RNA–Protein interactions for RNA: ENST00000468459.5

COL16A1-208, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 620 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-208ENST00000468459 TIMELESSQ9UNS1 1208 aa21.02■□□□□ 0.96
COL16A1-208ENST00000468459 SRCAPQ6ZRS2 3230 aa21.02■□□□□ 0.95
COL16A1-208ENST00000468459 TRPM3Q9HCF6 1732 aaPredicted RBP21.01■□□□□ 0.95
COL16A1-208ENST00000468459 ARHGEF28Q8N1W1 1705 aaKnown RBP21.01■□□□□ 0.95
COL16A1-208ENST00000468459 CCDC61Q9Y6R9 512 aa20.98■□□□□ 0.95
COL16A1-208ENST00000468459 POLR3AO14802 1390 aaPredicted RBP20.97■□□□□ 0.95
COL16A1-208ENST00000468459 ALS2Q96Q42 1657 aa20.97■□□□□ 0.95
COL16A1-208ENST00000468459 PLEKHG3A1L390 1219 aa20.97■□□□□ 0.95
COL16A1-208ENST00000468459 CCDC125Q86Z20 511 aa20.97■□□□□ 0.95
COL16A1-208ENST00000468459 SEPT12Q8IYM1 358 aa20.97■□□□□ 0.95
COL16A1-208ENST00000468459 ABCA3Q99758 1704 aa20.96■□□□□ 0.95
COL16A1-208ENST00000468459 BTG4Q9NY30 223 aa20.95■□□□□ 0.94
COL16A1-208ENST00000468459 PAK3O75914 559 aaPredicted RBP20.94■□□□□ 0.94
COL16A1-208ENST00000468459 ACEP12821 1306 aa20.94■□□□□ 0.94
COL16A1-208ENST00000468459 CARD11Q9BXL7 1154 aa20.93■□□□□ 0.94
COL16A1-208ENST00000468459 NWD2Q9ULI1 1742 aa20.92■□□□□ 0.94
COL16A1-208ENST00000468459 CENPJQ9HC77 1338 aaPredicted RBP20.92■□□□□ 0.94
COL16A1-208ENST00000468459 PLCH1Q4KWH8 1693 aa20.91■□□□□ 0.94
COL16A1-208ENST00000468459 CCDC9Q9Y3X0 531 aaKnown RBP20.91■□□□□ 0.94
COL16A1-208ENST00000468459 BLMP54132 1417 aaPredicted RBP20.89■□□□□ 0.94
COL16A1-208ENST00000468459 SPATA31A5Q5VU36 1347 aa20.88■□□□□ 0.93
COL16A1-208ENST00000468459 SPATA31A7Q8IWB4 1347 aa20.88■□□□□ 0.93
COL16A1-208ENST00000468459 KRT27Q7Z3Y8 459 aa20.88■□□□□ 0.93
COL16A1-208ENST00000468459 CABP2Q9NPB3 220 aa20.88■□□□□ 0.93
COL16A1-208ENST00000468459 PRDM11Q9NQV5 511 aa20.88■□□□□ 0.93
COL16A1-208ENST00000468459 NRAPQ86VF7 1730 aa20.87■□□□□ 0.93
COL16A1-208ENST00000468459 CRYBG1Q9Y4K1 1723 aa20.87■□□□□ 0.93
COL16A1-208ENST00000468459 KIAA0232Q92628 1395 aa20.87■□□□□ 0.93
COL16A1-208ENST00000468459 FAM98CQ17RN3 349 aaKnown RBP20.87■□□□□ 0.93
COL16A1-208ENST00000468459 TOPAZ1Q8N9V7 1692 aa20.86■□□□□ 0.93
COL16A1-208ENST00000468459 SRPK2P78362 688 aaKnown RBP20.86■□□□□ 0.93
COL16A1-208ENST00000468459 NUTM2GQ5VZR2 741 aa20.86■□□□□ 0.93
COL16A1-208ENST00000468459 COL14A1Q05707 1796 aaKnown RBP20.86■□□□□ 0.93
COL16A1-208ENST00000468459 ITSN1Q15811 1721 aa20.85■□□□□ 0.93
COL16A1-208ENST00000468459 QRICH2Q9H0J4 1663 aa20.85■□□□□ 0.93
COL16A1-208ENST00000468459 CHRNA2Q15822 529 aa20.84■□□□□ 0.93
COL16A1-208ENST00000468459 PPIP5K1Q6PFW1 1433 aa20.84■□□□□ 0.93
COL16A1-208ENST00000468459 USP19O94966 1318 aa20.83■□□□□ 0.93
COL16A1-208ENST00000468459 ZC3H6P61129 1189 aaKnown RBP20.83■□□□□ 0.93
COL16A1-208ENST00000468459 DEFB132Q7Z7B7 95 aa20.83■□□□□ 0.93
COL16A1-208ENST00000468459 ABTB2Q8N961 1025 aa20.83■□□□□ 0.93
COL16A1-208ENST00000468459 CABP1Q9NZU7 370 aa20.82■□□□□ 0.92
COL16A1-208ENST00000468459 ZRANB1Q9UGI0 708 aa20.82■□□□□ 0.92
COL16A1-208ENST00000468459 USP47Q96K76 1375 aa20.82■□□□□ 0.92
COL16A1-208ENST00000468459 SPATA31A1Q5TZJ5 1347 aa20.81■□□□□ 0.92
COL16A1-208ENST00000468459 BRWD3Q6RI45 1802 aa20.81■□□□□ 0.92
COL16A1-208ENST00000468459 BRD4O60885 1362 aaPredicted RBP20.8■□□□□ 0.92
COL16A1-208ENST00000468459 CPDO75976 1380 aa20.8■□□□□ 0.92
COL16A1-208ENST00000468459 SSH2Q76I76 1423 aa20.78■□□□□ 0.92
COL16A1-208ENST00000468459 A0A0G2JS52 829 aa20.78■□□□□ 0.92
COL16A1-208ENST00000468459 GCP02774 474 aa20.78■□□□□ 0.92
COL16A1-208ENST00000468459 MYT1Q01538 1121 aa20.78■□□□□ 0.92
COL16A1-208ENST00000468459 NLRP13Q86W25 1043 aa20.78■□□□□ 0.92
COL16A1-208ENST00000468459 ST20-MTHFSA0A0A6YYL1 179 aa20.77■□□□□ 0.92
COL16A1-208ENST00000468459 PHRF1Q9P1Y6 1649 aaKnown RBP20.77■□□□□ 0.92
COL16A1-208ENST00000468459 USP6P35125 1406 aa20.77■□□□□ 0.91
COL16A1-208ENST00000468459 EVC2Q86UK5 1308 aa20.77■□□□□ 0.91
COL16A1-208ENST00000468459 STRN4Q9NRL3 753 aa20.76■□□□□ 0.91
COL16A1-208ENST00000468459 NRKQ7Z2Y5 1582 aa20.76■□□□□ 0.91
COL16A1-208ENST00000468459 THSD7AQ9UPZ6 1657 aa20.75■□□□□ 0.91
COL16A1-208ENST00000468459 CAMTA1Q9Y6Y1 1673 aa20.75■□□□□ 0.91
COL16A1-208ENST00000468459 SF3B2Q13435 895 aaKnown RBP20.75■□□□□ 0.91
COL16A1-208ENST00000468459 FAM182BQ5T319 152 aa20.75■□□□□ 0.91
COL16A1-208ENST00000468459 SBNO2Q9Y2G9 1366 aa20.73■□□□□ 0.91
COL16A1-208ENST00000468459 LARP1Q6PKG0 1096 aaKnown RBP20.73■□□□□ 0.91
COL16A1-208ENST00000468459 BARGINQ6ZT62 677 aa20.73■□□□□ 0.91
COL16A1-208ENST00000468459 TESK2Q96S53 571 aa20.73■□□□□ 0.91
COL16A1-208ENST00000468459 EVA1CP58658 441 aa20.71■□□□□ 0.91
COL16A1-208ENST00000468459 NLRP6P59044 892 aa20.71■□□□□ 0.91
COL16A1-208ENST00000468459 USP35Q9P2H5 1018 aa20.7■□□□□ 0.9
COL16A1-208ENST00000468459 LMO7Q8WWI1 1683 aa20.7■□□□□ 0.9
COL16A1-208ENST00000468459 HSPA5P11021 654 aaKnown RBP20.69■□□□□ 0.9
COL16A1-208ENST00000468459 BAG6P46379 1132 aa20.69■□□□□ 0.9
COL16A1-208ENST00000468459 ZNF692Q9BU19 519 aaPredicted RBP20.69■□□□□ 0.9
COL16A1-208ENST00000468459 SLIT3O75094 1523 aa20.68■□□□□ 0.9
COL16A1-208ENST00000468459 TCP11L2Q8N4U5 519 aa20.68■□□□□ 0.9
COL16A1-208ENST00000468459 TTC21BQ7Z4L5 1316 aa20.68■□□□□ 0.9
COL16A1-208ENST00000468459 CPSF1Q10570 1443 aaKnown RBP20.68■□□□□ 0.9
COL16A1-208ENST00000468459 EIF4G2P78344 907 aaKnown RBP eCLIP20.67■□□□□ 0.9
COL16A1-208ENST00000468459 AATKQ6ZMQ8 1374 aa20.67■□□□□ 0.9
COL16A1-208ENST00000468459 DISP2A7MBM2 1401 aa20.67■□□□□ 0.9
COL16A1-208ENST00000468459 COL5A2P05997 1499 aaPredicted RBP20.67■□□□□ 0.9
COL16A1-208ENST00000468459 EN1Q05925 392 aaPredicted RBP20.66■□□□□ 0.9
COL16A1-208ENST00000468459 FAM196AQ6ZSG2 479 aa20.66■□□□□ 0.9
COL16A1-208ENST00000468459 THRAP3Q9Y2W1 955 aaKnown RBP20.66■□□□□ 0.9
COL16A1-208ENST00000468459 ARHGEF25Q86VW2 580 aa20.63■□□□□ 0.89
COL16A1-208ENST00000468459 AXIN2Q9Y2T1 843 aa20.63■□□□□ 0.89
COL16A1-208ENST00000468459 TTC21AQ8NDW8 1320 aa20.62■□□□□ 0.89
COL16A1-208ENST00000468459 TRIM37O94972 964 aa20.62■□□□□ 0.89
COL16A1-208ENST00000468459 CRB1P82279 1406 aa20.61■□□□□ 0.89
COL16A1-208ENST00000468459 PIK3C2AO00443 1686 aa20.61■□□□□ 0.89
COL16A1-208ENST00000468459 PDE3BQ13370 1112 aa20.61■□□□□ 0.89
COL16A1-208ENST00000468459 CAMKK2Q96RR4 588 aa20.61■□□□□ 0.89
COL16A1-208ENST00000468459 KCNH5Q8NCM2 988 aa20.6■□□□□ 0.89
COL16A1-208ENST00000468459 CD163L1Q9NR16 1453 aa20.59■□□□□ 0.89
COL16A1-208ENST00000468459 EZH2Q15910 746 aaKnown RBP20.59■□□□□ 0.89
COL16A1-208ENST00000468459 KTN1Q86UP2 1357 aaKnown RBP20.59■□□□□ 0.89
COL16A1-208ENST00000468459 ZBTB7CA1YPR0 619 aa20.58■□□□□ 0.89
COL16A1-208ENST00000468459 TMF1P82094 1093 aa20.58■□□□□ 0.89
COL16A1-208ENST00000468459 PSDA5PKW4 1024 aaPredicted RBP20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms