RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 BCL2L12Q9HB09 334 aa11.09□□□□□ -0.63
SMARCE1-207ENST00000469334 CWC22Q9HCG8 908 aaKnown RBP11.09□□□□□ -0.63
SMARCE1-207ENST00000469334 CGNQ9P2M7 1197 aaKnown RBP11.09□□□□□ -0.63
SMARCE1-207ENST00000469334 CLTCL1P53675 1640 aa11.09□□□□□ -0.63
SMARCE1-207ENST00000469334 TROQ12816 1431 aaPredicted RBP11.09□□□□□ -0.63
SMARCE1-207ENST00000469334 CT47B1P0C2W7 299 aaPredicted RBP11.08□□□□□ -0.64
SMARCE1-207ENST00000469334 SYCP1Q15431 976 aa11.08□□□□□ -0.64
SMARCE1-207ENST00000469334 BMP2KLQ5H9B9 411 aa11.08□□□□□ -0.64
SMARCE1-207ENST00000469334 GAS2L2Q8NHY3 880 aa11.08□□□□□ -0.64
SMARCE1-207ENST00000469334 CFAP44Q96MT7 982 aa11.08□□□□□ -0.64
SMARCE1-207ENST00000469334 TSPYL1Q9H0U9 437 aa11.08□□□□□ -0.64
SMARCE1-207ENST00000469334 GPATCH8Q9UKJ3 1502 aaKnown RBP11.08□□□□□ -0.64
SMARCE1-207ENST00000469334 NOLC1Q14978 699 aaKnown RBP eCLIP11.08□□□□□ -0.64
SMARCE1-207ENST00000469334 WDR63Q8IWG1 891 aa11.08□□□□□ -0.64
SMARCE1-207ENST00000469334 CEP152O94986 1710 aa11.07□□□□□ -0.64
SMARCE1-207ENST00000469334 SCAF11Q99590 1463 aaKnown RBP11.07□□□□□ -0.64
SMARCE1-207ENST00000469334 CHAF1AQ13111 956 aaPredicted RBP11.07□□□□□ -0.64
SMARCE1-207ENST00000469334 UVSSAQ2YD98 709 aa11.07□□□□□ -0.64
SMARCE1-207ENST00000469334 CREBRFQ8IUR6 639 aa11.07□□□□□ -0.64
SMARCE1-207ENST00000469334 DMRT2Q9Y5R5 561 aa11.07□□□□□ -0.64
SMARCE1-207ENST00000469334 NUP153P49790 1475 aaKnown RBP11.07□□□□□ -0.64
SMARCE1-207ENST00000469334 POLR3AO14802 1390 aaPredicted RBP11.07□□□□□ -0.64
SMARCE1-207ENST00000469334 UNC13BO14795 1591 aa11.06□□□□□ -0.64
SMARCE1-207ENST00000469334 C9orf84Q5VXU9 1444 aa11.06□□□□□ -0.64
SMARCE1-207ENST00000469334 ZKSCAN2Q63HK3 967 aa11.06□□□□□ -0.64
SMARCE1-207ENST00000469334 FAM184AQ8NB25 1140 aa11.06□□□□□ -0.64
SMARCE1-207ENST00000469334 DDX19BQ9UMR2 479 aa11.06□□□□□ -0.64
SMARCE1-207ENST00000469334 ARHGEF5Q12774 1597 aa11.05□□□□□ -0.64
SMARCE1-207ENST00000469334 CTIFO43310 598 aaKnown RBP11.05□□□□□ -0.64
SMARCE1-207ENST00000469334 IRX5P78411 483 aaPredicted RBP11.05□□□□□ -0.64
SMARCE1-207ENST00000469334 RABEP1Q15276 862 aa11.05□□□□□ -0.64
SMARCE1-207ENST00000469334 DZIP1LQ8IYY4 767 aaKnown RBP11.05□□□□□ -0.64
SMARCE1-207ENST00000469334 SYAP1Q96A49 352 aaPredicted RBP11.05□□□□□ -0.64
SMARCE1-207ENST00000469334 PHF23Q9BUL5 403 aaPredicted RBP11.05□□□□□ -0.64
SMARCE1-207ENST00000469334 CFDP1Q9UEE9 299 aaPredicted RBP11.05□□□□□ -0.64
SMARCE1-207ENST00000469334 CD2BP2O95400 341 aaKnown RBP11.05□□□□□ -0.64
SMARCE1-207ENST00000469334 KLHL34Q8N239 644 aa11.05□□□□□ -0.64
SMARCE1-207ENST00000469334 TSPY26PQ9H489 355 aa11.05□□□□□ -0.64
SMARCE1-207ENST00000469334 KIAA0556O60303 1618 aa11.04□□□□□ -0.64
SMARCE1-207ENST00000469334 PHF14O94880 888 aa11.04□□□□□ -0.64
SMARCE1-207ENST00000469334 NUCB1Q02818 461 aa11.04□□□□□ -0.64
SMARCE1-207ENST00000469334 CCDC27Q2M243 656 aa11.04□□□□□ -0.64
SMARCE1-207ENST00000469334 GPT2Q8TD30 523 aa11.04□□□□□ -0.64
SMARCE1-207ENST00000469334 MADDQ8WXG6 1647 aa11.03□□□□□ -0.64
SMARCE1-207ENST00000469334 VGLL3A8MV65 326 aa11.03□□□□□ -0.64
SMARCE1-207ENST00000469334 TPM3P06753 285 aa11.03□□□□□ -0.64
SMARCE1-207ENST00000469334 TIGD1Q96MW7 591 aa11.03□□□□□ -0.64
SMARCE1-207ENST00000469334 FOXD4L1Q9NU39 408 aa11.03□□□□□ -0.64
SMARCE1-207ENST00000469334 SYCE3A1L190 88 aa11.03□□□□□ -0.64
SMARCE1-207ENST00000469334 TEX2Q8IWB9 1127 aa11.03□□□□□ -0.64
SMARCE1-207ENST00000469334 TMEM63CQ9P1W3 806 aa11.03□□□□□ -0.64
SMARCE1-207ENST00000469334 CALCOCO1Q9P1Z2 691 aa11.03□□□□□ -0.64
SMARCE1-207ENST00000469334 ADGRL1O94910 1474 aa11.03□□□□□ -0.64
SMARCE1-207ENST00000469334 SPDYE4A6NLX3 237 aa11.02□□□□□ -0.64
SMARCE1-207ENST00000469334 ATP10AO60312 1499 aa11.02□□□□□ -0.65
SMARCE1-207ENST00000469334 TTC37Q6PGP7 1564 aa11.02□□□□□ -0.65
SMARCE1-207ENST00000469334 IQGAP3Q86VI3 1631 aa11.02□□□□□ -0.65
SMARCE1-207ENST00000469334 U2AF2P26368 475 aaKnown RBP eCLIP11.02□□□□□ -0.658e-11■■■■□ 22.5
SMARCE1-207ENST00000469334 PPRC1Q5VV67 1664 aaKnown RBP11.02□□□□□ -0.65
SMARCE1-207ENST00000469334 PLB1Q6P1J6 1458 aa11.01□□□□□ -0.65
SMARCE1-207ENST00000469334 ANKRD36BQ8N2N9 1353 aa11.01□□□□□ -0.65
SMARCE1-207ENST00000469334 PRPF40AO75400 957 aaKnown RBP11.01□□□□□ -0.65
SMARCE1-207ENST00000469334 KCNJ4P48050 445 aa11.01□□□□□ -0.65
SMARCE1-207ENST00000469334 IRX3P78415 501 aaPredicted RBP11.01□□□□□ -0.65
SMARCE1-207ENST00000469334 TSC1Q92574 1164 aa11.01□□□□□ -0.65
SMARCE1-207ENST00000469334 RUNDC1Q96C34 613 aa11.01□□□□□ -0.65
SMARCE1-207ENST00000469334 RBM27Q9P2N5 1060 aaKnown RBP11.01□□□□□ -0.65
SMARCE1-207ENST00000469334 TNNQ9UQP3 1299 aa11.01□□□□□ -0.65
SMARCE1-207ENST00000469334 KIAA1210Q9ULL0 1709 aa11.01□□□□□ -0.65
SMARCE1-207ENST00000469334 ADGRB2O60241 1585 aa11.01□□□□□ -0.65
SMARCE1-207ENST00000469334 DUOX2Q9NRD8 1548 aa11.01□□□□□ -0.65
SMARCE1-207ENST00000469334 TULP2O00295 520 aa11□□□□□ -0.65
SMARCE1-207ENST00000469334 SLFN14P0C7P3 912 aa11□□□□□ -0.65
SMARCE1-207ENST00000469334 SPHKAPQ2M3C7 1700 aa11□□□□□ -0.65
SMARCE1-207ENST00000469334 ADAMTS12P58397 1594 aa11□□□□□ -0.65
SMARCE1-207ENST00000469334 CHRM1P11229 460 aaPredicted RBP11□□□□□ -0.65
SMARCE1-207ENST00000469334 PAXIP1Q6ZW49 1069 aaPredicted RBP11□□□□□ -0.65
SMARCE1-207ENST00000469334 CHD1LQ86WJ1 897 aa11□□□□□ -0.65
SMARCE1-207ENST00000469334 JARID2Q92833 1246 aaPredicted RBP10.99□□□□□ -0.65
SMARCE1-207ENST00000469334 DDX41Q9UJV9 622 aaKnown RBP10.99□□□□□ -0.65
SMARCE1-207ENST00000469334 MORC2Q9Y6X9 1032 aaPredicted RBP10.99□□□□□ -0.65
SMARCE1-207ENST00000469334 CTNNA3Q9UI47 895 aa10.99□□□□□ -0.65
SMARCE1-207ENST00000469334 PLA2R1Q13018 1463 aa10.98□□□□□ -0.65
SMARCE1-207ENST00000469334 RIOK3O14730 519 aaKnown RBP10.98□□□□□ -0.65
SMARCE1-207ENST00000469334 CDC45O75419 566 aa10.98□□□□□ -0.65
SMARCE1-207ENST00000469334 TBC1D9Q6ZT07 1266 aa10.98□□□□□ -0.65
SMARCE1-207ENST00000469334 TERF2Q15554 542 aa10.97□□□□□ -0.65
SMARCE1-207ENST00000469334 PLCD3Q8N3E9 789 aa10.97□□□□□ -0.65
SMARCE1-207ENST00000469334 USP32Q8NFA0 1604 aa10.97□□□□□ -0.65
SMARCE1-207ENST00000469334 GCC1Q96CN9 775 aa10.97□□□□□ -0.65
SMARCE1-207ENST00000469334 MED14O60244 1454 aa10.96□□□□□ -0.65
SMARCE1-207ENST00000469334 PRG4Q92954 1404 aaPredicted RBP10.96□□□□□ -0.65
SMARCE1-207ENST00000469334 ZBTB22O15209 634 aa10.96□□□□□ -0.65
SMARCE1-207ENST00000469334 ST18O60284 1047 aa10.96□□□□□ -0.65
SMARCE1-207ENST00000469334 KRT222Q8N1A0 295 aa10.96□□□□□ -0.65
SMARCE1-207ENST00000469334 RNF214Q8ND24 703 aa10.96□□□□□ -0.65
SMARCE1-207ENST00000469334 KIAA1524Q8TCG1 905 aa10.96□□□□□ -0.65
SMARCE1-207ENST00000469334 RBM42Q9BTD8 480 aaKnown RBP10.96□□□□□ -0.65
SMARCE1-207ENST00000469334 YY1AP1Q9H869 796 aa10.96□□□□□ -0.65
SMARCE1-207ENST00000469334 ZBTB40Q9NUA8 1239 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 428.7 ms