RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 XPCQ01831 940 aaPredicted RBP13.55□□□□□ -0.24
CPSF4-211ENST00000471455 GJD4Q96KN9 370 aaPredicted RBP13.55□□□□□ -0.24
CPSF4-211ENST00000471455 YTHDC2Q9H6S0 1430 aaKnown RBP13.55□□□□□ -0.24
CPSF4-211ENST00000471455 HAP1P54257 671 aaPredicted RBP13.54□□□□□ -0.24
CPSF4-211ENST00000471455 WAPLQ7Z5K2 1190 aa13.54□□□□□ -0.24
CPSF4-211ENST00000471455 SIRT1Q96EB6 747 aa13.54□□□□□ -0.24
CPSF4-211ENST00000471455 MPHOSPH9Q99550 1183 aa13.54□□□□□ -0.24
CPSF4-211ENST00000471455 NUTM2FA1L443 756 aa13.53□□□□□ -0.24
CPSF4-211ENST00000471455 PSME1Q06323 249 aa13.53□□□□□ -0.24
CPSF4-211ENST00000471455 UNC5CLQ8IV45 518 aa13.53□□□□□ -0.24
CPSF4-211ENST00000471455 SPATA31A3Q5VYP0 1347 aa13.53□□□□□ -0.24
CPSF4-211ENST00000471455 TMEM132EQ6IEE7 984 aa13.52□□□□□ -0.25
CPSF4-211ENST00000471455 ZBTB47Q9UFB7 747 aaPredicted RBP13.52□□□□□ -0.25
CPSF4-211ENST00000471455 DHX57Q6P158 1386 aaKnown RBP13.52□□□□□ -0.25
CPSF4-211ENST00000471455 PLEKHH1Q9ULM0 1364 aa13.52□□□□□ -0.25
CPSF4-211ENST00000471455 TNS3Q68CZ2 1445 aa13.52□□□□□ -0.25
CPSF4-211ENST00000471455 SLIT2O94813 1529 aa13.52□□□□□ -0.25
CPSF4-211ENST00000471455 USP32Q8NFA0 1604 aa13.52□□□□□ -0.25
CPSF4-211ENST00000471455 ARHGEF10O15013 1369 aa13.51□□□□□ -0.25
CPSF4-211ENST00000471455 GABBR2O75899 941 aa13.51□□□□□ -0.25
CPSF4-211ENST00000471455 KRT28Q7Z3Y7 464 aa13.51□□□□□ -0.25
CPSF4-211ENST00000471455 PHF12Q96QT6 1004 aa13.51□□□□□ -0.25
CPSF4-211ENST00000471455 RALGAPBQ86X10 1494 aa13.5□□□□□ -0.25
CPSF4-211ENST00000471455 BLMP54132 1417 aaPredicted RBP13.5□□□□□ -0.25
CPSF4-211ENST00000471455 PHF8Q9UPP1 1060 aa13.5□□□□□ -0.25
CPSF4-211ENST00000471455 SBNO1A3KN83 1393 aa13.49□□□□□ -0.25
CPSF4-211ENST00000471455 SF3B2Q13435 895 aaKnown RBP13.49□□□□□ -0.25
CPSF4-211ENST00000471455 TSPYL2Q9H2G4 693 aaPredicted RBP13.49□□□□□ -0.25
CPSF4-211ENST00000471455 C14orf93Q9H972 538 aaKnown RBP13.49□□□□□ -0.25
CPSF4-211ENST00000471455 CCDC61Q9Y6R9 512 aa13.49□□□□□ -0.25
CPSF4-211ENST00000471455 NRXN1Q9ULB1 1477 aa13.48□□□□□ -0.25
CPSF4-211ENST00000471455 ANKARQ7Z5J8 1434 aa13.48□□□□□ -0.25
CPSF4-211ENST00000471455 EIF3AQ14152 1382 aaKnown RBP13.48□□□□□ -0.25
CPSF4-211ENST00000471455 GLI3P10071 1580 aa13.48□□□□□ -0.25
CPSF4-211ENST00000471455 NWD2Q9ULI1 1742 aa13.47□□□□□ -0.25
CPSF4-211ENST00000471455 DLC1Q96QB1 1528 aa13.47□□□□□ -0.25
CPSF4-211ENST00000471455 VPS72Q15906 364 aa13.46□□□□□ -0.25
CPSF4-211ENST00000471455 POGKQ9P215 609 aa13.46□□□□□ -0.25
CPSF4-211ENST00000471455 PAK3O75914 559 aaPredicted RBP13.45□□□□□ -0.26
CPSF4-211ENST00000471455 LMOD2Q6P5Q4 547 aa13.45□□□□□ -0.26
CPSF4-211ENST00000471455 PRAM1Q96QH2 718 aa13.45□□□□□ -0.26
CPSF4-211ENST00000471455 CCDC9Q9Y3X0 531 aaKnown RBP13.45□□□□□ -0.26
CPSF4-211ENST00000471455 ADGRB2O60241 1585 aa13.45□□□□□ -0.26
CPSF4-211ENST00000471455 PLCH1Q4KWH8 1693 aa13.44□□□□□ -0.26
CPSF4-211ENST00000471455 CFAP70Q5T0N1 1121 aa13.44□□□□□ -0.26
CPSF4-211ENST00000471455 GPRASP1Q5JY77 1395 aa13.44□□□□□ -0.26
CPSF4-211ENST00000471455 SEPT12Q8IYM1 358 aa13.43□□□□□ -0.26
CPSF4-211ENST00000471455 ABCA3Q99758 1704 aa13.43□□□□□ -0.26
CPSF4-211ENST00000471455 RGPD8O14715 1765 aaPredicted RBP13.43□□□□□ -0.26
CPSF4-211ENST00000471455 EP400Q96L91 3159 aa13.42□□□□□ -0.26
CPSF4-211ENST00000471455 SAFB2Q14151 953 aaKnown RBP eCLIP13.42□□□□□ -0.26
CPSF4-211ENST00000471455 KLHL34Q8N239 644 aa13.42□□□□□ -0.26
CPSF4-211ENST00000471455 A0A0G2JS52 829 aa13.41□□□□□ -0.26
CPSF4-211ENST00000471455 MYT1Q01538 1121 aa13.41□□□□□ -0.26
CPSF4-211ENST00000471455 KRT27Q7Z3Y8 459 aa13.41□□□□□ -0.26
CPSF4-211ENST00000471455 CABLES1Q8TDN4 633 aa13.41□□□□□ -0.26
CPSF4-211ENST00000471455 BRWD3Q6RI45 1802 aa13.41□□□□□ -0.26
CPSF4-211ENST00000471455 ONECUT3O60422 494 aaPredicted RBP13.4□□□□□ -0.26
CPSF4-211ENST00000471455 STAC3Q96MF2 364 aa13.4□□□□□ -0.26
CPSF4-211ENST00000471455 TULP4Q9NRJ4 1543 aa13.39□□□□□ -0.27
CPSF4-211ENST00000471455 GALR2O43603 387 aaPredicted RBP13.39□□□□□ -0.27
CPSF4-211ENST00000471455 PMFBP1Q8TBY8 1022 aa13.39□□□□□ -0.27
CPSF4-211ENST00000471455 ADGRB1O14514 1584 aa13.39□□□□□ -0.27
CPSF4-211ENST00000471455 COL14A1Q05707 1796 aaKnown RBP13.38□□□□□ -0.27
CPSF4-211ENST00000471455 BAG6P46379 1132 aa13.38□□□□□ -0.27
CPSF4-211ENST00000471455 TRPM3Q9HCF6 1732 aaPredicted RBP13.37□□□□□ -0.27
CPSF4-211ENST00000471455 DEFB132Q7Z7B7 95 aa13.37□□□□□ -0.27
CPSF4-211ENST00000471455 SRCAPQ6ZRS2 3230 aa13.37□□□□□ -0.27
CPSF4-211ENST00000471455 NRAPQ86VF7 1730 aa13.36□□□□□ -0.27
CPSF4-211ENST00000471455 RAB3GAP2Q9H2M9 1393 aa13.36□□□□□ -0.27
CPSF4-211ENST00000471455 FAM83GA6ND36 823 aa13.36□□□□□ -0.27
CPSF4-211ENST00000471455 NGDNQ8NEJ9 315 aaKnown RBP13.36□□□□□ -0.27
CPSF4-211ENST00000471455 SPOCK2Q92563 424 aa13.36□□□□□ -0.27
CPSF4-211ENST00000471455 FAM212AQ96EL1 285 aa13.36□□□□□ -0.27
CPSF4-211ENST00000471455 KIF12Q96FN5 646 aa13.36□□□□□ -0.27
CPSF4-211ENST00000471455 BTG4Q9NY30 223 aa13.36□□□□□ -0.27
CPSF4-211ENST00000471455 TRAK1Q9UPV9 953 aa13.36□□□□□ -0.27
CPSF4-211ENST00000471455 ALS2Q96Q42 1657 aa13.36□□□□□ -0.27
CPSF4-211ENST00000471455 MINK1Q8N4C8 1332 aaPredicted RBP13.36□□□□□ -0.27
CPSF4-211ENST00000471455 LRP5O75197 1615 aa13.35□□□□□ -0.27
CPSF4-211ENST00000471455 WASLO00401 505 aaPredicted RBP13.35□□□□□ -0.27
CPSF4-211ENST00000471455 MS4A3Q96HJ5 214 aa13.35□□□□□ -0.27
CPSF4-211ENST00000471455 HIRIP3Q9BW71 556 aaPredicted RBP13.35□□□□□ -0.27
CPSF4-211ENST00000471455 ITSN1Q15811 1721 aa13.34□□□□□ -0.27
CPSF4-211ENST00000471455 POTEIP0CG38 1075 aa13.34□□□□□ -0.27
CPSF4-211ENST00000471455 FAM98CQ17RN3 349 aaKnown RBP13.34□□□□□ -0.27
CPSF4-211ENST00000471455 PRDM11Q9NQV5 511 aa13.34□□□□□ -0.27
CPSF4-211ENST00000471455 RGPD1P0DJD0 1748 aa13.33□□□□□ -0.27
CPSF4-211ENST00000471455 DCAF11Q8TEB1 546 aa13.33□□□□□ -0.28
CPSF4-211ENST00000471455 ATP7BP35670 1465 aa13.33□□□□□ -0.28
CPSF4-211ENST00000471455 CLCN6P51797 869 aa13.32□□□□□ -0.28
CPSF4-211ENST00000471455 SPATA31A5Q5VU36 1347 aa13.32□□□□□ -0.28
CPSF4-211ENST00000471455 SPATA31A7Q8IWB4 1347 aa13.32□□□□□ -0.28
CPSF4-211ENST00000471455 PRR36Q9H6K5 1346 aa13.32□□□□□ -0.28
CPSF4-211ENST00000471455 KDM2AQ9Y2K7 1162 aa13.31□□□□□ -0.28
CPSF4-211ENST00000471455 CRYBG1Q9Y4K1 1723 aa13.3□□□□□ -0.28
CPSF4-211ENST00000471455 DISP2A7MBM2 1401 aa13.3□□□□□ -0.28
CPSF4-211ENST00000471455 THSD7AQ9UPZ6 1657 aa13.29□□□□□ -0.28
CPSF4-211ENST00000471455 MAP3K13O43283 966 aa13.29□□□□□ -0.28
CPSF4-211ENST00000471455 ARHGEF28Q8N1W1 1705 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms