RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 CRIPAKQ8N1N5 446 aa11□□□□□ -0.65
LSM5-209ENST00000468872 BAP1Q92560 729 aa11□□□□□ -0.65
LSM5-209ENST00000468872 TSC1Q92574 1164 aa11□□□□□ -0.65
LSM5-209ENST00000468872 F12P00748 615 aaPredicted RBP10.99□□□□□ -0.65
LSM5-209ENST00000468872 LINC01559Q495D7 138 aa10.99□□□□□ -0.65
LSM5-209ENST00000468872 ZNF787Q6DD87 383 aa10.99□□□□□ -0.65
LSM5-209ENST00000468872 EHBP1Q8NDI1 1231 aa10.99□□□□□ -0.65
LSM5-209ENST00000468872 MAP10Q9P2G4 905 aa10.99□□□□□ -0.65
LSM5-209ENST00000468872 PLEKHG3A1L390 1219 aa10.97□□□□□ -0.65
LSM5-209ENST00000468872 SKIV2LQ15477 1246 aaKnown RBP10.97□□□□□ -0.65
LSM5-209ENST00000468872 SH3D19Q5HYK7 790 aa10.97□□□□□ -0.65
LSM5-209ENST00000468872 ZNF511Q8NB15 262 aa10.97□□□□□ -0.65
LSM5-209ENST00000468872 SIAH2O43255 324 aa10.96□□□□□ -0.65
LSM5-209ENST00000468872 CTC1Q2NKJ3 1217 aa10.96□□□□□ -0.65
LSM5-209ENST00000468872 ALDH1A1P00352 501 aa10.95□□□□□ -0.66
LSM5-209ENST00000468872 HELBQ8NG08 1087 aaPredicted RBP10.95□□□□□ -0.66
LSM5-209ENST00000468872 POTECB2RU33 542 aa10.94□□□□□ -0.66
LSM5-209ENST00000468872 AXIN1O15169 862 aa10.94□□□□□ -0.66
LSM5-209ENST00000468872 SMCPP49901 116 aaPredicted RBP10.94□□□□□ -0.66
LSM5-209ENST00000468872 PROCA1Q8NCQ7 364 aaPredicted RBP10.94□□□□□ -0.66
LSM5-209ENST00000468872 HPS1Q92902 700 aa10.93□□□□□ -0.66
LSM5-209ENST00000468872 DACH1Q9UI36 760 aa10.93□□□□□ -0.66
LSM5-209ENST00000468872 FBXO31Q5XUX0 539 aaPredicted RBP10.92□□□□□ -0.66
LSM5-209ENST00000468872 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.92□□□□□ -0.66
LSM5-209ENST00000468872 VARSP26640 1264 aaKnown RBP10.91□□□□□ -0.66
LSM5-209ENST00000468872 ATP1B4Q9UN42 357 aaPredicted RBP10.9□□□□□ -0.66
LSM5-209ENST00000468872 CTDSPL2Q05D32 466 aa10.89□□□□□ -0.67
LSM5-209ENST00000468872 NEUROD2Q15784 382 aa10.89□□□□□ -0.67
LSM5-209ENST00000468872 FOXJ1Q92949 421 aa10.89□□□□□ -0.67
LSM5-209ENST00000468872 TLL2Q9Y6L7 1015 aa10.89□□□□□ -0.67
LSM5-209ENST00000468872 WASF2Q9Y6W5 498 aa10.88□□□□□ -0.67
LSM5-209ENST00000468872 PPP2R2DQ66LE6 453 aa10.87□□□□□ -0.67
LSM5-209ENST00000468872 ARMC2Q8NEN0 867 aa10.86□□□□□ -0.67
LSM5-209ENST00000468872 BRPF1P55201 1214 aaPredicted RBP10.85□□□□□ -0.67
LSM5-209ENST00000468872 MPNDQ8N594 471 aa10.85□□□□□ -0.67
LSM5-209ENST00000468872 GMPR2Q9P2T1 348 aaKnown RBP10.85□□□□□ -0.67
LSM5-209ENST00000468872 AGERQ15109 404 aa10.84□□□□□ -0.67
LSM5-209ENST00000468872 C4orf48Q5BLP8 95 aa10.84□□□□□ -0.67
LSM5-209ENST00000468872 FAM174AQ8TBP5 190 aa10.84□□□□□ -0.67
LSM5-209ENST00000468872 LRRN4Q8WUT4 740 aa10.84□□□□□ -0.67
LSM5-209ENST00000468872 NBPF14Q5TI25 921 aa10.83□□□□□ -0.68
LSM5-209ENST00000468872 BPHLQ86WA6 291 aaPredicted RBP10.83□□□□□ -0.68
LSM5-209ENST00000468872 IL27Q8NEV9 243 aa10.83□□□□□ -0.68
LSM5-209ENST00000468872 ATP13A2Q9NQ11 1180 aa10.83□□□□□ -0.68
LSM5-209ENST00000468872 ZNF775Q96BV0 537 aaPredicted RBP10.82□□□□□ -0.68
LSM5-209ENST00000468872 GOPCQ9HD26 462 aa10.82□□□□□ -0.68
LSM5-209ENST00000468872 AP1G2O75843 785 aa10.81□□□□□ -0.68
LSM5-209ENST00000468872 C11orf95C9JLR9 678 aaPredicted RBP10.8□□□□□ -0.68
LSM5-209ENST00000468872 NNTQ13423 1086 aa10.8□□□□□ -0.68
LSM5-209ENST00000468872 TMEM132AQ24JP5 1023 aa10.8□□□□□ -0.68
LSM5-209ENST00000468872 SH3RF1Q7Z6J0 888 aa10.8□□□□□ -0.68
LSM5-209ENST00000468872 CDK15Q96Q40 435 aa10.8□□□□□ -0.68
LSM5-209ENST00000468872 ADH1CP00326 375 aa10.79□□□□□ -0.68
LSM5-209ENST00000468872 SH3BP5LQ7L8J4 393 aa10.79□□□□□ -0.68
LSM5-209ENST00000468872 CAPN5O15484 640 aaPredicted RBP10.78□□□□□ -0.68
LSM5-209ENST00000468872 RFC5P40937 340 aa10.78□□□□□ -0.68
LSM5-209ENST00000468872 ARID5BQ14865 1188 aa10.78□□□□□ -0.68
LSM5-209ENST00000468872 NR6A1Q15406 480 aa10.78□□□□□ -0.68
LSM5-209ENST00000468872 GPKOWQ92917 476 aaPredicted RBP eCLIP10.78□□□□□ -0.68
LSM5-209ENST00000468872 PCMTD1Q96MG8 357 aaPredicted RBP10.78□□□□□ -0.68
LSM5-209ENST00000468872 C1QTNF2Q9BXJ5 285 aa10.77□□□□□ -0.69
LSM5-209ENST00000468872 MAGEB6P1A0A0J9YX57 407 aa10.76□□□□□ -0.69
LSM5-209ENST00000468872 FKBPLQ9UIM3 349 aa10.76□□□□□ -0.69
LSM5-209ENST00000468872 USP17L8P0C7I0 530 aa10.75□□□□□ -0.69
LSM5-209ENST00000468872 SENP2Q9HC62 589 aa10.75□□□□□ -0.69
LSM5-209ENST00000468872 BMP1P13497 986 aa10.74□□□□□ -0.69
LSM5-209ENST00000468872 SNRPBP14678 240 aaKnown RBP10.74□□□□□ -0.69
LSM5-209ENST00000468872 GRM5P41594 1212 aa10.74□□□□□ -0.69
LSM5-209ENST00000468872 TRIM47Q96LD4 638 aa10.74□□□□□ -0.69
LSM5-209ENST00000468872 CARD14Q9BXL6 1004 aa10.74□□□□□ -0.69
LSM5-209ENST00000468872 HMX1Q9NP08 348 aaPredicted RBP10.74□□□□□ -0.69
LSM5-209ENST00000468872 NR5A1Q13285 461 aa10.73□□□□□ -0.69
LSM5-209ENST00000468872 PDXDC2PQ6P474 469 aa10.73□□□□□ -0.69
LSM5-209ENST00000468872 TRMT44Q8IYL2 757 aaKnown RBP10.73□□□□□ -0.69
LSM5-209ENST00000468872 KLF16Q9BXK1 252 aaPredicted RBP10.73□□□□□ -0.69
LSM5-209ENST00000468872 NR3C2P08235 984 aa10.72□□□□□ -0.69
LSM5-209ENST00000468872 TIMP2P16035 220 aa10.72□□□□□ -0.69
LSM5-209ENST00000468872 WDR4P57081 412 aaKnown RBP10.72□□□□□ -0.69
LSM5-209ENST00000468872 TRIM46Q7Z4K8 759 aa10.72□□□□□ -0.69
LSM5-209ENST00000468872 EPS8L1Q8TE68 723 aa10.72□□□□□ -0.69
LSM5-209ENST00000468872 KIFC2Q96AC6 838 aa10.72□□□□□ -0.69
LSM5-209ENST00000468872 ERFEQ4G0M1 354 aa10.71□□□□□ -0.69
LSM5-209ENST00000468872 ARHGAP9Q9BRR9 750 aa10.71□□□□□ -0.69
LSM5-209ENST00000468872 ZC3H4Q9UPT8 1303 aaKnown RBP10.71□□□□□ -0.69
LSM5-209ENST00000468872 MAP4K5Q9Y4K4 846 aa10.71□□□□□ -0.69
LSM5-209ENST00000468872 VASH1Q7L8A9 365 aaPredicted RBP10.7□□□□□ -0.7
LSM5-209ENST00000468872 GTF3C3Q9Y5Q9 886 aa10.7□□□□□ -0.7
LSM5-209ENST00000468872 FSHRP23945 695 aa10.69□□□□□ -0.7
LSM5-209ENST00000468872 TMEM259Q4ZIN3 620 aa10.69□□□□□ -0.7
LSM5-209ENST00000468872 ITPKCQ96DU7 683 aa10.68□□□□□ -0.7
LSM5-209ENST00000468872 ZIC2O95409 532 aaPredicted RBP10.67□□□□□ -0.7
LSM5-209ENST00000468872 PTK2Q05397 1052 aa10.67□□□□□ -0.7
LSM5-209ENST00000468872 OCSTAMPQ9BR26 566 aa10.67□□□□□ -0.7
LSM5-209ENST00000468872 ZFAND3Q9H8U3 227 aa10.67□□□□□ -0.7
LSM5-209ENST00000468872 ZBTB33Q86T24 672 aa10.66□□□□□ -0.7
LSM5-209ENST00000468872 PNMA1Q8ND90 353 aa10.66□□□□□ -0.7
LSM5-209ENST00000468872 GPSM3Q9Y4H4 160 aa10.66□□□□□ -0.7
LSM5-209ENST00000468872 MRPL14Q6P1L8 145 aaKnown RBP10.65□□□□□ -0.7
LSM5-209ENST00000468872 ZFP42Q96MM3 310 aa10.65□□□□□ -0.7
LSM5-209ENST00000468872 TRIM34Q9BYJ4 488 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms