RNA–Protein interactions for RNA: ENST00000470581.1

SEMA3C-207, Transcript of semaphorin 3C, humanhuman

TSL 3

Gene SEMA3C, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-207ENST00000470581 TESK2Q96S53 571 aa34.78■■■■□ 3.16
SEMA3C-207ENST00000470581 MARF1Q9Y4F3 1742 aaKnown RBP34.78■■■■□ 3.16
SEMA3C-207ENST00000470581 SLC24A1O60721 1099 aa34.75■■■■□ 3.15
SEMA3C-207ENST00000470581 ABCA3Q99758 1704 aa34.73■■■■□ 3.15
SEMA3C-207ENST00000470581 USP6P35125 1406 aa34.7■■■■□ 3.15
SEMA3C-207ENST00000470581 FNBP4Q8N3X1 1017 aaPredicted RBP34.69■■■■□ 3.14
SEMA3C-207ENST00000470581 BRD4O60885 1362 aaPredicted RBP34.69■■■■□ 3.14
SEMA3C-207ENST00000470581 NUTM2GQ5VZR2 741 aa34.68■■■■□ 3.14
SEMA3C-207ENST00000470581 ABTB2Q8N961 1025 aa34.68■■■■□ 3.14
SEMA3C-207ENST00000470581 PUS7Q96PZ0 661 aaKnown RBP34.68■■■■□ 3.14
SEMA3C-207ENST00000470581 ZNF692Q9BU19 519 aaPredicted RBP34.68■■■■□ 3.14
SEMA3C-207ENST00000470581 USP21Q9UK80 565 aa34.68■■■■□ 3.14
SEMA3C-207ENST00000470581 TMC1Q8TDI8 760 aa34.67■■■■□ 3.14
SEMA3C-207ENST00000470581 AKAP12Q02952 1782 aa34.65■■■■□ 3.14
SEMA3C-207ENST00000470581 QTRT2Q9H974 415 aaKnown RBP34.65■■■■□ 3.14
SEMA3C-207ENST00000470581 TMF1P82094 1093 aa34.64■■■■□ 3.14
SEMA3C-207ENST00000470581 CRYBG1Q9Y4K1 1723 aa34.64■■■■□ 3.14
SEMA3C-207ENST00000470581 CPSF1Q10570 1443 aaKnown RBP34.63■■■■□ 3.13
SEMA3C-207ENST00000470581 RXRBP28702 533 aa34.61■■■■□ 3.13
SEMA3C-207ENST00000470581 SLC12A5Q9H2X9 1139 aa34.61■■■■□ 3.13
SEMA3C-207ENST00000470581 SSH2Q76I76 1423 aa34.61■■■■□ 3.13
SEMA3C-207ENST00000470581 KTN1Q86UP2 1357 aaKnown RBP34.61■■■■□ 3.13
SEMA3C-207ENST00000470581 SOCS7O14512 581 aa34.59■■■■□ 3.13
SEMA3C-207ENST00000470581 BCL9LQ86UU0 1499 aa34.58■■■■□ 3.13
SEMA3C-207ENST00000470581 NLRP13Q86W25 1043 aa34.58■■■■□ 3.13
SEMA3C-207ENST00000470581 SLIT2O94813 1529 aa34.58■■■■□ 3.13
SEMA3C-207ENST00000470581 PHRF1Q9P1Y6 1649 aaKnown RBP34.58■■■■□ 3.13
SEMA3C-207ENST00000470581 TRPC5Q9UL62 973 aaPredicted RBP34.57■■■■□ 3.12
SEMA3C-207ENST00000470581 TTC21BQ7Z4L5 1316 aa34.56■■■■□ 3.12
SEMA3C-207ENST00000470581 FAM83GA6ND36 823 aa34.56■■■■□ 3.12
SEMA3C-207ENST00000470581 HDGFL2Q7Z4V5 671 aaPredicted RBP34.56■■■■□ 3.12
SEMA3C-207ENST00000470581 CD163L1Q9NR16 1453 aa34.55■■■■□ 3.12
SEMA3C-207ENST00000470581 EIF4G2P78344 907 aaKnown RBP eCLIP34.55■■■■□ 3.12
SEMA3C-207ENST00000470581 MON2Q7Z3U7 1717 aa34.55■■■■□ 3.12
SEMA3C-207ENST00000470581 NLRP6P59044 892 aa34.54■■■■□ 3.12
SEMA3C-207ENST00000470581 RBM6P78332 1123 aaKnown RBP34.54■■■■□ 3.12
SEMA3C-207ENST00000470581 UNC5CLQ8IV45 518 aa34.54■■■■□ 3.12
SEMA3C-207ENST00000470581 TERF2IPQ9NYB0 399 aa34.54■■■■□ 3.12
SEMA3C-207ENST00000470581 NINLQ9Y2I6 1382 aa34.53■■■■□ 3.12
SEMA3C-207ENST00000470581 CDCA8Q53HL2 280 aa34.53■■■■□ 3.12
SEMA3C-207ENST00000470581 ATRNO75882 1429 aa34.53■■■■□ 3.12
SEMA3C-207ENST00000470581 PLCH1Q4KWH8 1693 aa34.53■■■■□ 3.12
SEMA3C-207ENST00000470581 NRKQ7Z2Y5 1582 aa34.53■■■■□ 3.12
SEMA3C-207ENST00000470581 USP19O94966 1318 aa34.53■■■■□ 3.12
SEMA3C-207ENST00000470581 TTC21AQ8NDW8 1320 aa34.53■■■■□ 3.12
SEMA3C-207ENST00000470581 PIK3C2AO00443 1686 aa34.51■■■■□ 3.12
SEMA3C-207ENST00000470581 TNKS1BP1Q9C0C2 1729 aaKnown RBP34.51■■■■□ 3.12
SEMA3C-207ENST00000470581 COL14A1Q05707 1796 aaKnown RBP34.5■■■■□ 3.11
SEMA3C-207ENST00000470581 ZC3H6P61129 1189 aaKnown RBP34.5■■■■□ 3.11
SEMA3C-207ENST00000470581 PRDM11Q9NQV5 511 aa34.5■■■■□ 3.11
SEMA3C-207ENST00000470581 NWD2Q9ULI1 1742 aa34.5■■■■□ 3.11
SEMA3C-207ENST00000470581 HSPA5P11021 654 aaKnown RBP34.49■■■■□ 3.11
SEMA3C-207ENST00000470581 A0A1W2PP64 1363 aa34.49■■■■□ 3.11
SEMA3C-207ENST00000470581 KIAA0232Q92628 1395 aa34.49■■■■□ 3.11
SEMA3C-207ENST00000470581 GCP02774 474 aa34.47■■■■□ 3.11
SEMA3C-207ENST00000470581 SUGP2Q8IX01 1082 aaKnown RBP eCLIP34.47■■■■□ 3.11
SEMA3C-207ENST00000470581 BTG4Q9NY30 223 aa34.46■■■■□ 3.11
SEMA3C-207ENST00000470581 CDK12Q9NYV4 1490 aaPredicted RBP34.46■■■■□ 3.11
SEMA3C-207ENST00000470581 EDC4Q6P2E9 1401 aaKnown RBP34.44■■■■□ 3.1
SEMA3C-207ENST00000470581 CHRNA2Q15822 529 aa34.43■■■■□ 3.1
SEMA3C-207ENST00000470581 GJD4Q96KN9 370 aaPredicted RBP34.43■■■■□ 3.1
SEMA3C-207ENST00000470581 SLIT3O75094 1523 aa34.41■■■■□ 3.1
SEMA3C-207ENST00000470581 VPS72Q15906 364 aa34.4■■■■□ 3.1
SEMA3C-207ENST00000470581 NRAPQ86VF7 1730 aa34.4■■■■□ 3.1
SEMA3C-207ENST00000470581 CPDO75976 1380 aa34.39■■■■□ 3.1
SEMA3C-207ENST00000470581 ANKRD36BQ8N2N9 1353 aa34.39■■■■□ 3.1
SEMA3C-207ENST00000470581 NME9Q86XW9 330 aa34.39■■■■□ 3.1
SEMA3C-207ENST00000470581 CCDC9Q9Y3X0 531 aaKnown RBP34.39■■■■□ 3.1
SEMA3C-207ENST00000470581 RGS12O14924 1447 aa34.38■■■■□ 3.09
SEMA3C-207ENST00000470581 ZRANB1Q9UGI0 708 aa34.37■■■■□ 3.09
SEMA3C-207ENST00000470581 KCNH5Q8NCM2 988 aa34.35■■■■□ 3.09
SEMA3C-207ENST00000470581 POLR3GLQ9BT43 218 aa34.35■■■■□ 3.09
SEMA3C-207ENST00000470581 USP31Q70CQ4 1352 aa34.35■■■■□ 3.09
SEMA3C-207ENST00000470581 ZBTB7CA1YPR0 619 aa34.34■■■■□ 3.09
SEMA3C-207ENST00000470581 GLI3P10071 1580 aa34.34■■■■□ 3.09
SEMA3C-207ENST00000470581 SOX12O15370 315 aa34.33■■■■□ 3.09
SEMA3C-207ENST00000470581 MYOM1P52179 1685 aa34.32■■■■□ 3.08
SEMA3C-207ENST00000470581 USP54Q70EL1 1684 aa34.3■■■■□ 3.08
SEMA3C-207ENST00000470581 STRN4Q9NRL3 753 aa34.29■■■■□ 3.08
SEMA3C-207ENST00000470581 LMO7Q8WWI1 1683 aa34.28■■■■□ 3.08
SEMA3C-207ENST00000470581 EVA1CP58658 441 aa34.28■■■■□ 3.08
SEMA3C-207ENST00000470581 CAMTA1Q9Y6Y1 1673 aa34.28■■■■□ 3.08
SEMA3C-207ENST00000470581 NFAT5O94916 1531 aa34.25■■■■□ 3.07
SEMA3C-207ENST00000470581 AATKQ6ZMQ8 1374 aa34.25■■■■□ 3.07
SEMA3C-207ENST00000470581 ARHGEF25Q86VW2 580 aa34.25■■■■□ 3.07
SEMA3C-207ENST00000470581 SPATA31A5Q5VU36 1347 aa34.24■■■■□ 3.07
SEMA3C-207ENST00000470581 SPATA31A7Q8IWB4 1347 aa34.24■■■■□ 3.07
SEMA3C-207ENST00000470581 OVOS2A0A0J9YW53 1432 aa34.23■■■■□ 3.07
SEMA3C-207ENST00000470581 OVOS2Q6IE36 1432 aa34.23■■■■□ 3.07
SEMA3C-207ENST00000470581 COG3Q96JB2 828 aa34.21■■■■□ 3.07
SEMA3C-207ENST00000470581 C11orf95C9JLR9 678 aaPredicted RBP34.2■■■■□ 3.07
SEMA3C-207ENST00000470581 COL18A1P39060 1754 aa34.2■■■■□ 3.07
SEMA3C-207ENST00000470581 ONECUT3O60422 494 aaPredicted RBP34.19■■■■□ 3.06
SEMA3C-207ENST00000470581 FAM98CQ17RN3 349 aaKnown RBP34.19■■■■□ 3.06
SEMA3C-207ENST00000470581 CARD14Q9BXL6 1004 aa34.19■■■■□ 3.06
SEMA3C-207ENST00000470581 COL5A2P05997 1499 aaPredicted RBP34.19■■■■□ 3.06
SEMA3C-207ENST00000470581 LARP1Q6PKG0 1096 aaKnown RBP34.18■■■■□ 3.06
SEMA3C-207ENST00000470581 SEPT12Q8IYM1 358 aa34.18■■■■□ 3.06
SEMA3C-207ENST00000470581 SPATA31A1Q5TZJ5 1347 aa34.18■■■■□ 3.06
SEMA3C-207ENST00000470581 FYB1O15117 783 aa34.17■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms