RNA–Protein interactions for RNA: ENST00000469504.1

COL4A3-204, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL4A3, Length 521 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-204ENST00000469504 PLCH1Q4KWH8 1693 aa15.83■□□□□ 0.13
COL4A3-204ENST00000469504 FAM83GA6ND36 823 aa15.83■□□□□ 0.12
COL4A3-204ENST00000469504 PLEKHG3A1L390 1219 aa15.82■□□□□ 0.12
COL4A3-204ENST00000469504 PAK3O75914 559 aaPredicted RBP15.82■□□□□ 0.12
COL4A3-204ENST00000469504 BLMP54132 1417 aaPredicted RBP15.82■□□□□ 0.12
COL4A3-204ENST00000469504 COL14A1Q05707 1796 aaKnown RBP15.82■□□□□ 0.12
COL4A3-204ENST00000469504 BRD4O60885 1362 aaPredicted RBP15.81■□□□□ 0.12
COL4A3-204ENST00000469504 SEPT12Q8IYM1 358 aa15.81■□□□□ 0.12
COL4A3-204ENST00000469504 CENPJQ9HC77 1338 aaPredicted RBP15.81■□□□□ 0.12
COL4A3-204ENST00000469504 CCDC9Q9Y3X0 531 aaKnown RBP15.81■□□□□ 0.12
COL4A3-204ENST00000469504 EP400Q96L91 3159 aa15.81■□□□□ 0.12
COL4A3-204ENST00000469504 NBPF1Q3BBV0 1214 aa15.8■□□□□ 0.12
COL4A3-204ENST00000469504 BTG4Q9NY30 223 aa15.8■□□□□ 0.12
COL4A3-204ENST00000469504 TOPAZ1Q8N9V7 1692 aa15.79■□□□□ 0.12
COL4A3-204ENST00000469504 ACEP12821 1306 aa15.78■□□□□ 0.12
COL4A3-204ENST00000469504 PLEKHG5O94827 1062 aa15.78■□□□□ 0.12
COL4A3-204ENST00000469504 NBPF8Q3BBV2 869 aa15.78■□□□□ 0.12
COL4A3-204ENST00000469504 KRT27Q7Z3Y8 459 aa15.78■□□□□ 0.12
COL4A3-204ENST00000469504 PRDM11Q9NQV5 511 aa15.78■□□□□ 0.12
COL4A3-204ENST00000469504 NRAPQ86VF7 1730 aa15.77■□□□□ 0.12
COL4A3-204ENST00000469504 SF3B2Q13435 895 aaKnown RBP15.77■□□□□ 0.12
COL4A3-204ENST00000469504 L3MBTL2Q969R5 705 aa15.77■□□□□ 0.12
COL4A3-204ENST00000469504 ZRANB1Q9UGI0 708 aa15.77■□□□□ 0.12
COL4A3-204ENST00000469504 CRYBG1Q9Y4K1 1723 aa15.77■□□□□ 0.11
COL4A3-204ENST00000469504 SRPK2P78362 688 aaKnown RBP15.76■□□□□ 0.11
COL4A3-204ENST00000469504 SPATA31A5Q5VU36 1347 aa15.75■□□□□ 0.11
COL4A3-204ENST00000469504 SPATA31A7Q8IWB4 1347 aa15.75■□□□□ 0.11
COL4A3-204ENST00000469504 PPIP5K1Q6PFW1 1433 aa15.75■□□□□ 0.11
COL4A3-204ENST00000469504 KIAA0232Q92628 1395 aa15.74■□□□□ 0.11
COL4A3-204ENST00000469504 FAM98CQ17RN3 349 aaKnown RBP15.73■□□□□ 0.11
COL4A3-204ENST00000469504 NLRP13Q86W25 1043 aa15.73■□□□□ 0.11
COL4A3-204ENST00000469504 ABTB2Q8N961 1025 aa15.73■□□□□ 0.11
COL4A3-204ENST00000469504 CPDO75976 1380 aa15.73■□□□□ 0.11
COL4A3-204ENST00000469504 PHRF1Q9P1Y6 1649 aaKnown RBP15.72■□□□□ 0.11
COL4A3-204ENST00000469504 USP19O94966 1318 aa15.72■□□□□ 0.11
COL4A3-204ENST00000469504 EVC2Q86UK5 1308 aa15.72■□□□□ 0.11
COL4A3-204ENST00000469504 A0A0G2JS52 829 aa15.72■□□□□ 0.11
COL4A3-204ENST00000469504 MYT1Q01538 1121 aa15.72■□□□□ 0.11
COL4A3-204ENST00000469504 ROCK2O75116 1388 aaKnown RBP15.72■□□□□ 0.11
COL4A3-204ENST00000469504 CABP2Q9NPB3 220 aa15.71■□□□□ 0.11
COL4A3-204ENST00000469504 BRWD3Q6RI45 1802 aa15.71■□□□□ 0.1
COL4A3-204ENST00000469504 SPATA31A1Q5TZJ5 1347 aa15.7■□□□□ 0.1
COL4A3-204ENST00000469504 QRICH2Q9H0J4 1663 aa15.7■□□□□ 0.1
COL4A3-204ENST00000469504 TRPM1Q7Z4N2 1603 aa15.7■□□□□ 0.1
COL4A3-204ENST00000469504 ZC3H6P61129 1189 aaKnown RBP15.69■□□□□ 0.1
COL4A3-204ENST00000469504 SIN3AQ96ST3 1273 aa15.69■□□□□ 0.1
COL4A3-204ENST00000469504 USP6P35125 1406 aa15.68■□□□□ 0.1
COL4A3-204ENST00000469504 THSD7AQ9UPZ6 1657 aa15.68■□□□□ 0.1
COL4A3-204ENST00000469504 NRKQ7Z2Y5 1582 aa15.68■□□□□ 0.1
COL4A3-204ENST00000469504 BAG6P46379 1132 aa15.68■□□□□ 0.1
COL4A3-204ENST00000469504 ZNF692Q9BU19 519 aaPredicted RBP15.68■□□□□ 0.1
COL4A3-204ENST00000469504 GCP02774 474 aa15.67■□□□□ 0.1
COL4A3-204ENST00000469504 EVA1CP58658 441 aa15.67■□□□□ 0.1
COL4A3-204ENST00000469504 NEUROD1Q13562 356 aa15.67■□□□□ 0.1
COL4A3-204ENST00000469504 CHRNA2Q15822 529 aa15.67■□□□□ 0.1
COL4A3-204ENST00000469504 NUTM2GQ5VZR2 741 aa15.67■□□□□ 0.1
COL4A3-204ENST00000469504 BARGINQ6ZT62 677 aa15.67■□□□□ 0.1
COL4A3-204ENST00000469504 CABP1Q9NZU7 370 aa15.67■□□□□ 0.1
COL4A3-204ENST00000469504 THRAP3Q9Y2W1 955 aaKnown RBP15.67■□□□□ 0.1
COL4A3-204ENST00000469504 SSH2Q76I76 1423 aa15.67■□□□□ 0.1
COL4A3-204ENST00000469504 SBNO2Q9Y2G9 1366 aa15.66■□□□□ 0.1
COL4A3-204ENST00000469504 SRCAPQ6ZRS2 3230 aa15.65■□□□□ 0.1
COL4A3-204ENST00000469504 DEFB132Q7Z7B7 95 aa15.65■□□□□ 0.1
COL4A3-204ENST00000469504 STRN4Q9NRL3 753 aa15.65■□□□□ 0.1
COL4A3-204ENST00000469504 DISP2A7MBM2 1401 aa15.65■□□□□ 0.1
COL4A3-204ENST00000469504 C11orf95C9JLR9 678 aaPredicted RBP15.64■□□□□ 0.09
COL4A3-204ENST00000469504 FAM196AQ6ZSG2 479 aa15.64■□□□□ 0.09
COL4A3-204ENST00000469504 LMO7Q8WWI1 1683 aa15.63■□□□□ 0.09
COL4A3-204ENST00000469504 NLRP6P59044 892 aa15.63■□□□□ 0.09
COL4A3-204ENST00000469504 TCP11L2Q8N4U5 519 aa15.63■□□□□ 0.09
COL4A3-204ENST00000469504 CAMTA1Q9Y6Y1 1673 aa15.63■□□□□ 0.09
COL4A3-204ENST00000469504 TTC21AQ8NDW8 1320 aa15.63■□□□□ 0.09
COL4A3-204ENST00000469504 SLIT3O75094 1523 aa15.63■□□□□ 0.09
COL4A3-204ENST00000469504 KCNH5Q8NCM2 988 aa15.62■□□□□ 0.09
COL4A3-204ENST00000469504 RGPD1P0DJD0 1748 aa15.62■□□□□ 0.09
COL4A3-204ENST00000469504 AATKQ6ZMQ8 1374 aa15.62■□□□□ 0.09
COL4A3-204ENST00000469504 COL5A2P05997 1499 aaPredicted RBP15.61■□□□□ 0.09
COL4A3-204ENST00000469504 TONSLQ96HA7 1378 aa15.61■□□□□ 0.09
COL4A3-204ENST00000469504 PDE3BQ13370 1112 aa15.6■□□□□ 0.09
COL4A3-204ENST00000469504 LARP1Q6PKG0 1096 aaKnown RBP15.6■□□□□ 0.09
COL4A3-204ENST00000469504 CARD11Q9BXL7 1154 aa15.6■□□□□ 0.09
COL4A3-204ENST00000469504 PARD3Q8TEW0 1356 aa15.6■□□□□ 0.09
COL4A3-204ENST00000469504 CRB1P82279 1406 aa15.6■□□□□ 0.09
COL4A3-204ENST00000469504 CPSF1Q10570 1443 aaKnown RBP15.6■□□□□ 0.09
COL4A3-204ENST00000469504 SLC24A1O60721 1099 aa15.59■□□□□ 0.09
COL4A3-204ENST00000469504 CNKSR2Q8WXI2 1034 aa15.59■□□□□ 0.09
COL4A3-204ENST00000469504 USP35Q9P2H5 1018 aa15.59■□□□□ 0.09
COL4A3-204ENST00000469504 TTC21BQ7Z4L5 1316 aa15.59■□□□□ 0.09
COL4A3-204ENST00000469504 PUS7Q96PZ0 661 aaKnown RBP15.58■□□□□ 0.08
COL4A3-204ENST00000469504 DCAF8L1A6NGE4 600 aa15.57■□□□□ 0.08
COL4A3-204ENST00000469504 PIK3C2AO00443 1686 aa15.57■□□□□ 0.08
COL4A3-204ENST00000469504 CDCA7Q9BWT1 371 aaPredicted RBP15.56■□□□□ 0.08
COL4A3-204ENST00000469504 KTN1Q86UP2 1357 aaKnown RBP15.56■□□□□ 0.08
COL4A3-204ENST00000469504 ABCC6O95255 1503 aa15.56■□□□□ 0.08
COL4A3-204ENST00000469504 EN1Q05925 392 aaPredicted RBP15.55■□□□□ 0.08
COL4A3-204ENST00000469504 FAM182BQ5T319 152 aa15.55■□□□□ 0.08
COL4A3-204ENST00000469504 ARHGEF25Q86VW2 580 aa15.55■□□□□ 0.08
COL4A3-204ENST00000469504 AKAP12Q02952 1782 aa15.54■□□□□ 0.08
COL4A3-204ENST00000469504 WDR17Q8IZU2 1322 aa15.54■□□□□ 0.08
COL4A3-204ENST00000469504 TNS1Q9HBL0 1735 aaKnown RBP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms