RNA–Protein interactions for RNA: ENST00000471635.5

RBM39-228, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-228ENST00000471635 ADH1CP00326 375 aa9.75□□□□□ -0.85
RBM39-228ENST00000471635 SH3BP2P78314 561 aa9.75□□□□□ -0.85
RBM39-228ENST00000471635 NNTQ13423 1086 aa9.75□□□□□ -0.85
RBM39-228ENST00000471635 PTCRAQ6ISU1 281 aaPredicted RBP9.75□□□□□ -0.85
RBM39-228ENST00000471635 AK7Q96M32 723 aa9.75□□□□□ -0.85
RBM39-228ENST00000471635 MPNDQ8N594 471 aa9.74□□□□□ -0.85
RBM39-228ENST00000471635 DNMT3AQ9Y6K1 912 aaPredicted RBP9.74□□□□□ -0.85
RBM39-228ENST00000471635 TLL2Q9Y6L7 1015 aa9.74□□□□□ -0.85
RBM39-228ENST00000471635 MAN1A2O60476 641 aa9.73□□□□□ -0.85
RBM39-228ENST00000471635 TIMP2P16035 220 aa9.73□□□□□ -0.85
RBM39-228ENST00000471635 PARP9Q8IXQ6 854 aa9.73□□□□□ -0.85
RBM39-228ENST00000471635 ADAMTS8Q9UP79 889 aa9.73□□□□□ -0.85
RBM39-228ENST00000471635 PPFIA3O75145 1194 aa9.72□□□□□ -0.85
RBM39-228ENST00000471635 SYMPKQ92797 1274 aaKnown RBP9.72□□□□□ -0.85
RBM39-228ENST00000471635 WDR4P57081 412 aaKnown RBP9.71□□□□□ -0.86
RBM39-228ENST00000471635 SPIRE2Q8WWL2 714 aa9.71□□□□□ -0.86
RBM39-228ENST00000471635 SLC24A3Q9HC58 644 aa9.71□□□□□ -0.86
RBM39-228ENST00000471635 GPAT2Q6NUI2 795 aa9.7□□□□□ -0.86
RBM39-228ENST00000471635 RETREG3Q86VR2 466 aa9.7□□□□□ -0.86
RBM39-228ENST00000471635 BCANQ96GW7 911 aa9.7□□□□□ -0.86
RBM39-228ENST00000471635 BEGAINQ9BUH8 593 aa9.7□□□□□ -0.86
RBM39-228ENST00000471635 CCNYL3P0C7X3 344 aa9.69□□□□□ -0.86
RBM39-228ENST00000471635 FDX1P10109 184 aa9.69□□□□□ -0.86
RBM39-228ENST00000471635 VARSP26640 1264 aaKnown RBP9.69□□□□□ -0.86
RBM39-228ENST00000471635 FOXK2Q01167 660 aa9.69□□□□□ -0.86
RBM39-228ENST00000471635 MS4A1P11836 297 aa9.68□□□□□ -0.86
RBM39-228ENST00000471635 NDUFV2P19404 249 aa9.68□□□□□ -0.86
RBM39-228ENST00000471635 MOXD2PA6NHM9 499 aa9.67□□□□□ -0.86
RBM39-228ENST00000471635 PDE4DQ08499 809 aa9.67□□□□□ -0.86
RBM39-228ENST00000471635 XP32Q5T750 250 aa9.67□□□□□ -0.86
RBM39-228ENST00000471635 PCDHGC3Q9UN70 934 aa9.67□□□□□ -0.86
RBM39-228ENST00000471635 C6orf229H3BNL8 230 aa9.66□□□□□ -0.86
RBM39-228ENST00000471635 KLF16Q9BXK1 252 aaPredicted RBP9.66□□□□□ -0.86
RBM39-228ENST00000471635 UNC93B1Q9H1C4 597 aa9.66□□□□□ -0.86
RBM39-228ENST00000471635 KRT76Q01546 638 aa9.65□□□□□ -0.86
RBM39-228ENST00000471635 PTPRNQ16849 979 aa9.64□□□□□ -0.87
RBM39-228ENST00000471635 KANK3Q6NY19 840 aa9.64□□□□□ -0.87
RBM39-228ENST00000471635 ZNF511Q8NB15 262 aa9.64□□□□□ -0.87
RBM39-228ENST00000471635 CNTNAP3BQ96NU0 1288 aa9.64□□□□□ -0.87
RBM39-228ENST00000471635 TBC1D2Q9BYX2 928 aa9.64□□□□□ -0.87
RBM39-228ENST00000471635 CNTNAP3Q9BZ76 1288 aa9.64□□□□□ -0.87
RBM39-228ENST00000471635 LINC01559Q495D7 138 aa9.63□□□□□ -0.87
RBM39-228ENST00000471635 C6orf118Q5T5N4 469 aa9.63□□□□□ -0.87
RBM39-228ENST00000471635 UPP2O95045 317 aa9.62□□□□□ -0.87
RBM39-228ENST00000471635 IRS1P35568 1242 aa9.62□□□□□ -0.87
RBM39-228ENST00000471635 SVOPQ8N4V2 548 aa9.62□□□□□ -0.87
RBM39-228ENST00000471635 BAP1Q92560 729 aa9.62□□□□□ -0.87
RBM39-228ENST00000471635 EVA1BQ9NVM1 165 aa9.61□□□□□ -0.87
RBM39-228ENST00000471635 ZIC2O95409 532 aaPredicted RBP9.6□□□□□ -0.87
RBM39-228ENST00000471635 DIXDC1Q155Q3 683 aa9.6□□□□□ -0.87
RBM39-228ENST00000471635 ZNF385CQ66K41 422 aaPredicted RBP9.6□□□□□ -0.87
RBM39-228ENST00000471635 FAM174AQ8TBP5 190 aa9.6□□□□□ -0.87
RBM39-228ENST00000471635 BMP2P12643 396 aa9.59□□□□□ -0.87
RBM39-228ENST00000471635 MTMR2Q13614 643 aa9.59□□□□□ -0.87
RBM39-228ENST00000471635 RSBN1LQ6PCB5 846 aaPredicted RBP9.59□□□□□ -0.87
RBM39-228ENST00000471635 ZFAND3Q9H8U3 227 aa9.59□□□□□ -0.87
RBM39-228ENST00000471635 KCNH2Q12809 1159 aa9.58□□□□□ -0.88
RBM39-228ENST00000471635 GPR161Q8N6U8 529 aaKnown RBP9.58□□□□□ -0.88
RBM39-228ENST00000471635 CDK15Q96Q40 435 aa9.58□□□□□ -0.88
RBM39-228ENST00000471635 LINC00528Q8N1L1 170 aa9.57□□□□□ -0.88
RBM39-228ENST00000471635 PRR7Q8TB68 274 aa9.57□□□□□ -0.88
RBM39-228ENST00000471635 ITPKCQ96DU7 683 aa9.57□□□□□ -0.88
RBM39-228ENST00000471635 COL25A1Q9BXS0 654 aaPredicted RBP9.57□□□□□ -0.88
RBM39-228ENST00000471635 DNMT3LQ9UJW3 386 aa9.57□□□□□ -0.88
RBM39-228ENST00000471635 PCDHB15Q9Y5E8 787 aa9.57□□□□□ -0.88
RBM39-228ENST00000471635 SOS2Q07890 1332 aaPredicted RBP9.56□□□□□ -0.88
RBM39-228ENST00000471635 NR5A1Q13285 461 aa9.56□□□□□ -0.88
RBM39-228ENST00000471635 CSPP1Q1MSJ5 1256 aa9.56□□□□□ -0.88
RBM39-228ENST00000471635 RIC3Q7Z5B4 369 aa9.56□□□□□ -0.88
RBM39-228ENST00000471635 MEIOBQ8N635 442 aa9.56□□□□□ -0.88
RBM39-228ENST00000471635 SCARF2Q96GP6 870 aaPredicted RBP9.56□□□□□ -0.88
RBM39-228ENST00000471635 SPTLC1O15269 473 aa9.55□□□□□ -0.88
RBM39-228ENST00000471635 MARSP56192 900 aaKnown RBP9.55□□□□□ -0.88
RBM39-228ENST00000471635 NANOS1Q8WY41 292 aaKnown RBP9.55□□□□□ -0.88
RBM39-228ENST00000471635 SPDYE5A6NIY4 337 aa9.54□□□□□ -0.88
RBM39-228ENST00000471635 SLURP2P0DP57 97 aa9.54□□□□□ -0.88
RBM39-228ENST00000471635 GJA5P36382 358 aa9.54□□□□□ -0.88
RBM39-228ENST00000471635 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.54□□□□□ -0.889e-38■■□□□ 12.1
RBM39-228ENST00000471635 ADAM23O75077 832 aa9.53□□□□□ -0.88
RBM39-228ENST00000471635 ARHGEF15O94989 841 aa9.53□□□□□ -0.88
RBM39-228ENST00000471635 MYSM1Q5VVJ2 828 aa9.53□□□□□ -0.88
RBM39-228ENST00000471635 HRCP23327 699 aa9.52□□□□□ -0.89
RBM39-228ENST00000471635 CABLES1Q8TDN4 633 aa9.52□□□□□ -0.89
RBM39-228ENST00000471635 KRTAP4-8Q9BYQ9 185 aa9.52□□□□□ -0.89
RBM39-228ENST00000471635 ZBTB3Q9H5J0 574 aa9.52□□□□□ -0.89
RBM39-228ENST00000471635 LIMD1Q9UGP4 676 aa9.52□□□□□ -0.89
RBM39-228ENST00000471635 NR3C2P08235 984 aa9.51□□□□□ -0.89
RBM39-228ENST00000471635 ARID5BQ14865 1188 aa9.51□□□□□ -0.89
RBM39-228ENST00000471635 RNFT1Q5M7Z0 435 aa9.51□□□□□ -0.89
RBM39-228ENST00000471635 GPBP1L1Q9HC44 474 aaPredicted RBP9.51□□□□□ -0.89
RBM39-228ENST00000471635 CFAP99D6REC4 459 aa9.5□□□□□ -0.89
RBM39-228ENST00000471635 PTSQ03393 145 aa9.5□□□□□ -0.89
RBM39-228ENST00000471635 DESI1Q6ICB0 168 aa9.5□□□□□ -0.89
RBM39-228ENST00000471635 PRPF38BQ5VTL8 546 aaKnown RBP9.49□□□□□ -0.89
RBM39-228ENST00000471635 WHAMMQ8TF30 809 aa9.49□□□□□ -0.89
RBM39-228ENST00000471635 TSEN34Q9BSV6 310 aaKnown RBP9.49□□□□□ -0.89
RBM39-228ENST00000471635 NUTM2BA6NNL0 878 aaPredicted RBP9.48□□□□□ -0.89
RBM39-228ENST00000471635 NUTM2EB1AL46 878 aaPredicted RBP9.48□□□□□ -0.89
RBM39-228ENST00000471635 MSTNO14793 375 aa9.48□□□□□ -0.89
RBM39-228ENST00000471635 QPCTQ16769 361 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms