RNA–Protein interactions for RNA: ENST00000469896.1

COMMD2-202, Transcript of COMM domain containing 2, humanhuman

TSL 1 (best)

Gene COMMD2, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD2-202ENST00000469896 NEXMIFQ5QGS0 1516 aa17.4■□□□□ 0.38
COMMD2-202ENST00000469896 UTRNP46939 3433 aa17.38■□□□□ 0.37
COMMD2-202ENST00000469896 FAM83GA6ND36 823 aa17.38■□□□□ 0.37
COMMD2-202ENST00000469896 FAM50AQ14320 339 aaKnown RBP17.38■□□□□ 0.37
COMMD2-202ENST00000469896 LMOD2Q6P5Q4 547 aa17.38■□□□□ 0.37
COMMD2-202ENST00000469896 BTG4Q9NY30 223 aa17.38■□□□□ 0.37
COMMD2-202ENST00000469896 ARHGEF10O15013 1369 aa17.38■□□□□ 0.37
COMMD2-202ENST00000469896 NAIPQ13075 1403 aa17.38■□□□□ 0.37
COMMD2-202ENST00000469896 CEP350Q5VT06 3117 aa17.37■□□□□ 0.37
COMMD2-202ENST00000469896 REM2Q8IYK8 340 aaPredicted RBP17.36■□□□□ 0.37
COMMD2-202ENST00000469896 SPATA31A5Q5VU36 1347 aa17.35■□□□□ 0.37
COMMD2-202ENST00000469896 SPATA31A7Q8IWB4 1347 aa17.35■□□□□ 0.37
COMMD2-202ENST00000469896 KIF1AQ12756 1690 aa17.35■□□□□ 0.37
COMMD2-202ENST00000469896 CAMTA1Q9Y6Y1 1673 aa17.33■□□□□ 0.37
COMMD2-202ENST00000469896 SBNO1A3KN83 1393 aa17.32■□□□□ 0.36
COMMD2-202ENST00000469896 GIGYF1O75420 1035 aaPredicted RBP17.32■□□□□ 0.36
COMMD2-202ENST00000469896 NRAPQ86VF7 1730 aa17.3■□□□□ 0.36
COMMD2-202ENST00000469896 RREB1Q92766 1687 aa17.29■□□□□ 0.36
COMMD2-202ENST00000469896 THSD7AQ9UPZ6 1657 aa17.29■□□□□ 0.36
COMMD2-202ENST00000469896 PHF8Q9UPP1 1060 aa17.29■□□□□ 0.36
COMMD2-202ENST00000469896 RRBP1Q9P2E9 1410 aaKnown RBP17.29■□□□□ 0.36
COMMD2-202ENST00000469896 NUP188Q5SRE5 1749 aa17.28■□□□□ 0.36
COMMD2-202ENST00000469896 RPGRIP1LQ68CZ1 1315 aa17.27■□□□□ 0.36
COMMD2-202ENST00000469896 PDE3BQ13370 1112 aa17.27■□□□□ 0.36
COMMD2-202ENST00000469896 ROCK1Q13464 1354 aa17.27■□□□□ 0.35
COMMD2-202ENST00000469896 SPDYE2BA6NHP3 402 aa17.26■□□□□ 0.35
COMMD2-202ENST00000469896 SPDYE6P0CI01 402 aa17.26■□□□□ 0.35
COMMD2-202ENST00000469896 SPDYE2Q495Y8 402 aa17.26■□□□□ 0.35
COMMD2-202ENST00000469896 WAPLQ7Z5K2 1190 aa17.26■□□□□ 0.35
COMMD2-202ENST00000469896 ABCA3Q99758 1704 aa17.26■□□□□ 0.35
COMMD2-202ENST00000469896 COL14A1Q05707 1796 aaKnown RBP17.25■□□□□ 0.35
COMMD2-202ENST00000469896 STK26Q9P289 416 aa17.25■□□□□ 0.35
COMMD2-202ENST00000469896 CLTCL1P53675 1640 aa17.25■□□□□ 0.35
COMMD2-202ENST00000469896 SPATA31A1Q5TZJ5 1347 aa17.23■□□□□ 0.35
COMMD2-202ENST00000469896 TECPR2O15040 1411 aa17.23■□□□□ 0.35
COMMD2-202ENST00000469896 NRKQ7Z2Y5 1582 aa17.23■□□□□ 0.35
COMMD2-202ENST00000469896 FMN2Q9NZ56 1722 aa17.22■□□□□ 0.35
COMMD2-202ENST00000469896 PRDM11Q9NQV5 511 aa17.22■□□□□ 0.35
COMMD2-202ENST00000469896 NRXN1Q9ULB1 1477 aa17.21■□□□□ 0.35
COMMD2-202ENST00000469896 SYT17Q9BSW7 474 aa17.21■□□□□ 0.35
COMMD2-202ENST00000469896 KIF1BO60333 1816 aa17.21■□□□□ 0.35
COMMD2-202ENST00000469896 C11orf95C9JLR9 678 aaPredicted RBP17.2■□□□□ 0.34
COMMD2-202ENST00000469896 FHDC1Q9C0D6 1143 aaPredicted RBP17.2■□□□□ 0.34
COMMD2-202ENST00000469896 CHD4Q14839 1912 aa17.19■□□□□ 0.34
COMMD2-202ENST00000469896 ZBTB7AO95365 584 aa17.19■□□□□ 0.34
COMMD2-202ENST00000469896 ABCC11Q96J66 1382 aa17.18■□□□□ 0.34
COMMD2-202ENST00000469896 PITPNM1O00562 1244 aa17.18■□□□□ 0.34
COMMD2-202ENST00000469896 PLEKHH1Q9ULM0 1364 aa17.17■□□□□ 0.34
COMMD2-202ENST00000469896 PTGER2P43116 358 aa17.17■□□□□ 0.34
COMMD2-202ENST00000469896 STRN4Q9NRL3 753 aa17.17■□□□□ 0.34
COMMD2-202ENST00000469896 BARGINQ6ZT62 677 aa17.16■□□□□ 0.34
COMMD2-202ENST00000469896 USP35Q9P2H5 1018 aa17.16■□□□□ 0.34
COMMD2-202ENST00000469896 GPRASP1Q5JY77 1395 aa17.15■□□□□ 0.34
COMMD2-202ENST00000469896 MYOM1P52179 1685 aa17.15■□□□□ 0.34
COMMD2-202ENST00000469896 BCL11BQ9C0K0 894 aaPredicted RBP17.14■□□□□ 0.33
COMMD2-202ENST00000469896 DLC1Q96QB1 1528 aa17.14■□□□□ 0.33
COMMD2-202ENST00000469896 GPR162Q16538 588 aa17.13■□□□□ 0.33
COMMD2-202ENST00000469896 PMFBP1Q8TBY8 1022 aa17.13■□□□□ 0.33
COMMD2-202ENST00000469896 ANO8Q9HCE9 1232 aaPredicted RBP17.13■□□□□ 0.33
COMMD2-202ENST00000469896 CASZ1Q86V15 1759 aa17.12■□□□□ 0.33
COMMD2-202ENST00000469896 PLSCR1O15162 318 aa17.12■□□□□ 0.33
COMMD2-202ENST00000469896 EVA1CP58658 441 aa17.12■□□□□ 0.33
COMMD2-202ENST00000469896 PDGFDQ9GZP0 370 aaPredicted RBP17.11■□□□□ 0.33
COMMD2-202ENST00000469896 SIRT1Q96EB6 747 aa17.1■□□□□ 0.33
COMMD2-202ENST00000469896 MTFR1LQ9H019 292 aa17.1■□□□□ 0.33
COMMD2-202ENST00000469896 SSUH2Q9Y2M2 353 aa17.1■□□□□ 0.33
COMMD2-202ENST00000469896 TMEM132EQ6IEE7 984 aa17.09■□□□□ 0.33
COMMD2-202ENST00000469896 PIP4P2Q8N4L2 257 aa17.09■□□□□ 0.33
COMMD2-202ENST00000469896 TCP11L2Q8N4U5 519 aa17.09■□□□□ 0.33
COMMD2-202ENST00000469896 STK32BQ9NY57 414 aa17.09■□□□□ 0.33
COMMD2-202ENST00000469896 KIAA0232Q92628 1395 aa17.09■□□□□ 0.33
COMMD2-202ENST00000469896 ANKARQ7Z5J8 1434 aa17.09■□□□□ 0.33
COMMD2-202ENST00000469896 KNDC1Q76NI1 1749 aa17.09■□□□□ 0.33
COMMD2-202ENST00000469896 PPLO60437 1756 aa17.08■□□□□ 0.33
COMMD2-202ENST00000469896 IFT172Q9UG01 1749 aa17.08■□□□□ 0.32
COMMD2-202ENST00000469896 RGPD3A6NKT7 1758 aaPredicted RBP17.07■□□□□ 0.32
COMMD2-202ENST00000469896 RGPD4Q7Z3J3 1758 aa17.07■□□□□ 0.32
COMMD2-202ENST00000469896 YTHDC2Q9H6S0 1430 aaKnown RBP17.07■□□□□ 0.32
COMMD2-202ENST00000469896 MAP3K5Q99683 1374 aa17.07■□□□□ 0.32
COMMD2-202ENST00000469896 ADGRF5Q8IZF2 1346 aa17.07■□□□□ 0.32
COMMD2-202ENST00000469896 CHRNA2Q15822 529 aa17.07■□□□□ 0.32
COMMD2-202ENST00000469896 ARXQ96QS3 562 aa17.07■□□□□ 0.32
COMMD2-202ENST00000469896 OVOS2A0A0G2JMS6 1433 aa17.06■□□□□ 0.32
COMMD2-202ENST00000469896 OVOS2A0A0J9YW53 1432 aa17.06■□□□□ 0.32
COMMD2-202ENST00000469896 OVOS2Q6IE36 1432 aa17.06■□□□□ 0.32
COMMD2-202ENST00000469896 PAK3O75914 559 aaPredicted RBP17.06■□□□□ 0.32
COMMD2-202ENST00000469896 THRAP3Q9Y2W1 955 aaKnown RBP17.06■□□□□ 0.32
COMMD2-202ENST00000469896 RGPD8O14715 1765 aaPredicted RBP17.06■□□□□ 0.32
COMMD2-202ENST00000469896 SSH2Q76I76 1423 aa17.05■□□□□ 0.32
COMMD2-202ENST00000469896 ACIN1Q9UKV3 1341 aaKnown RBP17.05■□□□□ 0.32
COMMD2-202ENST00000469896 ALS2Q96Q42 1657 aa17.05■□□□□ 0.32
COMMD2-202ENST00000469896 ITGAEP38570 1179 aa17.05■□□□□ 0.32
COMMD2-202ENST00000469896 ZNF692Q9BU19 519 aaPredicted RBP17.05■□□□□ 0.32
COMMD2-202ENST00000469896 TRPM3Q9HCF6 1732 aaPredicted RBP17.04■□□□□ 0.32
COMMD2-202ENST00000469896 HSPA6P17066 643 aa17.04■□□□□ 0.32
COMMD2-202ENST00000469896 ANKRD30BQ9BXX2 1392 aa17.03■□□□□ 0.32
COMMD2-202ENST00000469896 FXR2P51116 673 aaKnown RBP eCLIP17.03■□□□□ 0.32
COMMD2-202ENST00000469896 SGIP1Q9BQI5 828 aa17.03■□□□□ 0.32
COMMD2-202ENST00000469896 SLC15A2Q16348 729 aa17.02■□□□□ 0.32
COMMD2-202ENST00000469896 EIF3AQ14152 1382 aaKnown RBP17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms