RNA–Protein interactions for RNA: ENST00000470458.1

RFTN1-208, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 4

Gene RFTN1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-208ENST00000470458 QTRT2Q9H974 415 aaKnown RBP15.33■□□□□ 0.04
RFTN1-208ENST00000470458 ACEP12821 1306 aa15.33■□□□□ 0.04
RFTN1-208ENST00000470458 CDK12Q9NYV4 1490 aaPredicted RBP15.32■□□□□ 0.04
RFTN1-208ENST00000470458 CDCA8Q53HL2 280 aa15.31■□□□□ 0.04
RFTN1-208ENST00000470458 PPIP5K1Q6PFW1 1433 aa15.31■□□□□ 0.04
RFTN1-208ENST00000470458 TOPAZ1Q8N9V7 1692 aa15.3■□□□□ 0.04
RFTN1-208ENST00000470458 CABP2Q9NPB3 220 aa15.3■□□□□ 0.04
RFTN1-208ENST00000470458 NLRP13Q86W25 1043 aa15.29■□□□□ 0.04
RFTN1-208ENST00000470458 TRPM3Q9HCF6 1732 aaPredicted RBP15.29■□□□□ 0.04
RFTN1-208ENST00000470458 UNC5CLQ8IV45 518 aa15.28■□□□□ 0.04
RFTN1-208ENST00000470458 ABTB2Q8N961 1025 aa15.28■□□□□ 0.04
RFTN1-208ENST00000470458 CABP1Q9NZU7 370 aa15.28■□□□□ 0.04
RFTN1-208ENST00000470458 ALS2Q96Q42 1657 aa15.28■□□□□ 0.04
RFTN1-208ENST00000470458 NINLQ9Y2I6 1382 aa15.27■□□□□ 0.04
RFTN1-208ENST00000470458 TERF2IPQ9NYB0 399 aa15.26■□□□□ 0.03
RFTN1-208ENST00000470458 NWD2Q9ULI1 1742 aa15.26■□□□□ 0.03
RFTN1-208ENST00000470458 TTC21AQ8NDW8 1320 aa15.25■□□□□ 0.03
RFTN1-208ENST00000470458 TMF1P82094 1093 aa15.25■□□□□ 0.03
RFTN1-208ENST00000470458 HDGFL2Q7Z4V5 671 aaPredicted RBP15.25■□□□□ 0.03
RFTN1-208ENST00000470458 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.25■□□□□ 0.03
RFTN1-208ENST00000470458 GJD4Q96KN9 370 aaPredicted RBP15.23■□□□□ 0.03
RFTN1-208ENST00000470458 SLIT2O94813 1529 aa15.22■□□□□ 0.03
RFTN1-208ENST00000470458 ST20-MTHFSA0A0A6YYL1 179 aa15.22■□□□□ 0.03
RFTN1-208ENST00000470458 KCNH5Q8NCM2 988 aa15.22■□□□□ 0.03
RFTN1-208ENST00000470458 CABLES1Q8TDN4 633 aa15.22■□□□□ 0.03
RFTN1-208ENST00000470458 PRDM11Q9NQV5 511 aa15.22■□□□□ 0.03
RFTN1-208ENST00000470458 ATRNO75882 1429 aa15.22■□□□□ 0.03
RFTN1-208ENST00000470458 USP6P35125 1406 aa15.22■□□□□ 0.03
RFTN1-208ENST00000470458 COL14A1Q05707 1796 aaKnown RBP15.21■□□□□ 0.03
RFTN1-208ENST00000470458 BCL9LQ86UU0 1499 aa15.21■□□□□ 0.03
RFTN1-208ENST00000470458 VPS72Q15906 364 aa15.21■□□□□ 0.03
RFTN1-208ENST00000470458 TMC1Q8TDI8 760 aa15.21■□□□□ 0.03
RFTN1-208ENST00000470458 ABCA3Q99758 1704 aa15.2■□□□□ 0.02
RFTN1-208ENST00000470458 FAM83GA6ND36 823 aa15.2■□□□□ 0.02
RFTN1-208ENST00000470458 NLRP6P59044 892 aa15.2■□□□□ 0.02
RFTN1-208ENST00000470458 KTN1Q86UP2 1357 aaKnown RBP15.2■□□□□ 0.02
RFTN1-208ENST00000470458 USP47Q96K76 1375 aa15.2■□□□□ 0.02
RFTN1-208ENST00000470458 CCDC9Q9Y3X0 531 aaKnown RBP15.19■□□□□ 0.02
RFTN1-208ENST00000470458 AKAP12Q02952 1782 aa15.19■□□□□ 0.02
RFTN1-208ENST00000470458 EVA1CP58658 441 aa15.18■□□□□ 0.02
RFTN1-208ENST00000470458 BTG4Q9NY30 223 aa15.18■□□□□ 0.02
RFTN1-208ENST00000470458 CPDO75976 1380 aa15.18■□□□□ 0.02
RFTN1-208ENST00000470458 CPSF1Q10570 1443 aaKnown RBP15.17■□□□□ 0.02
RFTN1-208ENST00000470458 GCP02774 474 aa15.17■□□□□ 0.02
RFTN1-208ENST00000470458 CCDC125Q86Z20 511 aa15.17■□□□□ 0.02
RFTN1-208ENST00000470458 TESK2Q96S53 571 aa15.17■□□□□ 0.02
RFTN1-208ENST00000470458 USP19O94966 1318 aa15.17■□□□□ 0.02
RFTN1-208ENST00000470458 TTC21BQ7Z4L5 1316 aa15.17■□□□□ 0.02
RFTN1-208ENST00000470458 PLEKHG5O94827 1062 aa15.16■□□□□ 0.02
RFTN1-208ENST00000470458 PLCH1Q4KWH8 1693 aa15.16■□□□□ 0.02
RFTN1-208ENST00000470458 EIF4G2P78344 907 aaKnown RBP eCLIP15.15■□□□□ 0.02
RFTN1-208ENST00000470458 SSH2Q76I76 1423 aa15.15■□□□□ 0.02
RFTN1-208ENST00000470458 CRYBG1Q9Y4K1 1723 aa15.14■□□□□ 0.01
RFTN1-208ENST00000470458 KIAA0232Q92628 1395 aa15.14■□□□□ 0.01
RFTN1-208ENST00000470458 ONECUT3O60422 494 aaPredicted RBP15.14■□□□□ 0.01
RFTN1-208ENST00000470458 NUTM2GQ5VZR2 741 aa15.14■□□□□ 0.01
RFTN1-208ENST00000470458 EDC4Q6P2E9 1401 aaKnown RBP15.14■□□□□ 0.01
RFTN1-208ENST00000470458 PHRF1Q9P1Y6 1649 aaKnown RBP15.14■□□□□ 0.01
RFTN1-208ENST00000470458 ZC3H6P61129 1189 aaKnown RBP15.13■□□□□ 0.01
RFTN1-208ENST00000470458 MON2Q7Z3U7 1717 aa15.13■□□□□ 0.01
RFTN1-208ENST00000470458 C11orf95C9JLR9 678 aaPredicted RBP15.12■□□□□ 0.01
RFTN1-208ENST00000470458 SLC12A5Q9H2X9 1139 aa15.12■□□□□ 0.01
RFTN1-208ENST00000470458 THRAP3Q9Y2W1 955 aaKnown RBP15.12■□□□□ 0.01
RFTN1-208ENST00000470458 RGS12O14924 1447 aa15.11■□□□□ 0.01
RFTN1-208ENST00000470458 AATKQ6ZMQ8 1374 aa15.11■□□□□ 0.01
RFTN1-208ENST00000470458 USP31Q70CQ4 1352 aa15.11■□□□□ 0.01
RFTN1-208ENST00000470458 SPATA31A5Q5VU36 1347 aa15.1■□□□□ 0.01
RFTN1-208ENST00000470458 SPATA31A7Q8IWB4 1347 aa15.1■□□□□ 0.01
RFTN1-208ENST00000470458 ANKRD36BQ8N2N9 1353 aa15.1■□□□□ 0.01
RFTN1-208ENST00000470458 SLIT3O75094 1523 aa15.09■□□□□ 0.01
RFTN1-208ENST00000470458 NRAPQ86VF7 1730 aa15.09■□□□□ 0.01
RFTN1-208ENST00000470458 ABCC6O95255 1503 aa15.08■□□□□ 0.01
RFTN1-208ENST00000470458 NRKQ7Z2Y5 1582 aa15.08■□□□□ 0
RFTN1-208ENST00000470458 A0A0G2JS52 829 aa15.08■□□□□ 0
RFTN1-208ENST00000470458 MYT1Q01538 1121 aa15.08■□□□□ 0
RFTN1-208ENST00000470458 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.08■□□□□ 0
RFTN1-208ENST00000470458 SEPT12Q8IYM1 358 aa15.08■□□□□ 0
RFTN1-208ENST00000470458 UPF1Q92900 1129 aaKnown RBP eCLIP15.08■□□□□ 0
RFTN1-208ENST00000470458 CDCA7Q9BWT1 371 aaPredicted RBP15.08■□□□□ 0
RFTN1-208ENST00000470458 PIK3C2AO00443 1686 aa15.08■□□□□ 0
RFTN1-208ENST00000470458 SF3B2Q13435 895 aaKnown RBP15.07■□□□□ 0
RFTN1-208ENST00000470458 CHRNA2Q15822 529 aa15.07■□□□□ 0
RFTN1-208ENST00000470458 BARGINQ6ZT62 677 aa15.07■□□□□ 0
RFTN1-208ENST00000470458 COG3Q96JB2 828 aa15.07■□□□□ 0
RFTN1-208ENST00000470458 STRN4Q9NRL3 753 aa15.07■□□□□ 0
RFTN1-208ENST00000470458 A0A1W2PP64 1363 aa15.07■□□□□ 0
RFTN1-208ENST00000470458 KRT27Q7Z3Y8 459 aa15.06■□□□□ 0
RFTN1-208ENST00000470458 ARHGEF25Q86VW2 580 aa15.06■□□□□ 0
RFTN1-208ENST00000470458 SPATA31A1Q5TZJ5 1347 aa15.06■□□□□ 0
RFTN1-208ENST00000470458 GLI3P10071 1580 aa15.06■□□□□ 0
RFTN1-208ENST00000470458 USP54Q70EL1 1684 aa15.06■□□□□ 0
RFTN1-208ENST00000470458 TCP11L2Q8N4U5 519 aa15.05■□□□□ -0
RFTN1-208ENST00000470458 CD163L1Q9NR16 1453 aa15.04■□□□□ -0
RFTN1-208ENST00000470458 FAM98CQ17RN3 349 aaKnown RBP15.04■□□□□ -0
RFTN1-208ENST00000470458 ZBTB7CA1YPR0 619 aa15.03■□□□□ -0
RFTN1-208ENST00000470458 LMO7Q8WWI1 1683 aa15.03■□□□□ -0
RFTN1-208ENST00000470458 CRB1P82279 1406 aa15.02■□□□□ -0
RFTN1-208ENST00000470458 CSB-PGBD3P0DP91 1061 aa15.02■□□□□ -0
RFTN1-208ENST00000470458 PDE3BQ13370 1112 aa15.02■□□□□ -0
RFTN1-208ENST00000470458 TOM1L2Q6ZVM7 507 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms