RNA–Protein interactions for RNA: ENST00000468619.5

SHANK2-214, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 2

Gene SHANK2, Length 2,775 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-214ENST00000468619 OFD1O75665 1012 aa16.86■□□□□ 0.29
SHANK2-214ENST00000468619 CEBPAP49715 358 aaPredicted RBP16.86■□□□□ 0.29
SHANK2-214ENST00000468619 STAG3Q9UJ98 1225 aa16.86■□□□□ 0.29
SHANK2-214ENST00000468619 E9PSI1 815 aa16.86■□□□□ 0.29
SHANK2-214ENST00000468619 TMF1P82094 1093 aa16.86■□□□□ 0.29
SHANK2-214ENST00000468619 ZSCAN30Q86W11 494 aa16.86■□□□□ 0.29
SHANK2-214ENST00000468619 HSCBQ8IWL3 235 aa16.86■□□□□ 0.29
SHANK2-214ENST00000468619 R3HCC1Q9Y3T6 440 aaKnown RBP16.86■□□□□ 0.29
SHANK2-214ENST00000468619 KIAA1210Q9ULL0 1709 aa16.85■□□□□ 0.29
SHANK2-214ENST00000468619 PMFBP1Q8TBY8 1022 aa16.85■□□□□ 0.29
SHANK2-214ENST00000468619 TNPO1Q92973 898 aaKnown RBP16.85■□□□□ 0.29
SHANK2-214ENST00000468619 TNNQ9UQP3 1299 aa16.85■□□□□ 0.29
SHANK2-214ENST00000468619 NRXN1Q9ULB1 1477 aa16.85■□□□□ 0.29
SHANK2-214ENST00000468619 MSNP26038 577 aaKnown RBP16.84■□□□□ 0.29
SHANK2-214ENST00000468619 RPGRIP1LQ68CZ1 1315 aa16.84■□□□□ 0.29
SHANK2-214ENST00000468619 AAMPQ13685 434 aa16.84■□□□□ 0.29
SHANK2-214ENST00000468619 C3P01024 1663 aa16.84■□□□□ 0.29
SHANK2-214ENST00000468619 IQGAP1P46940 1657 aa16.84■□□□□ 0.29
SHANK2-214ENST00000468619 NASPP49321 788 aaPredicted RBP16.83■□□□□ 0.28
SHANK2-214ENST00000468619 CCDC173Q0VFZ6 552 aa16.83■□□□□ 0.28
SHANK2-214ENST00000468619 PIK3C2GO75747 1445 aa16.82■□□□□ 0.28
SHANK2-214ENST00000468619 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.82■□□□□ 0.28
SHANK2-214ENST00000468619 RLBP1P12271 317 aa16.82■□□□□ 0.28
SHANK2-214ENST00000468619 TNRQ92752 1358 aa16.81■□□□□ 0.28
SHANK2-214ENST00000468619 BCL2L13Q9BXK5 485 aa16.81■□□□□ 0.28
SHANK2-214ENST00000468619 PRDM10Q9NQV6 1147 aa16.8■□□□□ 0.28
SHANK2-214ENST00000468619 FOXD4L1Q9NU39 408 aa16.8■□□□□ 0.28
SHANK2-214ENST00000468619 A2ML1A8K2U0 1454 aa16.8■□□□□ 0.28
SHANK2-214ENST00000468619 VGFO15240 615 aaPredicted RBP16.8■□□□□ 0.28
SHANK2-214ENST00000468619 AMER1Q5JTC6 1135 aaPredicted RBP16.8■□□□□ 0.28
SHANK2-214ENST00000468619 ANP32BQ92688 251 aaKnown RBP16.79■□□□□ 0.28
SHANK2-214ENST00000468619 GBP4Q96PP9 640 aa16.79■□□□□ 0.28
SHANK2-214ENST00000468619 PPP1R9BQ96SB3 815 aa16.79■□□□□ 0.28
SHANK2-214ENST00000468619 ZHX1Q9UKY1 873 aaPredicted RBP16.79■□□□□ 0.28
SHANK2-214ENST00000468619 SCAF11Q99590 1463 aaKnown RBP16.79■□□□□ 0.28
SHANK2-214ENST00000468619 TMEM132EQ6IEE7 984 aa16.78■□□□□ 0.28
SHANK2-214ENST00000468619 RWDD1Q9H446 243 aaPredicted RBP16.78■□□□□ 0.28
SHANK2-214ENST00000468619 RIMS1Q86UR5 1692 aaKnown RBP16.78■□□□□ 0.28
SHANK2-214ENST00000468619 DDIT3P35638 169 aa16.77■□□□□ 0.28
SHANK2-214ENST00000468619 MAP7D2Q96T17 732 aa16.77■□□□□ 0.28
SHANK2-214ENST00000468619 UQCRHLA0A096LP55 91 aa16.77■□□□□ 0.28
SHANK2-214ENST00000468619 UQCRHP07919 91 aa16.77■□□□□ 0.28
SHANK2-214ENST00000468619 NEUROD2Q15784 382 aa16.77■□□□□ 0.28
SHANK2-214ENST00000468619 C14orf93Q9H972 538 aaKnown RBP16.77■□□□□ 0.28
SHANK2-214ENST00000468619 XPCQ01831 940 aaPredicted RBP16.77■□□□□ 0.27
SHANK2-214ENST00000468619 SKOR2Q2VWA4 1001 aaPredicted RBP16.77■□□□□ 0.27
SHANK2-214ENST00000468619 HSP90AB1P08238 724 aaKnown RBP16.76■□□□□ 0.27
SHANK2-214ENST00000468619 NINLQ9Y2I6 1382 aa16.75■□□□□ 0.27
SHANK2-214ENST00000468619 UBR1Q8IWV7 1749 aa16.75■□□□□ 0.27
SHANK2-214ENST00000468619 TERF1P54274 439 aa16.75■□□□□ 0.27
SHANK2-214ENST00000468619 SETBP1Q9Y6X0 1596 aa16.74■□□□□ 0.27
SHANK2-214ENST00000468619 RARSP54136 660 aaKnown RBP16.74■□□□□ 0.27
SHANK2-214ENST00000468619 RAB3GAP1Q15042 981 aa16.74■□□□□ 0.27
SHANK2-214ENST00000468619 ADGRB1O14514 1584 aa16.74■□□□□ 0.27
SHANK2-214ENST00000468619 RIMS2Q9UQ26 1411 aa16.74■□□□□ 0.27
SHANK2-214ENST00000468619 ZFYVE9O95405 1425 aa16.74■□□□□ 0.27
SHANK2-214ENST00000468619 WWC1Q8IX03 1113 aa16.73■□□□□ 0.27
SHANK2-214ENST00000468619 SMAP1Q8IYB5 467 aaPredicted RBP16.73■□□□□ 0.27
SHANK2-214ENST00000468619 TRAK1Q9UPV9 953 aa16.73■□□□□ 0.27
SHANK2-214ENST00000468619 FGD1P98174 961 aa16.72■□□□□ 0.27
SHANK2-214ENST00000468619 RRP7AQ9Y3A4 280 aaKnown RBP16.72■□□□□ 0.27
SHANK2-214ENST00000468619 NCOA3Q9Y6Q9 1424 aa16.72■□□□□ 0.27
SHANK2-214ENST00000468619 SMC5Q8IY18 1101 aa16.72■□□□□ 0.27
SHANK2-214ENST00000468619 DDX49Q9Y6V7 483 aaKnown RBP16.72■□□□□ 0.27
SHANK2-214ENST00000468619 ADAMTSL3P82987 1691 aa16.71■□□□□ 0.27
SHANK2-214ENST00000468619 ASXL1Q8IXJ9 1541 aa16.7■□□□□ 0.26
SHANK2-214ENST00000468619 SSFA2P28290 1259 aa16.7■□□□□ 0.26
SHANK2-214ENST00000468619 CIZ1Q9ULV3 898 aaPredicted RBP16.69■□□□□ 0.26
SHANK2-214ENST00000468619 KDM5AP29375 1690 aaKnown RBP16.69■□□□□ 0.26
SHANK2-214ENST00000468619 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.69■□□□□ 0.26
SHANK2-214ENST00000468619 ALKQ9UM73 1620 aa16.68■□□□□ 0.26
SHANK2-214ENST00000468619 NCLP19338 710 aaKnown RBP16.68■□□□□ 0.26
SHANK2-214ENST00000468619 NOL7Q9UMY1 257 aaKnown RBP16.68■□□□□ 0.26
SHANK2-214ENST00000468619 CD2BP2O95400 341 aaKnown RBP16.68■□□□□ 0.26
SHANK2-214ENST00000468619 SNX21Q969T3 373 aa16.68■□□□□ 0.26
SHANK2-214ENST00000468619 STK26Q9P289 416 aa16.68■□□□□ 0.26
SHANK2-214ENST00000468619 MYO3AQ8NEV4 1616 aa16.68■□□□□ 0.26
SHANK2-214ENST00000468619 ARHGEF28Q8N1W1 1705 aaKnown RBP16.67■□□□□ 0.26
SHANK2-214ENST00000468619 QRICH2Q9H0J4 1663 aa16.67■□□□□ 0.26
SHANK2-214ENST00000468619 PTMSP20962 102 aa16.66■□□□□ 0.26
SHANK2-214ENST00000468619 TMEM2Q9UHN6 1383 aa16.66■□□□□ 0.26
SHANK2-214ENST00000468619 ZBTB7CA1YPR0 619 aa16.66■□□□□ 0.26
SHANK2-214ENST00000468619 GOLGA6L22H0YM25 854 aa16.66■□□□□ 0.26
SHANK2-214ENST00000468619 ZNF500O60304 480 aaPredicted RBP16.66■□□□□ 0.26
SHANK2-214ENST00000468619 NRXN3Q9Y4C0 1643 aa16.65■□□□□ 0.26
SHANK2-214ENST00000468619 DYNC1I1O14576 645 aa16.65■□□□□ 0.26
SHANK2-214ENST00000468619 RBM25P49756 843 aaKnown RBP16.65■□□□□ 0.26
SHANK2-214ENST00000468619 KLHL40Q2TBA0 621 aa16.65■□□□□ 0.26
SHANK2-214ENST00000468619 MVPQ14764 893 aaKnown RBP16.65■□□□□ 0.26
SHANK2-214ENST00000468619 CAVIN1Q6NZI2 390 aaKnown RBP16.64■□□□□ 0.25
SHANK2-214ENST00000468619 MTERF4Q7Z6M4 381 aaKnown RBP16.64■□□□□ 0.25
SHANK2-214ENST00000468619 PTPRMP28827 1452 aa16.64■□□□□ 0.25
SHANK2-214ENST00000468619 SETD1AO15047 1707 aaKnown RBP16.64■□□□□ 0.25
SHANK2-214ENST00000468619 FTSJ3Q8IY81 847 aaKnown RBP16.64■□□□□ 0.25
SHANK2-214ENST00000468619 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.64■□□□□ 0.25
SHANK2-214ENST00000468619 RBSNQ9H1K0 784 aa16.64■□□□□ 0.25
SHANK2-214ENST00000468619 SAFB2Q14151 953 aaKnown RBP eCLIP16.63■□□□□ 0.25
SHANK2-214ENST00000468619 RBM42Q9BTD8 480 aaKnown RBP16.63■□□□□ 0.25
SHANK2-214ENST00000468619 BAG4O95429 457 aaKnown RBP16.62■□□□□ 0.25
SHANK2-214ENST00000468619 HS1BP3Q53T59 392 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms