RNA–Protein interactions for RNA: ENST00000470408.5

UBE3C-205, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 5,197 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-205ENST00000470408 CRBNQ96SW2 442 aa11.58□□□□□ -0.55
UBE3C-205ENST00000470408 AMOTQ4VCS5 1084 aa11.58□□□□□ -0.56
UBE3C-205ENST00000470408 PHF14O94880 888 aa11.58□□□□□ -0.56
UBE3C-205ENST00000470408 FAM184AQ8NB25 1140 aa11.58□□□□□ -0.56
UBE3C-205ENST00000470408 NECTIN2Q92692 538 aa11.58□□□□□ -0.56
UBE3C-205ENST00000470408 RBM42Q9BTD8 480 aaKnown RBP11.58□□□□□ -0.56
UBE3C-205ENST00000470408 A2MP01023 1474 aa11.58□□□□□ -0.56
UBE3C-205ENST00000470408 NSD2O96028 1365 aa11.58□□□□□ -0.56
UBE3C-205ENST00000470408 CCT4P50991 539 aaKnown RBP11.58□□□□□ -0.56
UBE3C-205ENST00000470408 WASLO00401 505 aaPredicted RBP11.57□□□□□ -0.56
UBE3C-205ENST00000470408 CLASRPQ8N2M8 674 aaKnown RBP11.57□□□□□ -0.56
UBE3C-205ENST00000470408 SF3A1Q15459 793 aaKnown RBP11.57□□□□□ -0.56
UBE3C-205ENST00000470408 TWISTNBQ3B726 338 aaPredicted RBP11.57□□□□□ -0.56
UBE3C-205ENST00000470408 C14orf93Q9H972 538 aaKnown RBP11.57□□□□□ -0.56
UBE3C-205ENST00000470408 ITSN2Q9NZM3 1697 aa11.57□□□□□ -0.56
UBE3C-205ENST00000470408 NUTM2BA6NNL0 878 aaPredicted RBP11.57□□□□□ -0.56
UBE3C-205ENST00000470408 NUTM2EB1AL46 878 aaPredicted RBP11.57□□□□□ -0.56
UBE3C-205ENST00000470408 HIP1O00291 1037 aa11.57□□□□□ -0.56
UBE3C-205ENST00000470408 PDE3AQ14432 1141 aa11.57□□□□□ -0.56
UBE3C-205ENST00000470408 HDGFL1Q5TGJ6 251 aa11.57□□□□□ -0.56
UBE3C-205ENST00000470408 NUTM2AQ8IVF1 878 aaPredicted RBP11.57□□□□□ -0.56
UBE3C-205ENST00000470408 UHRF1BP1LA0JNW5 1464 aa11.57□□□□□ -0.56
UBE3C-205ENST00000470408 AIMP1Q12904 312 aaKnown RBP11.56□□□□□ -0.56
UBE3C-205ENST00000470408 INTS3Q68E01 1043 aaKnown RBP11.56□□□□□ -0.56
UBE3C-205ENST00000470408 GNL3LQ9NVN8 582 aaKnown RBP11.56□□□□□ -0.56
UBE3C-205ENST00000470408 ERICH2A1L162 156 aa11.56□□□□□ -0.56
UBE3C-205ENST00000470408 TBC1D2BQ9UPU7 963 aa11.56□□□□□ -0.56
UBE3C-205ENST00000470408 H3BQV1 296 aa11.56□□□□□ -0.56
UBE3C-205ENST00000470408 TRIM29Q14134 588 aa11.56□□□□□ -0.56
UBE3C-205ENST00000470408 IFFO2Q5TF58 517 aa11.56□□□□□ -0.56
UBE3C-205ENST00000470408 NUP160Q12769 1436 aa11.56□□□□□ -0.56
UBE3C-205ENST00000470408 APPP05067 770 aa11.55□□□□□ -0.56
UBE3C-205ENST00000470408 PDE4AP27815 886 aa11.55□□□□□ -0.56
UBE3C-205ENST00000470408 EXOC6Q8TAG9 804 aa11.55□□□□□ -0.56
UBE3C-205ENST00000470408 SCAF11Q99590 1463 aaKnown RBP11.55□□□□□ -0.56
UBE3C-205ENST00000470408 TNNT3P45378 269 aaPredicted RBP11.55□□□□□ -0.56
UBE3C-205ENST00000470408 SKOR2Q2VWA4 1001 aaPredicted RBP11.54□□□□□ -0.56
UBE3C-205ENST00000470408 ABCC11Q96J66 1382 aa11.54□□□□□ -0.56
UBE3C-205ENST00000470408 ABCC2Q92887 1545 aa11.54□□□□□ -0.56
UBE3C-205ENST00000470408 NUP153P49790 1475 aaKnown RBP11.54□□□□□ -0.56
UBE3C-205ENST00000470408 FBXO31Q5XUX0 539 aaPredicted RBP11.54□□□□□ -0.56
UBE3C-205ENST00000470408 NSD3Q9BZ95 1437 aa11.54□□□□□ -0.56
UBE3C-205ENST00000470408 CPLX1O14810 134 aa11.54□□□□□ -0.56
UBE3C-205ENST00000470408 STARD3NLO95772 234 aa11.54□□□□□ -0.56
UBE3C-205ENST00000470408 KIAA0556O60303 1618 aa11.53□□□□□ -0.56
UBE3C-205ENST00000470408 GNAI2P04899 355 aa11.53□□□□□ -0.56
UBE3C-205ENST00000470408 PIP4K2BP78356 416 aa11.53□□□□□ -0.56
UBE3C-205ENST00000470408 NFE2L2Q16236 605 aa11.53□□□□□ -0.56
UBE3C-205ENST00000470408 DDX54Q8TDD1 881 aaKnown RBP11.53□□□□□ -0.56
UBE3C-205ENST00000470408 VSIG10Q8N0Z9 540 aa11.53□□□□□ -0.56
UBE3C-205ENST00000470408 TTC21BQ7Z4L5 1316 aa11.53□□□□□ -0.56
UBE3C-205ENST00000470408 NEUROD6Q96NK8 337 aa11.53□□□□□ -0.56
UBE3C-205ENST00000470408 MSH6P52701 1360 aa11.53□□□□□ -0.56
UBE3C-205ENST00000470408 PLIN1O60240 522 aa11.53□□□□□ -0.56
UBE3C-205ENST00000470408 GCC1Q96CN9 775 aa11.53□□□□□ -0.56
UBE3C-205ENST00000470408 GNAT3A8MTJ3 354 aa11.52□□□□□ -0.56
UBE3C-205ENST00000470408 CCDC47Q96A33 483 aaKnown RBP11.52□□□□□ -0.56
UBE3C-205ENST00000470408 SRCIN1Q9C0H9 1055 aa11.52□□□□□ -0.56
UBE3C-205ENST00000470408 EXOSC9Q06265 439 aaKnown RBP11.52□□□□□ -0.57
UBE3C-205ENST00000470408 RALYLQ86SE5 291 aaKnown RBP11.52□□□□□ -0.57
UBE3C-205ENST00000470408 PUS7Q96PZ0 661 aaKnown RBP11.52□□□□□ -0.57
UBE3C-205ENST00000470408 TOM1O60784 492 aa11.52□□□□□ -0.57
UBE3C-205ENST00000470408 CNTROBQ8N137 903 aa11.52□□□□□ -0.57
UBE3C-205ENST00000470408 SLC3A2P08195 630 aaKnown RBP11.52□□□□□ -0.57
UBE3C-205ENST00000470408 NOS1P29475 1434 aa11.51□□□□□ -0.57
UBE3C-205ENST00000470408 RPRD2Q5VT52 1461 aaKnown RBP11.51□□□□□ -0.57
UBE3C-205ENST00000470408 VPS53Q5VIR6 699 aa11.51□□□□□ -0.57
UBE3C-205ENST00000470408 TCEAL9Q9UHQ7 104 aa11.51□□□□□ -0.57
UBE3C-205ENST00000470408 ZNF652Q9Y2D9 606 aa11.51□□□□□ -0.57
UBE3C-205ENST00000470408 WAPLQ7Z5K2 1190 aa11.51□□□□□ -0.57
UBE3C-205ENST00000470408 FBXW7Q969H0 707 aa11.51□□□□□ -0.57
UBE3C-205ENST00000470408 PSMA5P28066 241 aa11.51□□□□□ -0.57
UBE3C-205ENST00000470408 CEBPAP49715 358 aaPredicted RBP11.51□□□□□ -0.57
UBE3C-205ENST00000470408 ADGRF5Q8IZF2 1346 aa11.5□□□□□ -0.57
UBE3C-205ENST00000470408 TTC21AQ8NDW8 1320 aa11.5□□□□□ -0.57
UBE3C-205ENST00000470408 CTTNBP2Q8WZ74 1663 aa11.5□□□□□ -0.57
UBE3C-205ENST00000470408 SURF6O75683 361 aaKnown RBP11.5□□□□□ -0.57
UBE3C-205ENST00000470408 ZC3H6P61129 1189 aaKnown RBP11.5□□□□□ -0.57
UBE3C-205ENST00000470408 CCDC158Q5M9N0 1113 aa11.5□□□□□ -0.57
UBE3C-205ENST00000470408 ANO2Q9NQ90 1003 aa11.5□□□□□ -0.57
UBE3C-205ENST00000470408 EIF4G3O43432 1585 aaKnown RBP11.5□□□□□ -0.57
UBE3C-205ENST00000470408 SLC4A2P04920 1241 aa11.5□□□□□ -0.57
UBE3C-205ENST00000470408 SART3Q15020 963 aaKnown RBP11.5□□□□□ -0.57
UBE3C-205ENST00000470408 BTBD11A6QL63 1104 aa11.49□□□□□ -0.57
UBE3C-205ENST00000470408 CDC45O75419 566 aa11.49□□□□□ -0.57
UBE3C-205ENST00000470408 SAFBQ15424 915 aaKnown RBP eCLIP11.49□□□□□ -0.577e-7■■■□□ 15.9
UBE3C-205ENST00000470408 SHANK2Q9UPX8 1470 aa11.49□□□□□ -0.57
UBE3C-205ENST00000470408 AMER1Q5JTC6 1135 aaPredicted RBP11.49□□□□□ -0.57
UBE3C-205ENST00000470408 KRT28Q7Z3Y7 464 aa11.49□□□□□ -0.57
UBE3C-205ENST00000470408 TEX13AQ9BXU3 409 aaPredicted RBP11.49□□□□□ -0.57
UBE3C-205ENST00000470408 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.49□□□□□ -0.57
UBE3C-205ENST00000470408 WASHC4Q2M389 1173 aa11.49□□□□□ -0.57
UBE3C-205ENST00000470408 NPHP3Q7Z494 1330 aa11.48□□□□□ -0.57
UBE3C-205ENST00000470408 ZSCAN25Q6NSZ9 544 aa11.48□□□□□ -0.57
UBE3C-205ENST00000470408 KLHL34Q8N239 644 aa11.48□□□□□ -0.57
UBE3C-205ENST00000470408 ARID3AQ99856 593 aa11.48□□□□□ -0.57
UBE3C-205ENST00000470408 HOOK1Q9UJC3 728 aaKnown RBP11.48□□□□□ -0.57
UBE3C-205ENST00000470408 HSP90AB3PQ58FF7 597 aa11.48□□□□□ -0.57
UBE3C-205ENST00000470408 CNNM1Q9NRU3 951 aa11.48□□□□□ -0.57
UBE3C-205ENST00000470408 XBP1P17861 261 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms