RNA–Protein interactions for RNA: ENST00000470086.5

LSM2-210, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 713 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-210ENST00000470086 RGPD3A6NKT7 1758 aaPredicted RBP12.84□□□□□ -0.35
LSM2-210ENST00000470086 RGPD4Q7Z3J3 1758 aa12.84□□□□□ -0.35
LSM2-210ENST00000470086 WNK3Q9BYP7 1800 aa12.84□□□□□ -0.35
LSM2-210ENST00000470086 BAG6P46379 1132 aa12.84□□□□□ -0.35
LSM2-210ENST00000470086 CCDC144AA2RUR9 1427 aa12.84□□□□□ -0.35
LSM2-210ENST00000470086 TECPR2O15040 1411 aa12.84□□□□□ -0.35
LSM2-210ENST00000470086 ROCK1Q13464 1354 aa12.83□□□□□ -0.36
LSM2-210ENST00000470086 PEAK1Q9H792 1746 aa12.82□□□□□ -0.36
LSM2-210ENST00000470086 FAM98CQ17RN3 349 aaKnown RBP12.82□□□□□ -0.36
LSM2-210ENST00000470086 NRXN1Q9ULB1 1477 aa12.82□□□□□ -0.36
LSM2-210ENST00000470086 GOLGB1Q14789 3259 aaKnown RBP12.8□□□□□ -0.36
LSM2-210ENST00000470086 PARP4Q9UKK3 1724 aaKnown RBP12.79□□□□□ -0.36
LSM2-210ENST00000470086 WAPLQ7Z5K2 1190 aa12.79□□□□□ -0.36
LSM2-210ENST00000470086 CCDC9Q9Y3X0 531 aaKnown RBP12.79□□□□□ -0.36
LSM2-210ENST00000470086 CAMKK2Q96RR4 588 aa12.78□□□□□ -0.36
LSM2-210ENST00000470086 LRRC37A3O60309 1634 aa12.77□□□□□ -0.36
LSM2-210ENST00000470086 A0A0G2JS52 829 aa12.77□□□□□ -0.37
LSM2-210ENST00000470086 FAM83GA6ND36 823 aa12.77□□□□□ -0.37
LSM2-210ENST00000470086 MYT1Q01538 1121 aa12.77□□□□□ -0.37
LSM2-210ENST00000470086 LMO7Q8WWI1 1683 aa12.77□□□□□ -0.37
LSM2-210ENST00000470086 LRPPRCP42704 1394 aaKnown RBP12.75□□□□□ -0.37
LSM2-210ENST00000470086 KRT28Q7Z3Y7 464 aa12.75□□□□□ -0.37
LSM2-210ENST00000470086 SHANK3Q9BYB0 1731 aa12.75□□□□□ -0.37
LSM2-210ENST00000470086 RRBP1Q9P2E9 1410 aaKnown RBP12.74□□□□□ -0.37
LSM2-210ENST00000470086 RBM42Q9BTD8 480 aaKnown RBP12.74□□□□□ -0.37
LSM2-210ENST00000470086 NINLQ9Y2I6 1382 aa12.73□□□□□ -0.37
LSM2-210ENST00000470086 ADGRF5Q8IZF2 1346 aa12.73□□□□□ -0.37
LSM2-210ENST00000470086 TRIM37O94972 964 aa12.73□□□□□ -0.37
LSM2-210ENST00000470086 IFFO2Q5TF58 517 aa12.73□□□□□ -0.37
LSM2-210ENST00000470086 AKAP12Q02952 1782 aa12.73□□□□□ -0.37
LSM2-210ENST00000470086 PIK3C2GO75747 1445 aa12.72□□□□□ -0.37
LSM2-210ENST00000470086 SBNO1A3KN83 1393 aa12.72□□□□□ -0.37
LSM2-210ENST00000470086 SPATA31A5Q5VU36 1347 aa12.72□□□□□ -0.37
LSM2-210ENST00000470086 SPATA31A7Q8IWB4 1347 aa12.72□□□□□ -0.37
LSM2-210ENST00000470086 MKRN4PQ13434 485 aaPredicted RBP12.72□□□□□ -0.37
LSM2-210ENST00000470086 ZNF784Q8NCA9 323 aaPredicted RBP12.72□□□□□ -0.37
LSM2-210ENST00000470086 BTG4Q9NY30 223 aa12.72□□□□□ -0.37
LSM2-210ENST00000470086 ITSN1Q15811 1721 aa12.71□□□□□ -0.37
LSM2-210ENST00000470086 TOPAZ1Q8N9V7 1692 aa12.71□□□□□ -0.37
LSM2-210ENST00000470086 SENP3-EIF4A1A0A087X0R7 540 aa12.71□□□□□ -0.37
LSM2-210ENST00000470086 PDGFDQ9GZP0 370 aaPredicted RBP12.71□□□□□ -0.37
LSM2-210ENST00000470086 STK26Q9P289 416 aa12.71□□□□□ -0.37
LSM2-210ENST00000470086 TUBGCP6Q96RT7 1819 aa12.71□□□□□ -0.38
LSM2-210ENST00000470086 YTHDC2Q9H6S0 1430 aaKnown RBP12.71□□□□□ -0.38
LSM2-210ENST00000470086 HAP1P54257 671 aaPredicted RBP12.69□□□□□ -0.38
LSM2-210ENST00000470086 TMEM132EQ6IEE7 984 aa12.69□□□□□ -0.38
LSM2-210ENST00000470086 ANO8Q9HCE9 1232 aaPredicted RBP12.69□□□□□ -0.38
LSM2-210ENST00000470086 SPATA31E1Q6ZUB1 1445 aa12.69□□□□□ -0.38
LSM2-210ENST00000470086 ARHGEF10O15013 1369 aa12.69□□□□□ -0.38
LSM2-210ENST00000470086 ITGAEP38570 1179 aa12.68□□□□□ -0.38
LSM2-210ENST00000470086 ARHGEF28Q8N1W1 1705 aaKnown RBP12.68□□□□□ -0.38
LSM2-210ENST00000470086 PARD3Q8TEW0 1356 aa12.68□□□□□ -0.38
LSM2-210ENST00000470086 PAPPAQ13219 1627 aa12.67□□□□□ -0.38
LSM2-210ENST00000470086 PHF8Q9UPP1 1060 aa12.67□□□□□ -0.38
LSM2-210ENST00000470086 ABCC11Q96J66 1382 aa12.67□□□□□ -0.38
LSM2-210ENST00000470086 RGPD5Q99666 1765 aa12.66□□□□□ -0.38
LSM2-210ENST00000470086 VGFO15240 615 aaPredicted RBP12.66□□□□□ -0.38
LSM2-210ENST00000470086 LMOD2Q6P5Q4 547 aa12.66□□□□□ -0.38
LSM2-210ENST00000470086 COL24A1Q17RW2 1714 aa12.65□□□□□ -0.38
LSM2-210ENST00000470086 SPATA31A1Q5TZJ5 1347 aa12.65□□□□□ -0.38
LSM2-210ENST00000470086 APBA3O96018 575 aa12.65□□□□□ -0.38
LSM2-210ENST00000470086 PMFBP1Q8TBY8 1022 aa12.65□□□□□ -0.38
LSM2-210ENST00000470086 TULP4Q9NRJ4 1543 aa12.64□□□□□ -0.39
LSM2-210ENST00000470086 KCNQ2O43526 872 aa12.64□□□□□ -0.39
LSM2-210ENST00000470086 ADGRB1O14514 1584 aa12.64□□□□□ -0.39
LSM2-210ENST00000470086 PRR36Q9H6K5 1346 aa12.63□□□□□ -0.39
LSM2-210ENST00000470086 KIAA0232Q92628 1395 aa12.63□□□□□ -0.39
LSM2-210ENST00000470086 SSH2Q76I76 1423 aa12.62□□□□□ -0.39
LSM2-210ENST00000470086 ANKARQ7Z5J8 1434 aa12.62□□□□□ -0.39
LSM2-210ENST00000470086 DLC1Q96QB1 1528 aa12.62□□□□□ -0.39
LSM2-210ENST00000470086 C1QTNF8P60827 252 aa12.62□□□□□ -0.39
LSM2-210ENST00000470086 PTF1AQ7RTS3 328 aa12.62□□□□□ -0.39
LSM2-210ENST00000470086 SPON1Q9HCB6 807 aa12.62□□□□□ -0.39
LSM2-210ENST00000470086 PPP1R1BQ9UD71 204 aaPredicted RBP12.62□□□□□ -0.39
LSM2-210ENST00000470086 PTGER2P43116 358 aa12.61□□□□□ -0.39
LSM2-210ENST00000470086 CHRNA2Q15822 529 aa12.61□□□□□ -0.39
LSM2-210ENST00000470086 COL18A1P39060 1754 aa12.61□□□□□ -0.39
LSM2-210ENST00000470086 RPGRIP1LQ68CZ1 1315 aa12.61□□□□□ -0.39
LSM2-210ENST00000470086 ATP7BP35670 1465 aa12.6□□□□□ -0.39
LSM2-210ENST00000470086 SAFB2Q14151 953 aaKnown RBP eCLIP12.6□□□□□ -0.39
LSM2-210ENST00000470086 NHSQ6T4R5 1651 aa12.59□□□□□ -0.39
LSM2-210ENST00000470086 QSER1Q2KHR3 1735 aa12.59□□□□□ -0.39
LSM2-210ENST00000470086 ACIN1Q9UKV3 1341 aaKnown RBP12.59□□□□□ -0.39
LSM2-210ENST00000470086 FAM196AQ6ZSG2 479 aa12.58□□□□□ -0.4
LSM2-210ENST00000470086 ZBTB7AO95365 584 aa12.57□□□□□ -0.4
LSM2-210ENST00000470086 PSME1Q06323 249 aa12.57□□□□□ -0.4
LSM2-210ENST00000470086 STRN4Q9NRL3 753 aa12.57□□□□□ -0.4
LSM2-210ENST00000470086 USP35Q9P2H5 1018 aa12.57□□□□□ -0.4
LSM2-210ENST00000470086 BTAF1O14981 1849 aa12.57□□□□□ -0.4
LSM2-210ENST00000470086 PRDM11Q9NQV5 511 aa12.56□□□□□ -0.4
LSM2-210ENST00000470086 COL5A2P05997 1499 aaPredicted RBP12.56□□□□□ -0.4
LSM2-210ENST00000470086 SPDYE2BA6NHP3 402 aa12.55□□□□□ -0.4
LSM2-210ENST00000470086 SPDYE6P0CI01 402 aa12.55□□□□□ -0.4
LSM2-210ENST00000470086 SPDYE2Q495Y8 402 aa12.55□□□□□ -0.4
LSM2-210ENST00000470086 FHDC1Q9C0D6 1143 aaPredicted RBP12.55□□□□□ -0.4
LSM2-210ENST00000470086 AKT1S1Q96B36 256 aa12.54□□□□□ -0.4
LSM2-210ENST00000470086 PRAM1Q96QH2 718 aa12.54□□□□□ -0.4
LSM2-210ENST00000470086 SGIP1Q9BQI5 828 aa12.54□□□□□ -0.4
LSM2-210ENST00000470086 HIRIP3Q9BW71 556 aaPredicted RBP12.54□□□□□ -0.4
LSM2-210ENST00000470086 PIK3C2AO00443 1686 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms