RNA–Protein interactions for RNA: ENST00000468626.2

LYST-207, Transcript of lysosomal trafficking regulator, humanhuman

TSL 1 (best)

Gene LYST, Length 1,140 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYST-207ENST00000468626 NHSL1Q5SYE7 1610 aa17.51■□□□□ 0.39
LYST-207ENST00000468626 ANP32CO43423 234 aa17.51■□□□□ 0.39
LYST-207ENST00000468626 PSME1Q06323 249 aa17.51■□□□□ 0.39
LYST-207ENST00000468626 CNGB1Q14028 1251 aaPredicted RBP17.51■□□□□ 0.39
LYST-207ENST00000468626 BRINP3Q76B58 766 aa17.51■□□□□ 0.39
LYST-207ENST00000468626 TRPM3Q9HCF6 1732 aaPredicted RBP17.51■□□□□ 0.39
LYST-207ENST00000468626 FOXO3O43524 673 aa17.5■□□□□ 0.39
LYST-207ENST00000468626 TOM1O60784 492 aa17.5■□□□□ 0.39
LYST-207ENST00000468626 AMER1Q5JTC6 1135 aaPredicted RBP17.5■□□□□ 0.39
LYST-207ENST00000468626 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.5■□□□□ 0.39
LYST-207ENST00000468626 BRD4O60885 1362 aaPredicted RBP17.5■□□□□ 0.39
LYST-207ENST00000468626 NPC1L1Q9UHC9 1359 aa17.5■□□□□ 0.39
LYST-207ENST00000468626 TTC21BQ7Z4L5 1316 aa17.49■□□□□ 0.39
LYST-207ENST00000468626 SSH2Q76I76 1423 aa17.49■□□□□ 0.39
LYST-207ENST00000468626 CC2D1BQ5T0F9 858 aaKnown RBP17.49■□□□□ 0.39
LYST-207ENST00000468626 NPHP3Q7Z494 1330 aa17.48■□□□□ 0.39
LYST-207ENST00000468626 KRT28Q7Z3Y7 464 aa17.48■□□□□ 0.39
LYST-207ENST00000468626 TTC21AQ8NDW8 1320 aa17.47■□□□□ 0.39
LYST-207ENST00000468626 RNF216Q9NWF9 866 aaPredicted RBP17.47■□□□□ 0.39
LYST-207ENST00000468626 NSD2O96028 1365 aa17.47■□□□□ 0.39
LYST-207ENST00000468626 PIK3C2AO00443 1686 aa17.47■□□□□ 0.39
LYST-207ENST00000468626 UBAP1LF5GYI3 381 aa17.46■□□□□ 0.39
LYST-207ENST00000468626 PAK3O75914 559 aaPredicted RBP17.46■□□□□ 0.39
LYST-207ENST00000468626 XPCQ01831 940 aaPredicted RBP17.46■□□□□ 0.39
LYST-207ENST00000468626 DDX17Q92841 729 aaKnown RBP17.46■□□□□ 0.39
LYST-207ENST00000468626 PXDNQ92626 1479 aa17.45■□□□□ 0.38
LYST-207ENST00000468626 FYB1O15117 783 aa17.45■□□□□ 0.38
LYST-207ENST00000468626 NME9Q86XW9 330 aa17.45■□□□□ 0.38
LYST-207ENST00000468626 PRKRIP1Q9H875 184 aaPredicted RBP17.45■□□□□ 0.38
LYST-207ENST00000468626 USP54Q70EL1 1684 aa17.45■□□□□ 0.38
LYST-207ENST00000468626 ALS2Q96Q42 1657 aa17.45■□□□□ 0.38
LYST-207ENST00000468626 RALBP1Q15311 655 aa17.44■□□□□ 0.38
LYST-207ENST00000468626 GGNBP2Q9H3C7 697 aa17.44■□□□□ 0.38
LYST-207ENST00000468626 MARF1Q9Y4F3 1742 aaKnown RBP17.44■□□□□ 0.38
LYST-207ENST00000468626 AHDC1Q5TGY3 1603 aaPredicted RBP17.43■□□□□ 0.38
LYST-207ENST00000468626 PARD3Q8TEW0 1356 aa17.43■□□□□ 0.38
LYST-207ENST00000468626 PIP4K2BP78356 416 aa17.43■□□□□ 0.38
LYST-207ENST00000468626 MORC1Q86VD1 984 aa17.43■□□□□ 0.38
LYST-207ENST00000468626 PHLPP1O60346 1717 aa17.43■□□□□ 0.38
LYST-207ENST00000468626 SBNO1A3KN83 1393 aa17.42■□□□□ 0.38
LYST-207ENST00000468626 MIER1Q8N108 512 aa17.42■□□□□ 0.38
LYST-207ENST00000468626 MAP2P11137 1827 aaKnown RBP17.42■□□□□ 0.38
LYST-207ENST00000468626 ABTB2Q8N961 1025 aa17.41■□□□□ 0.38
LYST-207ENST00000468626 COG3Q96JB2 828 aa17.41■□□□□ 0.38
LYST-207ENST00000468626 ZRANB1Q9UGI0 708 aa17.41■□□□□ 0.38
LYST-207ENST00000468626 SOS2Q07890 1332 aaPredicted RBP17.4■□□□□ 0.38
LYST-207ENST00000468626 USP31Q70CQ4 1352 aa17.4■□□□□ 0.38
LYST-207ENST00000468626 OVOS2A0A0J9YW53 1432 aa17.39■□□□□ 0.38
LYST-207ENST00000468626 TNS3Q68CZ2 1445 aa17.39■□□□□ 0.38
LYST-207ENST00000468626 OVOS2Q6IE36 1432 aa17.39■□□□□ 0.38
LYST-207ENST00000468626 LMOD2Q6P5Q4 547 aa17.39■□□□□ 0.37
LYST-207ENST00000468626 NLRP6P59044 892 aa17.38■□□□□ 0.37
LYST-207ENST00000468626 NUTM2GQ5VZR2 741 aa17.38■□□□□ 0.37
LYST-207ENST00000468626 SPATA31A3Q5VYP0 1347 aa17.37■□□□□ 0.37
LYST-207ENST00000468626 MYBBP1AQ9BQG0 1328 aaKnown RBP17.37■□□□□ 0.37
LYST-207ENST00000468626 TNNT2P45379 298 aaPredicted RBP17.36■□□□□ 0.37
LYST-207ENST00000468626 NCBP3Q53F19 620 aaKnown RBP17.36■□□□□ 0.37
LYST-207ENST00000468626 NLRP13Q86W25 1043 aa17.36■□□□□ 0.37
LYST-207ENST00000468626 COL16A1Q07092 1604 aaPredicted RBP17.36■□□□□ 0.37
LYST-207ENST00000468626 PPP2R1AP30153 589 aa17.35■□□□□ 0.37
LYST-207ENST00000468626 ARHGEF10O15013 1369 aa17.35■□□□□ 0.37
LYST-207ENST00000468626 PHRF1Q9P1Y6 1649 aaKnown RBP17.35■□□□□ 0.37
LYST-207ENST00000468626 CRYBG1Q9Y4K1 1723 aa17.35■□□□□ 0.37
LYST-207ENST00000468626 LTN1O94822 1766 aa17.33■□□□□ 0.37
LYST-207ENST00000468626 SLIT3O75094 1523 aa17.33■□□□□ 0.37
LYST-207ENST00000468626 ABCA3Q99758 1704 aa17.33■□□□□ 0.36
LYST-207ENST00000468626 MED1Q15648 1581 aaPredicted RBP17.32■□□□□ 0.36
LYST-207ENST00000468626 CCER2I3L3R5 266 aa17.32■□□□□ 0.36
LYST-207ENST00000468626 LRRC59Q96AG4 307 aaKnown RBP17.32■□□□□ 0.36
LYST-207ENST00000468626 AATKQ6ZMQ8 1374 aa17.31■□□□□ 0.36
LYST-207ENST00000468626 DCAF8L1A6NGE4 600 aa17.31■□□□□ 0.36
LYST-207ENST00000468626 PLEKHG5O94827 1062 aa17.31■□□□□ 0.36
LYST-207ENST00000468626 USP19O94966 1318 aa17.3■□□□□ 0.36
LYST-207ENST00000468626 COL22A1Q8NFW1 1626 aaPredicted RBP17.3■□□□□ 0.36
LYST-207ENST00000468626 SOX12O15370 315 aa17.3■□□□□ 0.36
LYST-207ENST00000468626 KCNH5Q8NCM2 988 aa17.3■□□□□ 0.36
LYST-207ENST00000468626 FBLN1P23142 703 aa17.29■□□□□ 0.36
LYST-207ENST00000468626 NFAT5O94916 1531 aa17.29■□□□□ 0.36
LYST-207ENST00000468626 NPM3O75607 178 aaKnown RBP17.28■□□□□ 0.36
LYST-207ENST00000468626 SHPRHQ149N8 1683 aa17.27■□□□□ 0.36
LYST-207ENST00000468626 MTHFSP49914 203 aa17.27■□□□□ 0.36
LYST-207ENST00000468626 RRS1Q15050 365 aaKnown RBP17.27■□□□□ 0.36
LYST-207ENST00000468626 MRS2Q9HD23 443 aa17.27■□□□□ 0.36
LYST-207ENST00000468626 PEAK1Q9H792 1746 aa17.27■□□□□ 0.35
LYST-207ENST00000468626 GCP02774 474 aa17.26■□□□□ 0.35
LYST-207ENST00000468626 CCDC184Q52MB2 194 aa17.26■□□□□ 0.35
LYST-207ENST00000468626 CABLES1Q8TDN4 633 aa17.26■□□□□ 0.35
LYST-207ENST00000468626 RNF39Q9H2S5 420 aa17.26■□□□□ 0.35
LYST-207ENST00000468626 POLKQ9UBT6 870 aa17.26■□□□□ 0.35
LYST-207ENST00000468626 SMG6Q86US8 1419 aaKnown RBP17.26■□□□□ 0.35
LYST-207ENST00000468626 PNPLA6Q8IY17 1366 aa17.26■□□□□ 0.35
LYST-207ENST00000468626 EMILIN1Q9Y6C2 1016 aa17.25■□□□□ 0.35
LYST-207ENST00000468626 PPM1GO15355 546 aaPredicted RBP17.24■□□□□ 0.35
LYST-207ENST00000468626 HAP1P54257 671 aaPredicted RBP17.24■□□□□ 0.35
LYST-207ENST00000468626 CFAP53Q96M91 514 aa17.24■□□□□ 0.35
LYST-207ENST00000468626 RGPD5Q99666 1765 aa17.24■□□□□ 0.35
LYST-207ENST00000468626 CDK12Q9NYV4 1490 aaPredicted RBP17.24■□□□□ 0.35
LYST-207ENST00000468626 MAP3K19Q56UN5 1328 aa17.23■□□□□ 0.35
LYST-207ENST00000468626 ZBTB7CA1YPR0 619 aa17.22■□□□□ 0.35
LYST-207ENST00000468626 AMPHP49418 695 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms