RNA–Protein interactions for RNA: ENST00000468286.5

SGIP1-207, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 846 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-207ENST00000468286 TIMP2P16035 220 aa13.31□□□□□ -0.28
SGIP1-207ENST00000468286 SSTR3P32745 418 aaPredicted RBP13.31□□□□□ -0.28
SGIP1-207ENST00000468286 MTMR2Q13614 643 aa13.3□□□□□ -0.28
SGIP1-207ENST00000468286 KLF16Q9BXK1 252 aaPredicted RBP13.3□□□□□ -0.28
SGIP1-207ENST00000468286 NDUFV2P19404 249 aa13.29□□□□□ -0.28
SGIP1-207ENST00000468286 MOXD2PA6NHM9 499 aa13.28□□□□□ -0.28
SGIP1-207ENST00000468286 HAP1P54257 671 aaPredicted RBP13.28□□□□□ -0.28
SGIP1-207ENST00000468286 WDR4P57081 412 aaKnown RBP13.28□□□□□ -0.28
SGIP1-207ENST00000468286 PURBQ96QR8 312 aaKnown RBP13.28□□□□□ -0.28
SGIP1-207ENST00000468286 GJA5P36382 358 aa13.26□□□□□ -0.29
SGIP1-207ENST00000468286 FAM174AQ8TBP5 190 aa13.26□□□□□ -0.29
SGIP1-207ENST00000468286 CDK15Q96Q40 435 aa13.26□□□□□ -0.29
SGIP1-207ENST00000468286 LOC100996750A0A140TA64 210 aa13.23□□□□□ -0.29
SGIP1-207ENST00000468286 LYPD8Q6UX82 237 aa13.23□□□□□ -0.29
SGIP1-207ENST00000468286 KRTAP4-6Q9BYQ5 205 aa13.23□□□□□ -0.29
SGIP1-207ENST00000468286 AMHR2Q16671 573 aa13.2□□□□□ -0.3
SGIP1-207ENST00000468286 SOBPA7XYQ1 873 aa13.19□□□□□ -0.3
SGIP1-207ENST00000468286 NR5A1Q13285 461 aa13.19□□□□□ -0.3
SGIP1-207ENST00000468286 CTHP32929 405 aa13.18□□□□□ -0.3
SGIP1-207ENST00000468286 TTLL12Q14166 644 aaPredicted RBP13.18□□□□□ -0.3
SGIP1-207ENST00000468286 ZIC2O95409 532 aaPredicted RBP13.17□□□□□ -0.3
SGIP1-207ENST00000468286 DIXDC1Q155Q3 683 aa13.17□□□□□ -0.3
SGIP1-207ENST00000468286 F12P00748 615 aaPredicted RBP13.16□□□□□ -0.3
SGIP1-207ENST00000468286 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.16□□□□□ -0.3
SGIP1-207ENST00000468286 FOXJ1Q92949 421 aa13.16□□□□□ -0.3
SGIP1-207ENST00000468286 MAN1A2O60476 641 aa13.15□□□□□ -0.3
SGIP1-207ENST00000468286 RSBN1LQ6PCB5 846 aaPredicted RBP13.15□□□□□ -0.3
SGIP1-207ENST00000468286 GIGYF2Q6Y7W6 1299 aaKnown RBP13.15□□□□□ -0.3
SGIP1-207ENST00000468286 ITPKCQ96DU7 683 aa13.15□□□□□ -0.3
SGIP1-207ENST00000468286 BEGAINQ9BUH8 593 aa13.14□□□□□ -0.31
SGIP1-207ENST00000468286 ZFAND3Q9H8U3 227 aa13.14□□□□□ -0.31
SGIP1-207ENST00000468286 CFAP99D6REC4 459 aa13.13□□□□□ -0.31
SGIP1-207ENST00000468286 KCNMA1Q12791 1236 aa13.13□□□□□ -0.31
SGIP1-207ENST00000468286 TBC1D2Q9BYX2 928 aa13.13□□□□□ -0.31
SGIP1-207ENST00000468286 NR3C2P08235 984 aa13.12□□□□□ -0.31
SGIP1-207ENST00000468286 GRM5P41594 1212 aa13.12□□□□□ -0.31
SGIP1-207ENST00000468286 ARID5BQ14865 1188 aa13.12□□□□□ -0.31
SGIP1-207ENST00000468286 BARGINQ6ZT62 677 aa13.12□□□□□ -0.31
SGIP1-207ENST00000468286 VSIG10Q8N0Z9 540 aa13.12□□□□□ -0.31
SGIP1-207ENST00000468286 MAP10Q9P2G4 905 aa13.12□□□□□ -0.31
SGIP1-207ENST00000468286 PPFIA3O75145 1194 aa13.11□□□□□ -0.31
SGIP1-207ENST00000468286 ZBTB3Q9H5J0 574 aa13.11□□□□□ -0.31
SGIP1-207ENST00000468286 SPTLC1O15269 473 aa13.1□□□□□ -0.31
SGIP1-207ENST00000468286 UPP2O95045 317 aa13.1□□□□□ -0.31
SGIP1-207ENST00000468286 C6orf118Q5T5N4 469 aa13.1□□□□□ -0.31
SGIP1-207ENST00000468286 PRPF38BQ5VTL8 546 aaKnown RBP13.1□□□□□ -0.31
SGIP1-207ENST00000468286 BPHLQ86WA6 291 aaPredicted RBP13.1□□□□□ -0.31
SGIP1-207ENST00000468286 MEIOBQ8N635 442 aa13.1□□□□□ -0.31
SGIP1-207ENST00000468286 C4orf48Q5BLP8 95 aa13.09□□□□□ -0.31
SGIP1-207ENST00000468286 LINC00528Q8N1L1 170 aa13.09□□□□□ -0.31
SGIP1-207ENST00000468286 PCDHB15Q9Y5E8 787 aa13.09□□□□□ -0.31
SGIP1-207ENST00000468286 ZMYND10O75800 440 aa13.08□□□□□ -0.32
SGIP1-207ENST00000468286 HRCP23327 699 aa13.08□□□□□ -0.32
SGIP1-207ENST00000468286 BMP2P12643 396 aa13.07□□□□□ -0.32
SGIP1-207ENST00000468286 SOS2Q07890 1332 aaPredicted RBP13.07□□□□□ -0.32
SGIP1-207ENST00000468286 GSK3AP49840 483 aa13.06□□□□□ -0.32
SGIP1-207ENST00000468286 AGERQ15109 404 aa13.06□□□□□ -0.32
SGIP1-207ENST00000468286 C1QTNF2Q9BXJ5 285 aa13.05□□□□□ -0.32
SGIP1-207ENST00000468286 SUZ12Q15022 739 aaKnown RBP13.04□□□□□ -0.32
SGIP1-207ENST00000468286 DNMT3LQ9UJW3 386 aa13.04□□□□□ -0.32
SGIP1-207ENST00000468286 MAP4K5Q9Y4K4 846 aa13.04□□□□□ -0.32
SGIP1-207ENST00000468286 ARMC2Q8NEN0 867 aa13.03□□□□□ -0.32
SGIP1-207ENST00000468286 RIC3Q7Z5B4 369 aa13.01□□□□□ -0.33
SGIP1-207ENST00000468286 SH3RF1Q7Z6J0 888 aa13.01□□□□□ -0.33
SGIP1-207ENST00000468286 TRMT44Q8IYL2 757 aaKnown RBP13.01□□□□□ -0.33
SGIP1-207ENST00000468286 TSEN34Q9BSV6 310 aaKnown RBP13.01□□□□□ -0.33
SGIP1-207ENST00000468286 PER1O15534 1290 aaPredicted RBP13□□□□□ -0.33
SGIP1-207ENST00000468286 PARP9Q8IXQ6 854 aa13□□□□□ -0.33
SGIP1-207ENST00000468286 FSHRP23945 695 aa12.98□□□□□ -0.33
SGIP1-207ENST00000468286 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.98□□□□□ -0.33
SGIP1-207ENST00000468286 KCTD17Q8N5Z5 321 aa12.98□□□□□ -0.33
SGIP1-207ENST00000468286 CABLES1Q8TDN4 633 aa12.98□□□□□ -0.33
SGIP1-207ENST00000468286 EMILIN1Q9Y6C2 1016 aa12.98□□□□□ -0.33
SGIP1-207ENST00000468286 KRT76Q01546 638 aa12.97□□□□□ -0.33
SGIP1-207ENST00000468286 NBPF14Q5TI25 921 aa12.97□□□□□ -0.33
SGIP1-207ENST00000468286 RNF225M0QZC1 329 aaPredicted RBP12.96□□□□□ -0.33
SGIP1-207ENST00000468286 TUSC1Q2TAM9 212 aa12.96□□□□□ -0.33
SGIP1-207ENST00000468286 SH3BP5LQ7L8J4 393 aa12.96□□□□□ -0.33
SGIP1-207ENST00000468286 ZC3H15Q8WU90 426 aaKnown RBP12.96□□□□□ -0.33
SGIP1-207ENST00000468286 VASH1Q7L8A9 365 aaPredicted RBP12.95□□□□□ -0.34
SGIP1-207ENST00000468286 TMEM151AQ8N4L1 468 aa12.95□□□□□ -0.34
SGIP1-207ENST00000468286 GPR161Q8N6U8 529 aaKnown RBP12.95□□□□□ -0.34
SGIP1-207ENST00000468286 TTLL8A6PVC2 850 aa12.94□□□□□ -0.34
SGIP1-207ENST00000468286 RASSF7Q02833 373 aa12.94□□□□□ -0.34
SGIP1-207ENST00000468286 CCDC116Q8IYX3 515 aa12.94□□□□□ -0.34
SGIP1-207ENST00000468286 NANOS1Q8WY41 292 aaKnown RBP12.94□□□□□ -0.34
SGIP1-207ENST00000468286 GDF11O95390 407 aa12.92□□□□□ -0.34
SGIP1-207ENST00000468286 PTSQ03393 145 aa12.92□□□□□ -0.34
SGIP1-207ENST00000468286 CNTNAP3BQ96NU0 1288 aa12.92□□□□□ -0.34
SGIP1-207ENST00000468286 CNTNAP3Q9BZ76 1288 aa12.92□□□□□ -0.34
SGIP1-207ENST00000468286 ADAMTS8Q9UP79 889 aa12.92□□□□□ -0.34
SGIP1-207ENST00000468286 CSPP1Q1MSJ5 1256 aa12.91□□□□□ -0.34
SGIP1-207ENST00000468286 GPKOWQ92917 476 aaPredicted RBP eCLIP12.91□□□□□ -0.34
SGIP1-207ENST00000468286 TRIM66O15016 1216 aa12.89□□□□□ -0.35
SGIP1-207ENST00000468286 LILRB3O75022 631 aa12.89□□□□□ -0.35
SGIP1-207ENST00000468286 QPCTQ16769 361 aa12.89□□□□□ -0.35
SGIP1-207ENST00000468286 Q6ZVU0 165 aa12.89□□□□□ -0.35
SGIP1-207ENST00000468286 TSC1Q92574 1164 aa12.89□□□□□ -0.35
SGIP1-207ENST00000468286 NUTM2BA6NNL0 878 aaPredicted RBP12.88□□□□□ -0.35
SGIP1-207ENST00000468286 NUTM2EB1AL46 878 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms