RNA–Protein interactions for RNA: ENST00000471414.1

COPS3-206, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-206ENST00000471414 GOPCQ9HD26 462 aa7.72□□□□□ -1.17
COPS3-206ENST00000471414 MAP10Q9P2G4 905 aa7.72□□□□□ -1.17
COPS3-206ENST00000471414 NUTM2BA6NNL0 878 aaPredicted RBP7.71□□□□□ -1.18
COPS3-206ENST00000471414 NUTM2EB1AL46 878 aaPredicted RBP7.71□□□□□ -1.18
COPS3-206ENST00000471414 TPRNQ4KMQ1 711 aa7.71□□□□□ -1.18
COPS3-206ENST00000471414 NUTM2DQ5VT03 806 aaPredicted RBP7.71□□□□□ -1.18
COPS3-206ENST00000471414 NUTM2AQ8IVF1 878 aaPredicted RBP7.71□□□□□ -1.18
COPS3-206ENST00000471414 ZNF511Q8NB15 262 aa7.71□□□□□ -1.18
COPS3-206ENST00000471414 SMCPP49901 116 aaPredicted RBP7.7□□□□□ -1.18
COPS3-206ENST00000471414 BAP1Q92560 729 aa7.7□□□□□ -1.18
COPS3-206ENST00000471414 AAASQ9NRG9 546 aa7.7□□□□□ -1.18
COPS3-206ENST00000471414 J3QL48 77 aa7.69□□□□□ -1.18
COPS3-206ENST00000471414 NEUROD2Q15784 382 aa7.68□□□□□ -1.18
COPS3-206ENST00000471414 MPNDQ8N594 471 aa7.68□□□□□ -1.18
COPS3-206ENST00000471414 HELBQ8NG08 1087 aaPredicted RBP7.68□□□□□ -1.18
COPS3-206ENST00000471414 TTC24A2A3L6 582 aaPredicted RBP7.67□□□□□ -1.18
COPS3-206ENST00000471414 ST8SIA5O15466 376 aa7.67□□□□□ -1.18
COPS3-206ENST00000471414 CTDSPL2Q05D32 466 aa7.67□□□□□ -1.18
COPS3-206ENST00000471414 CTC1Q2NKJ3 1217 aa7.67□□□□□ -1.18
COPS3-206ENST00000471414 LINC01559Q495D7 138 aa7.67□□□□□ -1.18
COPS3-206ENST00000471414 CTHP32929 405 aa7.66□□□□□ -1.18
COPS3-206ENST00000471414 EHBP1Q8NDI1 1231 aa7.66□□□□□ -1.18
COPS3-206ENST00000471414 VARSP26640 1264 aaKnown RBP7.65□□□□□ -1.18
COPS3-206ENST00000471414 C4orf48Q5BLP8 95 aa7.65□□□□□ -1.18
COPS3-206ENST00000471414 SH3RF1Q7Z6J0 888 aa7.65□□□□□ -1.18
COPS3-206ENST00000471414 TSC1Q92574 1164 aa7.64□□□□□ -1.19
COPS3-206ENST00000471414 SH3BP5LQ7L8J4 393 aa7.63□□□□□ -1.19
COPS3-206ENST00000471414 HPS1Q92902 700 aa7.63□□□□□ -1.19
COPS3-206ENST00000471414 FOXJ1Q92949 421 aa7.63□□□□□ -1.19
COPS3-206ENST00000471414 C1QTNF2Q9BXJ5 285 aa7.63□□□□□ -1.19
COPS3-206ENST00000471414 DACH1Q9UI36 760 aa7.63□□□□□ -1.19
COPS3-206ENST00000471414 POTECB2RU33 542 aa7.62□□□□□ -1.19
COPS3-206ENST00000471414 ALDH1A1P00352 501 aa7.62□□□□□ -1.19
COPS3-206ENST00000471414 RFC5P40937 340 aa7.62□□□□□ -1.19
COPS3-206ENST00000471414 ARMC2Q8NEN0 867 aa7.62□□□□□ -1.19
COPS3-206ENST00000471414 IL27Q8NEV9 243 aa7.62□□□□□ -1.19
COPS3-206ENST00000471414 LRRN4Q8WUT4 740 aa7.62□□□□□ -1.19
COPS3-206ENST00000471414 CDK15Q96Q40 435 aa7.62□□□□□ -1.19
COPS3-206ENST00000471414 TLL2Q9Y6L7 1015 aa7.62□□□□□ -1.19
COPS3-206ENST00000471414 GPKOWQ92917 476 aaPredicted RBP eCLIP7.61□□□□□ -1.19
COPS3-206ENST00000471414 AXIN1O15169 862 aa7.6□□□□□ -1.19
COPS3-206ENST00000471414 NBPF14Q5TI25 921 aa7.6□□□□□ -1.19
COPS3-206ENST00000471414 ZNF787Q6DD87 383 aa7.6□□□□□ -1.19
COPS3-206ENST00000471414 BPHLQ86WA6 291 aaPredicted RBP7.59□□□□□ -1.19
COPS3-206ENST00000471414 TRMT44Q8IYL2 757 aaKnown RBP7.59□□□□□ -1.19
COPS3-206ENST00000471414 FAM174AQ8TBP5 190 aa7.59□□□□□ -1.19
COPS3-206ENST00000471414 PCMTD1Q96MG8 357 aaPredicted RBP7.59□□□□□ -1.19
COPS3-206ENST00000471414 HMX1Q9NP08 348 aaPredicted RBP7.59□□□□□ -1.19
COPS3-206ENST00000471414 ZC3H4Q9UPT8 1303 aaKnown RBP7.58□□□□□ -1.2
COPS3-206ENST00000471414 AP1G2O75843 785 aa7.58□□□□□ -1.2
COPS3-206ENST00000471414 USP17L8P0C7I0 530 aa7.58□□□□□ -1.2
COPS3-206ENST00000471414 NR6A1Q15406 480 aa7.58□□□□□ -1.2
COPS3-206ENST00000471414 OCSTAMPQ9BR26 566 aa7.58□□□□□ -1.2
COPS3-206ENST00000471414 KLF16Q9BXK1 252 aaPredicted RBP7.58□□□□□ -1.2
COPS3-206ENST00000471414 FKBPLQ9UIM3 349 aa7.58□□□□□ -1.2
COPS3-206ENST00000471414 ADH1CP00326 375 aa7.57□□□□□ -1.2
COPS3-206ENST00000471414 PDXDC2PQ6P474 469 aa7.57□□□□□ -1.2
COPS3-206ENST00000471414 EPS8L1Q8TE68 723 aa7.57□□□□□ -1.2
COPS3-206ENST00000471414 GRM5P41594 1212 aa7.56□□□□□ -1.2
COPS3-206ENST00000471414 TMEM259Q4ZIN3 620 aa7.56□□□□□ -1.2
COPS3-206ENST00000471414 TRIM34Q9BYJ4 488 aa7.56□□□□□ -1.2
COPS3-206ENST00000471414 ATP13A2Q9NQ11 1180 aa7.56□□□□□ -1.2
COPS3-206ENST00000471414 MAP4K5Q9Y4K4 846 aa7.56□□□□□ -1.2
COPS3-206ENST00000471414 WASF2Q9Y6W5 498 aa7.56□□□□□ -1.2
COPS3-206ENST00000471414 SOCS7O14512 581 aa7.55□□□□□ -1.2
COPS3-206ENST00000471414 PRKCSHP14314 528 aaPredicted RBP7.55□□□□□ -1.2
COPS3-206ENST00000471414 NNTQ13423 1086 aa7.55□□□□□ -1.2
COPS3-206ENST00000471414 GMPR2Q9P2T1 348 aaKnown RBP7.55□□□□□ -1.2
COPS3-206ENST00000471414 GJD4Q96KN9 370 aaPredicted RBP7.54□□□□□ -1.2
COPS3-206ENST00000471414 GPSM3Q9Y4H4 160 aa7.54□□□□□ -1.2
COPS3-206ENST00000471414 NR3C2P08235 984 aa7.53□□□□□ -1.2
COPS3-206ENST00000471414 TIMP2P16035 220 aa7.53□□□□□ -1.2
COPS3-206ENST00000471414 NR5A1Q13285 461 aa7.53□□□□□ -1.2
COPS3-206ENST00000471414 ERFEQ4G0M1 354 aa7.53□□□□□ -1.2
COPS3-206ENST00000471414 AGERQ15109 404 aa7.52□□□□□ -1.21
COPS3-206ENST00000471414 TRIM46Q7Z4K8 759 aa7.52□□□□□ -1.21
COPS3-206ENST00000471414 TRIM47Q96LD4 638 aa7.52□□□□□ -1.21
COPS3-206ENST00000471414 CAPN5O15484 640 aaPredicted RBP7.51□□□□□ -1.21
COPS3-206ENST00000471414 GPR37L1O60883 481 aa7.51□□□□□ -1.21
COPS3-206ENST00000471414 BANK1Q8NDB2 785 aa7.51□□□□□ -1.21
COPS3-206ENST00000471414 ZNF775Q96BV0 537 aaPredicted RBP7.51□□□□□ -1.21
COPS3-206ENST00000471414 MAGEB6P1A0A0J9YX57 407 aa7.5□□□□□ -1.21
COPS3-206ENST00000471414 ARHGAP9Q9BRR9 750 aa7.5□□□□□ -1.21
COPS3-206ENST00000471414 ATP1B4Q9UN42 357 aaPredicted RBP7.5□□□□□ -1.21
COPS3-206ENST00000471414 PTK2Q05397 1052 aa7.49□□□□□ -1.21
COPS3-206ENST00000471414 LCE2AQ5TA79 106 aaPredicted RBP7.49□□□□□ -1.21
COPS3-206ENST00000471414 SENP2Q9HC62 589 aa7.49□□□□□ -1.21
COPS3-206ENST00000471414 BMP1P13497 986 aa7.48□□□□□ -1.21
COPS3-206ENST00000471414 SNRPBP14678 240 aaKnown RBP7.48□□□□□ -1.21
COPS3-206ENST00000471414 FSHRP23945 695 aa7.48□□□□□ -1.21
COPS3-206ENST00000471414 WDR4P57081 412 aaKnown RBP7.48□□□□□ -1.21
COPS3-206ENST00000471414 ARID5BQ14865 1188 aa7.48□□□□□ -1.21
COPS3-206ENST00000471414 MTMR14Q8NCE2 650 aa7.48□□□□□ -1.21
COPS3-206ENST00000471414 KIFC2Q96AC6 838 aa7.48□□□□□ -1.21
COPS3-206ENST00000471414 ITPKCQ96DU7 683 aa7.48□□□□□ -1.21
COPS3-206ENST00000471414 CARD14Q9BXL6 1004 aa7.48□□□□□ -1.21
COPS3-206ENST00000471414 C11orf95C9JLR9 678 aaPredicted RBP7.47□□□□□ -1.21
COPS3-206ENST00000471414 VASH1Q7L8A9 365 aaPredicted RBP7.47□□□□□ -1.21
COPS3-206ENST00000471414 ADAM32Q8TC27 787 aa7.47□□□□□ -1.21
COPS3-206ENST00000471414 CDV3Q9UKY7 258 aaKnown RBP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms