 KRT27Q7Z3Y8 459 aa21.26■□□□□ 0.99
VPS8-221ENST00000471655 FAM98CQ17RN3 349 aaKnown RBP21.25■□□□□ 0.99
VPS8-221ENST00000471655 EP400Q96L91 3159 aa21.25■□□□□ 0.99
VPS8-221ENST00000471655 CPSF1Q10570 1443 aaKnown RBP21.24■□□□□ 0.99
VPS8-221ENST00000471655 NLRP6P59044 892 aa21.24■□□□□ 0.99
VPS8-221ENST00000471655 SPATA31A1Q5TZJ5 1347 aa21.24■□□□□ 0.99
VPS8-221ENST00000471655 BLMP54132 1417 aaPredicted RBP21.23■□□□□ 0.99
VPS8-221ENST00000471655 PUS7Q96PZ0 661 aaKnown RBP21.23■□□□□ 0.99
VPS8-221ENST00000471655 AKAP12Q02952 1782 aa21.23■□□□□ 0.99
VPS8-221ENST00000471655 LMO7Q8WWI1 1683 aa21.22■□□□□ 0.99
VPS8-221ENST00000471655 SLIT3O75094 1523 aa21.22■□□□□ 0.99
VPS8-221ENST00000471655 TTC21BQ7Z4L5 1316 aa21.22■□□□□ 0.99
VPS8-221ENST00000471655 TTC21AQ8NDW8 1320 aa21.22■□□□□ 0.99
VPS8-221ENST00000471655 CAMTA1Q9Y6Y1 1673 aa21.21■□□□□ 0.99
VPS8-221ENST00000471655 SLC24A1O60721 1099 aa21.2■□□□□ 0.98
VPS8-221ENST00000471655 EVA1CP58658 441 aa21.2■□□□□ 0.98
VPS8-221ENST00000471655 STRN4Q9NRL3 753 aa21.2■□□□□ 0.98
VPS8-221ENST00000471655 PIK3C2AO00443 1686 aa21.2■□□□□ 0.98
VPS8-221ENST00000471655 THSD7AQ9UPZ6 1657 aa21.2■□□□□ 0.98
VPS8-221ENST00000471655 A0A0G2JS52 829 aa21.19■□□□□ 0.98
VPS8-221ENST00000471655 MYT1Q01538 1121 aa21.19■□□□□ 0.98
VPS8-221ENST00000471655 BARGINQ6ZT62 677 aa21.18■□□□□ 0.98
VPS8-221ENST00000471655 KTN1Q86UP2 1357 aaKnown RBP21.18■□□□□ 0.98
VPS8-221ENST00000471655 TIMELESSQ9UNS1 1208 aa21.17■□□□□ 0.98
VPS8-221ENST00000471655 CLSPNQ9HAW4 1339 aa21.17■□□□□ 0.98
VPS8-221ENST00000471655 AATKQ6ZMQ8 1374 aa21.17■□□□□ 0.98
VPS8-221ENST00000471655 KCNH5Q8NCM2 988 aa21.16■□□□□ 0.98
VPS8-221ENST00000471655 LARP1Q6PKG0 1096 aaKnown RBP21.15■□□□□ 0.98
VPS8-221ENST00000471655 TESK2Q96S53 571 aa21.15■□□□□ 0.98
VPS8-221ENST00000471655 THRAP3Q9Y2W1 955 aaKnown RBP21.15■□□□□ 0.98
VPS8-221ENST00000471655 MON2Q7Z3U7 1717 aa21.15■□□□□ 0.98
VPS8-221ENST00000471655 COL5A2P05997 1499 aaPredicted RBP21.14■□□□□ 0.98
VPS8-221ENST00000471655 CD163L1Q9NR16 1453 aa21.14■□□□□ 0.98
VPS8-221ENST00000471655 ST20-MTHFSA0A0A6YYL1 179 aa21.14■□□□□ 0.97
VPS8-221ENST00000471655 SF3B2Q13435 895 aaKnown RBP21.14■□□□□ 0.97
VPS8-221ENST00000471655 TCP11L2Q8N4U5 519 aa21.13■□□□□ 0.97
VPS8-221ENST00000471655 USP31Q70CQ4 1352 aa21.12■□□□□ 0.97
VPS8-221ENST00000471655 HDGFL2Q7Z4V5 671 aaPredicted RBP21.12■□□□□ 0.97
VPS8-221ENST00000471655 ARHGEF25Q86VW2 580 aa21.12■□□□□ 0.97
VPS8-221ENST00000471655 SLC12A5Q9H2X9 1139 aa21.12■□□□□ 0.97
VPS8-221ENST00000471655 COL18A1P39060 1754 aa21.11■□□□□ 0.97
VPS8-221ENST00000471655 TMC1Q8TDI8 760 aa21.11■□□□□ 0.97
VPS8-221ENST00000471655 TERF2IPQ9NYB0 399 aa21.11■□□□□ 0.97
VPS8-221ENST00000471655 ZRANB1Q9UGI0 708 aa21.11■□□□□ 0.97
VPS8-221ENST00000471655 NINLQ9Y2I6 1382 aa21.1■□□□□ 0.97
VPS8-221ENST00000471655 USP35Q9P2H5 1018 aa21.1■□□□□ 0.97
VPS8-221ENST00000471655 CRB1P82279 1406 aa21.1■□□□□ 0.97
VPS8-221ENST00000471655 EDC4Q6P2E9 1401 aaKnown RBP21.09■□□□□ 0.97
VPS8-221ENST00000471655 USP54Q70EL1 1684 aa21.09■□□□□ 0.97
VPS8-221ENST00000471655 DEFB132Q7Z7B7 95 aa21.08■□□□□ 0.97
VPS8-221ENST00000471655 AXIN2Q9Y2T1 843 aa21.08■□□□□ 0.97
VPS8-221ENST00000471655 ZBTB7CA1YPR0 619 aa21.07■□□□□ 0.96
VPS8-221ENST00000471655 FAM196AQ6ZSG2 479 aa21.07■□□□□ 0.96
VPS8-221ENST00000471655 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.07■□□□□ 0.96
VPS8-221ENST00000471655 NFAT5O94916 1531 aa21.07■□□□□ 0.96
VPS8-221ENST00000471655 BAG6P46379 1132 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms