RNA–Protein interactions for RNA: ENST00000471039.1

SCNM1-205, Transcript of sodium channel modifier 1, humanhuman

TSL 2

Gene SCNM1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-205ENST00000471039 SSH2Q76I76 1423 aa17.41■□□□□ 0.38
SCNM1-205ENST00000471039 SLC24A1O60721 1099 aa17.41■□□□□ 0.38
SCNM1-205ENST00000471039 EIF4G2P78344 907 aaKnown RBP eCLIP17.41■□□□□ 0.38
SCNM1-205ENST00000471039 TMF1P82094 1093 aa17.41■□□□□ 0.38
SCNM1-205ENST00000471039 CABP1Q9NZU7 370 aa17.41■□□□□ 0.38
SCNM1-205ENST00000471039 BRD4O60885 1362 aaPredicted RBP17.4■□□□□ 0.38
SCNM1-205ENST00000471039 HSPA5P11021 654 aaKnown RBP17.4■□□□□ 0.38
SCNM1-205ENST00000471039 PUS7Q96PZ0 661 aaKnown RBP17.4■□□□□ 0.38
SCNM1-205ENST00000471039 NRAPQ86VF7 1730 aa17.4■□□□□ 0.38
SCNM1-205ENST00000471039 NUTM2BA6NNL0 878 aaPredicted RBP17.39■□□□□ 0.37
SCNM1-205ENST00000471039 NUTM2EB1AL46 878 aaPredicted RBP17.39■□□□□ 0.37
SCNM1-205ENST00000471039 NUTM2AQ8IVF1 878 aaPredicted RBP17.39■□□□□ 0.37
SCNM1-205ENST00000471039 A0A1W2PP64 1363 aa17.39■□□□□ 0.37
SCNM1-205ENST00000471039 COL14A1Q05707 1796 aaKnown RBP17.38■□□□□ 0.37
SCNM1-205ENST00000471039 SLIT3O75094 1523 aa17.38■□□□□ 0.37
SCNM1-205ENST00000471039 KTN1Q86UP2 1357 aaKnown RBP17.37■□□□□ 0.37
SCNM1-205ENST00000471039 PAK3O75914 559 aaPredicted RBP17.36■□□□□ 0.37
SCNM1-205ENST00000471039 MEX3CQ5U5Q3 659 aaKnown RBP17.36■□□□□ 0.37
SCNM1-205ENST00000471039 LMOD2Q6P5Q4 547 aa17.36■□□□□ 0.37
SCNM1-205ENST00000471039 EDC4Q6P2E9 1401 aaKnown RBP17.36■□□□□ 0.37
SCNM1-205ENST00000471039 PHF23Q9BUL5 403 aaPredicted RBP17.35■□□□□ 0.37
SCNM1-205ENST00000471039 ANKRD26Q9UPS8 1709 aa17.35■□□□□ 0.37
SCNM1-205ENST00000471039 LTN1O94822 1766 aa17.35■□□□□ 0.37
SCNM1-205ENST00000471039 ANKRD36BQ8N2N9 1353 aa17.34■□□□□ 0.37
SCNM1-205ENST00000471039 TMC1Q8TDI8 760 aa17.34■□□□□ 0.37
SCNM1-205ENST00000471039 LMO7Q8WWI1 1683 aa17.33■□□□□ 0.37
SCNM1-205ENST00000471039 CDCA8Q53HL2 280 aa17.33■□□□□ 0.36
SCNM1-205ENST00000471039 SLC12A5Q9H2X9 1139 aa17.33■□□□□ 0.36
SCNM1-205ENST00000471039 USP19O94966 1318 aa17.32■□□□□ 0.36
SCNM1-205ENST00000471039 ADAMTS2O95450 1211 aa17.32■□□□□ 0.36
SCNM1-205ENST00000471039 CABLES1Q8TDN4 633 aa17.32■□□□□ 0.36
SCNM1-205ENST00000471039 NFAT5O94916 1531 aa17.31■□□□□ 0.36
SCNM1-205ENST00000471039 TTC21AQ8NDW8 1320 aa17.31■□□□□ 0.36
SCNM1-205ENST00000471039 HDGFL2Q7Z4V5 671 aaPredicted RBP17.31■□□□□ 0.36
SCNM1-205ENST00000471039 C8orf37Q96NL8 207 aa17.31■□□□□ 0.36
SCNM1-205ENST00000471039 ZNF692Q9BU19 519 aaPredicted RBP17.31■□□□□ 0.36
SCNM1-205ENST00000471039 SLIT2O94813 1529 aa17.31■□□□□ 0.36
SCNM1-205ENST00000471039 TTC21BQ7Z4L5 1316 aa17.3■□□□□ 0.36
SCNM1-205ENST00000471039 PLEKHG5O94827 1062 aa17.3■□□□□ 0.36
SCNM1-205ENST00000471039 TERF2IPQ9NYB0 399 aa17.3■□□□□ 0.36
SCNM1-205ENST00000471039 RGS17Q9UGC6 210 aaPredicted RBP17.3■□□□□ 0.36
SCNM1-205ENST00000471039 RGPD5Q99666 1765 aa17.3■□□□□ 0.36
SCNM1-205ENST00000471039 AFF2P51816 1311 aa17.29■□□□□ 0.36
SCNM1-205ENST00000471039 HAP1P54257 671 aaPredicted RBP17.29■□□□□ 0.36
SCNM1-205ENST00000471039 ABTB2Q8N961 1025 aa17.29■□□□□ 0.36
SCNM1-205ENST00000471039 COL18A1P39060 1754 aa17.29■□□□□ 0.36
SCNM1-205ENST00000471039 OVOS2A0A0J9YW53 1432 aa17.29■□□□□ 0.36
SCNM1-205ENST00000471039 OVOS2Q6IE36 1432 aa17.29■□□□□ 0.36
SCNM1-205ENST00000471039 NUTM2GQ5VZR2 741 aa17.28■□□□□ 0.36
SCNM1-205ENST00000471039 BCL9LQ86UU0 1499 aa17.26■□□□□ 0.35
SCNM1-205ENST00000471039 USP31Q70CQ4 1352 aa17.26■□□□□ 0.35
SCNM1-205ENST00000471039 ABCC6O95255 1503 aa17.26■□□□□ 0.35
SCNM1-205ENST00000471039 NSD3Q9BZ95 1437 aa17.25■□□□□ 0.35
SCNM1-205ENST00000471039 NLRP13Q86W25 1043 aa17.25■□□□□ 0.35
SCNM1-205ENST00000471039 WNK3Q9BYP7 1800 aa17.25■□□□□ 0.35
SCNM1-205ENST00000471039 KIAA0232Q92628 1395 aa17.25■□□□□ 0.35
SCNM1-205ENST00000471039 GLI3P10071 1580 aa17.24■□□□□ 0.35
SCNM1-205ENST00000471039 ATRNO75882 1429 aa17.24■□□□□ 0.35
SCNM1-205ENST00000471039 C11orf95C9JLR9 678 aaPredicted RBP17.24■□□□□ 0.35
SCNM1-205ENST00000471039 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.24■□□□□ 0.35
SCNM1-205ENST00000471039 CPDO75976 1380 aa17.24■□□□□ 0.35
SCNM1-205ENST00000471039 KIF7Q2M1P5 1343 aa17.23■□□□□ 0.35
SCNM1-205ENST00000471039 NLRP6P59044 892 aa17.23■□□□□ 0.35
SCNM1-205ENST00000471039 ZNF772Q68DY9 489 aaPredicted RBP17.23■□□□□ 0.35
SCNM1-205ENST00000471039 NME9Q86XW9 330 aa17.23■□□□□ 0.35
SCNM1-205ENST00000471039 FNBP4Q8N3X1 1017 aaPredicted RBP17.23■□□□□ 0.35
SCNM1-205ENST00000471039 NGLY1Q96IV0 654 aa17.23■□□□□ 0.35
SCNM1-205ENST00000471039 POLR3GLQ9BT43 218 aa17.23■□□□□ 0.35
SCNM1-205ENST00000471039 POTEAQ6S8J7 498 aa17.22■□□□□ 0.35
SCNM1-205ENST00000471039 CAMTA1Q9Y6Y1 1673 aa17.21■□□□□ 0.35
SCNM1-205ENST00000471039 ZRANB1Q9UGI0 708 aa17.2■□□□□ 0.34
SCNM1-205ENST00000471039 USP21Q9UK80 565 aa17.2■□□□□ 0.34
SCNM1-205ENST00000471039 FAM208AQ9UK61 1670 aaKnown RBP17.2■□□□□ 0.34
SCNM1-205ENST00000471039 CCDC7Q96M83 1385 aa17.19■□□□□ 0.34
SCNM1-205ENST00000471039 GCP02774 474 aa17.19■□□□□ 0.34
SCNM1-205ENST00000471039 PRDM11Q9NQV5 511 aa17.19■□□□□ 0.34
SCNM1-205ENST00000471039 CDK12Q9NYV4 1490 aaPredicted RBP17.18■□□□□ 0.34
SCNM1-205ENST00000471039 FAM83GA6ND36 823 aa17.18■□□□□ 0.34
SCNM1-205ENST00000471039 ZC3H6P61129 1189 aaKnown RBP17.18■□□□□ 0.34
SCNM1-205ENST00000471039 ILDR2Q71H61 639 aa17.18■□□□□ 0.34
SCNM1-205ENST00000471039 BRWD3Q6RI45 1802 aa17.18■□□□□ 0.34
SCNM1-205ENST00000471039 COL5A2P05997 1499 aaPredicted RBP17.18■□□□□ 0.34
SCNM1-205ENST00000471039 CARD14Q9BXL6 1004 aa17.17■□□□□ 0.34
SCNM1-205ENST00000471039 PEAK1Q9H792 1746 aa17.17■□□□□ 0.34
SCNM1-205ENST00000471039 RGS12O14924 1447 aa17.16■□□□□ 0.34
SCNM1-205ENST00000471039 CHRNA2Q15822 529 aa17.16■□□□□ 0.34
SCNM1-205ENST00000471039 MAP2P11137 1827 aaKnown RBP17.16■□□□□ 0.34
SCNM1-205ENST00000471039 THSD7AQ9UPZ6 1657 aa17.16■□□□□ 0.34
SCNM1-205ENST00000471039 WASHC2AQ641Q2 1341 aa17.16■□□□□ 0.34
SCNM1-205ENST00000471039 UNC5CLQ8IV45 518 aa17.15■□□□□ 0.34
SCNM1-205ENST00000471039 KCNH5Q8NCM2 988 aa17.15■□□□□ 0.34
SCNM1-205ENST00000471039 TRPC5Q9UL62 973 aaPredicted RBP17.15■□□□□ 0.34
SCNM1-205ENST00000471039 AATKQ6ZMQ8 1374 aa17.15■□□□□ 0.34
SCNM1-205ENST00000471039 SOX12O15370 315 aa17.14■□□□□ 0.33
SCNM1-205ENST00000471039 ZEB1P37275 1124 aaPredicted RBP17.14■□□□□ 0.33
SCNM1-205ENST00000471039 BTG4Q9NY30 223 aa17.14■□□□□ 0.33
SCNM1-205ENST00000471039 RGPD2P0DJD1 1756 aa17.13■□□□□ 0.33
SCNM1-205ENST00000471039 QTRT2Q9H974 415 aaKnown RBP17.13■□□□□ 0.33
SCNM1-205ENST00000471039 FYB1O15117 783 aa17.12■□□□□ 0.33
SCNM1-205ENST00000471039 ARHGEF25Q86VW2 580 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms