RNA–Protein interactions for RNA: ENST00000468619.5

SHANK2-214, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 2

Gene SHANK2, Length 2,775 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-214ENST00000468619 OFD1O75665 1012 aa16.86■□□□□ 0.29
SHANK2-214ENST00000468619 CEBPAP49715 358 aaPredicted RBP16.86■□□□□ 0.29
SHANK2-214ENST00000468619 STAG3Q9UJ98 1225 aa16.86■□□□□ 0.29
SHANK2-214ENST00000468619 E9PSI1 815 aa16.86■□□□□ 0.29
SHANK2-214ENST00000468619 TMF1P82094 1093 aa16.86■□□□□ 0.29
SHANK2-214ENST00000468619 ZSCAN30Q86W11 494 aa16.86■□□□□ 0.29
SHANK2-214ENST00000468619 HSCBQ8IWL3 235 aa16.86■□□□□ 0.29
SHANK2-214ENST00000468619 R3HCC1Q9Y3T6 440 aaKnown RBP16.86■□□□□ 0.29
SHANK2-214ENST00000468619 KIAA1210Q9ULL0 1709 aa16.85■□□□□ 0.29
SHANK2-214ENST00000468619 PMFBP1Q8TBY8 1022 aa16.85■□□□□ 0.29
SHANK2-214ENST00000468619 TNPO1Q92973 898 aaKnown RBP16.85■□□□□ 0.29
SHANK2-214ENST00000468619 TNNQ9UQP3 1299 aa16.85■□□□□ 0.29
SHANK2-214ENST00000468619 NRXN1Q9ULB1 1477 aa16.85■□□□□ 0.29
SHANK2-214ENST00000468619 MSNP26038 577 aaKnown RBP16.84■□□□□ 0.29
SHANK2-214ENST00000468619 RPGRIP1LQ68CZ1 1315 aa16.84■□□□□ 0.29
SHANK2-214ENST00000468619 AAMPQ13685 434 aa16.84■□□□□ 0.29
SHANK2-214ENST00000468619 C3P01024 1663 aa16.84■□□□□ 0.29
SHANK2-214ENST00000468619 IQGAP1P46940 1657 aa16.84■□□□□ 0.29
SHANK2-214ENST00000468619 NASPP49321 788 aaPredicted RBP16.83■□□□□ 0.28
SHANK2-214ENST00000468619 CCDC173Q0VFZ6 552 aa16.83■□□□□ 0.28
SHANK2-214ENST00000468619 PIK3C2GO75747 1445 aa16.82■□□□□ 0.28
SHANK2-214ENST00000468619 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.82■□□□□ 0.28
SHANK2-214ENST00000468619 RLBP1P12271 317 aa16.82■□□□□ 0.28
SHANK2-214ENST00000468619 TNRQ92752 1358 aa16.81■□□□□ 0.28
SHANK2-214ENST00000468619 BCL2L13Q9BXK5 485 aa16.81■□□□□ 0.28
SHANK2-214ENST00000468619 PRDM10Q9NQV6 1147 aa16.8■□□□□ 0.28
SHANK2-214ENST00000468619 FOXD4L1Q9NU39 408 aa16.8■□□□□ 0.28
SHANK2-214ENST00000468619 A2ML1A8K2U0 1454 aa16.8■□□□□ 0.28
SHANK2-214ENST00000468619 VGFO15240 615 aaPredicted RBP16.8■□□□□ 0.28
SHANK2-214ENST00000468619 AMER1Q5JTC6 1135 aaPredicted RBP16.8■□□□□ 0.28
SHANK2-214ENST00000468619 ANP32BQ92688 251 aaKnown RBP16.79■□□□□ 0.28
SHANK2-214ENST00000468619 GBP4Q96PP9 640 aa16.79■□□□□ 0.28
SHANK2-214ENST00000468619 PPP1R9BQ96SB3 815 aa16.79■□□□□ 0.28
SHANK2-214ENST00000468619 ZHX1Q9UKY1 873 aaPredicted RBP16.79■□□□□ 0.28
SHANK2-214ENST00000468619 SCAF11Q99590 1463 aaKnown RBP16.79■□□□□ 0.28
SHANK2-214ENST00000468619 TMEM132EQ6IEE7 984 aa16.78■□□□□ 0.28
SHANK2-214ENST00000468619 RWDD1Q9H446 243 aaPredicted RBP16.78■□□□□ 0.28
SHANK2-214ENST00000468619 RIMS1Q86UR5 1692 aaKnown RBP16.78■□□□□ 0.28
SHANK2-214ENST00000468619 DDIT3P35638 169 aa16.77■□□□□ 0.28
SHANK2-214ENST00000468619 MAP7D2Q96T17 732 aa16.77■□□□□ 0.28
SHANK2-214ENST00000468619 UQCRHLA0A096LP55 91 aa16.77■□□□□ 0.28
SHANK2-214ENST00000468619 UQCRHP07919 91 aa16.77■□□□□ 0.28
SHANK2-214ENST00000468619 NEUROD2Q15784 382 aa16.77■□□□□ 0.28
SHANK2-214ENST00000468619 C14orf93Q9H972 538 aaKnown RBP16.77■□□□□ 0.28
SHANK2-214ENST00000468619 XPCQ01831 940 aaPredicted RBP16.77■□□□□ 0.27
SHANK2-214ENST00000468619 SKOR2Q2VWA4 1001 aaPredicted RBP16.77■□□□□ 0.27
SHANK2-214ENST00000468619 HSP90AB1P08238 724 aaKnown RBP16.76■□□□□ 0.27
SHANK2-214ENST00000468619 NINLQ9Y2I6 1382 aa16.75■□□□□ 0.27
SHANK2-214ENST00000468619 UBR1Q8IWV7 1749 aa16.75■□□□□ 0.27
SHANK2-214ENST00000468619 TERF1P54274 439 aa16.75■□□□□ 0.27
SHANK2-214ENST00000468619 SETBP1Q9Y6X0 1596 aa16.74■□□□□ 0.27
SHANK2-214ENST00000468619 RARSP54136 660 aaKnown RBP16.74■□□□□ 0.27
SHANK2-214ENST00000468619 RAB3GAP1Q15042 981 aa16.74■□□□□ 0.27
SHANK2-214ENST00000468619 ADGRB1O14514 1584 aa16.74■□□□□ 0.27
SHANK2-214ENST00000468619 RIMS2Q9UQ26 1411 aa16.74■□□□□ 0.27
SHANK2-214ENST00000468619 ZFYVE9O95405 1425 aa16.74■□□□□ 0.27
SHANK2-214ENST00000468619 WWC1Q8IX03 1113 aa16.73■□□□□ 0.27
SHANK2-214ENST00000468619 SMAP1Q8IYB5 467 aaPredicted RBP16.73■□□□□ 0.27
SHANK2-214ENST00000468619 TRAK1Q9UPV9 953 aa16.73■□□□□ 0.27
SHANK2-214ENST00000468619 FGD1P98174 961 aa16.72■□□□□ 0.27
SHANK2-214ENST00000468619 RRP7AQ9Y3A4 280 aaKnown RBP16.72■□□□□ 0.27
SHANK2-214ENST00000468619 NCOA3Q9Y6Q9 1424 aa16.72■□□□□ 0.27
SHANK2-214ENST00000468619 SMC5Q8IY18 1101 aa16.72■□□□□ 0.27
SHANK2-214ENST00000468619 DDX49Q9Y6V7 483 aaKnown RBP16.72■□□□□ 0.27
SHANK2-214ENST00000468619 ADAMTSL3P82987 1691 aa16.71■□□□□ 0.27
SHANK2-214ENST00000468619 ASXL1Q8IXJ9 1541 aa16.7■□□□□ 0.26
SHANK2-214ENST00000468619 SSFA2P28290 1259 aa16.7■□□□□ 0.26
SHANK2-214ENST00000468619 CIZ1Q9ULV3 898 aaPredicted RBP16.69■□□□□ 0.26
SHANK2-214ENST00000468619 KDM5AP29375 1690 aaKnown RBP16.69■□□□□ 0.26
SHANK2-214ENST00000468619 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.69■□□□□ 0.26
SHANK2-214ENST00000468619 ALKQ9UM73 1620 aa16.68■□□□□ 0.26
SHANK2-214ENST00000468619 NCLP19338 710 aaKnown RBP16.68■□□□□ 0.26
SHANK2-214ENST00000468619 NOL7Q9UMY1 257 aaKnown RBP16.68■□□□□ 0.26
SHANK2-214ENST00000468619 CD2BP2O95400 341 aaKnown RBP16.68■□□□□ 0.26
SHANK2-214ENST00000468619 SNX21Q969T3 373 aa16.68■□□□□ 0.26
SHANK2-214ENST00000468619 STK26Q9P289 416 aa16.68■□□□□ 0.26
SHANK2-214ENST00000468619 MYO3AQ8NEV4 1616 aa16.68■□□□□ 0.26
SHANK2-214ENST00000468619 ARHGEF28Q8N1W1 1705 aaKnown RBP16.67■□□□□ 0.26
SHANK2-214ENST00000468619 QRICH2Q9H0J4 1663 aa16.67■□□□□ 0.26
SHANK2-214ENST00000468619 PTMSP20962 102 aa16.66■□□□□ 0.26
SHANK2-214ENST00000468619 TMEM2Q9UHN6 1383 aa16.66■□□□□ 0.26
SHANK2-214ENST00000468619 ZBTB7CA1YPR0 619 aa16.66■□□□□ 0.26
SHANK2-214ENST00000468619 GOLGA6L22H0YM25 854 aa16.66■□□□□ 0.26
SHANK2-214ENST00000468619 ZNF500O60304 480 aaPredicted RBP16.66■□□□□ 0.26
SHANK2-214ENST00000468619 NRXN3Q9Y4C0 1643 aa16.65■□□□□ 0.26
SHANK2-214ENST00000468619 DYNC1I1O14576 645 aa16.65■□□□□ 0.26
SHANK2-214ENST00000468619 RBM25P49756 843 aaKnown RBP16.65■□□□□ 0.26
SHANK2-214ENST00000468619 KLHL40Q2TBA0 621 aa16.65■□□□□ 0.26
SHANK2-214ENST00000468619 MVPQ14764 893 aaKnown RBP16.65■□□□□ 0.26
SHANK2-214ENST00000468619 CAVIN1Q6NZI2 390 aaKnown RBP16.64■□□□□ 0.25
SHANK2-214ENST00000468619 MTERF4Q7Z6M4 381 aaKnown RBP16.64■□□□□ 0.25
SHANK2-214ENST00000468619 PTPRMP28827 1452 aa16.64■□□□□ 0.25
SHANK2-214ENST00000468619 SETD1AO15047 1707 aaKnown RBP16.64■□□□□ 0.25
SHANK2-214ENST00000468619 FTSJ3Q8IY81 847 aaKnown RBP16.64■□□□□ 0.25
SHANK2-214ENST00000468619 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.64■□□□□ 0.25
SHANK2-214ENST00000468619 RBSNQ9H1K0 784 aa16.64■□□□□ 0.25
SHANK2-214ENST00000468619 SAFB2Q14151 953 aaKnown RBP eCLIP16.63■□□□□ 0.25
SHANK2-214ENST00000468619 RBM42Q9BTD8 480 aaKnown RBP16.63■□□□□ 0.25
SHANK2-214ENST00000468619 BAG4O95429 457 aaKnown RBP16.62■□□□□ 0.25
SHANK2-214ENST00000468619 HS1BP3Q53T59 392 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms