RNA–Protein interactions for RNA: ENST00000468108.1

CCDC66-211, Transcript of coiled-coil domain containing 66, humanhuman

TSL 4

Gene CCDC66, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-211ENST00000468108 PPFIA3O75145 1194 aa10.08□□□□□ -0.8
CCDC66-211ENST00000468108 KLF16Q9BXK1 252 aaPredicted RBP10.08□□□□□ -0.8
CCDC66-211ENST00000468108 EVA1BQ9NVM1 165 aa10.08□□□□□ -0.8
CCDC66-211ENST00000468108 C6orf229H3BNL8 230 aa10.07□□□□□ -0.8
CCDC66-211ENST00000468108 NUTM1Q86Y26 1132 aa10.07□□□□□ -0.8
CCDC66-211ENST00000468108 RNF225M0QZC1 329 aaPredicted RBP10.06□□□□□ -0.8
CCDC66-211ENST00000468108 FDX1P10109 184 aa10.06□□□□□ -0.8
CCDC66-211ENST00000468108 KCNH2Q12809 1159 aa10.06□□□□□ -0.8
CCDC66-211ENST00000468108 PCDHGC3Q9UN70 934 aa10.06□□□□□ -0.8
CCDC66-211ENST00000468108 IRF6O14896 467 aa10.05□□□□□ -0.8
CCDC66-211ENST00000468108 C6orf118Q5T5N4 469 aa10.05□□□□□ -0.8
CCDC66-211ENST00000468108 ZFAND3Q9H8U3 227 aa10.04□□□□□ -0.8
CCDC66-211ENST00000468108 ZIC2O95409 532 aaPredicted RBP10.03□□□□□ -0.8
CCDC66-211ENST00000468108 FAM217BQ9NTX9 383 aaPredicted RBP10.03□□□□□ -0.8
CCDC66-211ENST00000468108 ADAMTS8Q9UP79 889 aa10.03□□□□□ -0.8
CCDC66-211ENST00000468108 KRT76Q01546 638 aa10.02□□□□□ -0.81
CCDC66-211ENST00000468108 FAM174AQ8TBP5 190 aa10.02□□□□□ -0.81
CCDC66-211ENST00000468108 GPCPD1Q9NPB8 672 aa10.02□□□□□ -0.81
CCDC66-211ENST00000468108 ITPKCQ96DU7 683 aa10.01□□□□□ -0.81
CCDC66-211ENST00000468108 CLCN1P35523 988 aa10□□□□□ -0.81
CCDC66-211ENST00000468108 BMP2P12643 396 aa9.99□□□□□ -0.81
CCDC66-211ENST00000468108 CNTNAP3BQ96NU0 1288 aa9.99□□□□□ -0.81
CCDC66-211ENST00000468108 CDK15Q96Q40 435 aa9.99□□□□□ -0.81
CCDC66-211ENST00000468108 CNTNAP3Q9BZ76 1288 aa9.99□□□□□ -0.81
CCDC66-211ENST00000468108 GPR161Q8N6U8 529 aaKnown RBP9.98□□□□□ -0.81
CCDC66-211ENST00000468108 PRR7Q8TB68 274 aa9.98□□□□□ -0.81
CCDC66-211ENST00000468108 MINK1Q8N4C8 1332 aaPredicted RBP9.98□□□□□ -0.81
CCDC66-211ENST00000468108 UPP2O95045 317 aa9.97□□□□□ -0.81
CCDC66-211ENST00000468108 ARID5BQ14865 1188 aa9.97□□□□□ -0.81
CCDC66-211ENST00000468108 LINC00528Q8N1L1 170 aa9.97□□□□□ -0.81
CCDC66-211ENST00000468108 CCDC102AQ96A19 550 aa9.97□□□□□ -0.81
CCDC66-211ENST00000468108 DNMT3LQ9UJW3 386 aa9.97□□□□□ -0.81
CCDC66-211ENST00000468108 NR3C2P08235 984 aa9.96□□□□□ -0.82
CCDC66-211ENST00000468108 GPAT2Q6NUI2 795 aa9.96□□□□□ -0.82
CCDC66-211ENST00000468108 NR5A1Q13285 461 aa9.95□□□□□ -0.82
CCDC66-211ENST00000468108 DESI1Q6ICB0 168 aa9.95□□□□□ -0.82
CCDC66-211ENST00000468108 MEIOBQ8N635 442 aa9.95□□□□□ -0.82
CCDC66-211ENST00000468108 DNMT3AQ9Y6K1 912 aaPredicted RBP9.95□□□□□ -0.82
CCDC66-211ENST00000468108 SOS2Q07890 1332 aaPredicted RBP9.95□□□□□ -0.82
CCDC66-211ENST00000468108 FOXJ1Q92949 421 aa9.94□□□□□ -0.82
CCDC66-211ENST00000468108 SLC24A1O60721 1099 aa9.93□□□□□ -0.82
CCDC66-211ENST00000468108 NDUFV2P19404 249 aa9.93□□□□□ -0.82
CCDC66-211ENST00000468108 CTHP32929 405 aa9.93□□□□□ -0.82
CCDC66-211ENST00000468108 ZNF385CQ66K41 422 aaPredicted RBP9.93□□□□□ -0.82
CCDC66-211ENST00000468108 SVOPQ8N4V2 548 aa9.93□□□□□ -0.82
CCDC66-211ENST00000468108 COL25A1Q9BXS0 654 aaPredicted RBP9.93□□□□□ -0.82
CCDC66-211ENST00000468108 IGHA1P01876 353 aa9.92□□□□□ -0.82
CCDC66-211ENST00000468108 SPIRE2Q8WWL2 714 aa9.92□□□□□ -0.82
CCDC66-211ENST00000468108 IRS1P35568 1242 aa9.91□□□□□ -0.82
CCDC66-211ENST00000468108 MTMR2Q13614 643 aa9.91□□□□□ -0.82
CCDC66-211ENST00000468108 KRI1Q8N9T8 703 aaKnown RBP9.91□□□□□ -0.82
CCDC66-211ENST00000468108 MOXD2PA6NHM9 499 aa9.9□□□□□ -0.82
CCDC66-211ENST00000468108 SPDYE5A6NIY4 337 aa9.9□□□□□ -0.82
CCDC66-211ENST00000468108 GRM5P41594 1212 aa9.9□□□□□ -0.82
CCDC66-211ENST00000468108 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.9□□□□□ -0.82
CCDC66-211ENST00000468108 SPTLC1O15269 473 aa9.89□□□□□ -0.83
CCDC66-211ENST00000468108 PTSQ03393 145 aa9.88□□□□□ -0.83
CCDC66-211ENST00000468108 RNFT1Q5M7Z0 435 aa9.88□□□□□ -0.83
CCDC66-211ENST00000468108 LYPD8Q6UX82 237 aa9.88□□□□□ -0.83
CCDC66-211ENST00000468108 FOXK2Q01167 660 aa9.87□□□□□ -0.83
CCDC66-211ENST00000468108 AGERQ15109 404 aa9.87□□□□□ -0.83
CCDC66-211ENST00000468108 C4orf48Q5BLP8 95 aa9.87□□□□□ -0.83
CCDC66-211ENST00000468108 WHAMMQ8TF30 809 aa9.87□□□□□ -0.83
CCDC66-211ENST00000468108 NANOS1Q8WY41 292 aaKnown RBP9.87□□□□□ -0.83
CCDC66-211ENST00000468108 MAP10Q9P2G4 905 aa9.87□□□□□ -0.83
CCDC66-211ENST00000468108 TTLL8A6PVC2 850 aa9.86□□□□□ -0.83
CCDC66-211ENST00000468108 KANK3Q6NY19 840 aa9.86□□□□□ -0.83
CCDC66-211ENST00000468108 TSEN34Q9BSV6 310 aaKnown RBP9.86□□□□□ -0.83
CCDC66-211ENST00000468108 ARHGEF15O94989 841 aa9.85□□□□□ -0.83
CCDC66-211ENST00000468108 SLURP2P0DP57 97 aa9.85□□□□□ -0.83
CCDC66-211ENST00000468108 SSTR3P32745 418 aaPredicted RBP9.85□□□□□ -0.83
CCDC66-211ENST00000468108 XP32Q5T750 250 aa9.85□□□□□ -0.83
CCDC66-211ENST00000468108 F12P00748 615 aaPredicted RBP9.84□□□□□ -0.83
CCDC66-211ENST00000468108 MARSP56192 900 aaKnown RBP9.84□□□□□ -0.83
CCDC66-211ENST00000468108 FSHRP23945 695 aa9.83□□□□□ -0.84
CCDC66-211ENST00000468108 BPHLQ86WA6 291 aaPredicted RBP9.83□□□□□ -0.84
CCDC66-211ENST00000468108 CCDC155Q8N6L0 562 aa9.83□□□□□ -0.84
CCDC66-211ENST00000468108 FIGNL2A6NMB9 653 aa9.82□□□□□ -0.84
CCDC66-211ENST00000468108 CFAP99D6REC4 459 aa9.8□□□□□ -0.84
CCDC66-211ENST00000468108 SCARF2Q96GP6 870 aaPredicted RBP9.8□□□□□ -0.84
CCDC66-211ENST00000468108 EMILIN1Q9Y6C2 1016 aa9.8□□□□□ -0.84
CCDC66-211ENST00000468108 C1QTNF2Q9BXJ5 285 aa9.79□□□□□ -0.84
CCDC66-211ENST00000468108 SLC35F4A4IF30 521 aa9.78□□□□□ -0.84
CCDC66-211ENST00000468108 TULP1O00294 542 aaPredicted RBP9.78□□□□□ -0.84
CCDC66-211ENST00000468108 VASH1Q7L8A9 365 aaPredicted RBP9.78□□□□□ -0.84
CCDC66-211ENST00000468108 VWA5B2Q8N398 1253 aa9.78□□□□□ -0.84
CCDC66-211ENST00000468108 MAP4K5Q9Y4K4 846 aa9.78□□□□□ -0.84
CCDC66-211ENST00000468108 CDC14CA4D256 554 aa9.77□□□□□ -0.85
CCDC66-211ENST00000468108 ITGA6P23229 1130 aa9.77□□□□□ -0.85
CCDC66-211ENST00000468108 GJA5P36382 358 aa9.77□□□□□ -0.85
CCDC66-211ENST00000468108 CCDC116Q8IYX3 515 aa9.77□□□□□ -0.85
CCDC66-211ENST00000468108 RSBN1LQ6PCB5 846 aaPredicted RBP9.76□□□□□ -0.85
CCDC66-211ENST00000468108 SV2AQ7L0J3 742 aa9.76□□□□□ -0.85
CCDC66-211ENST00000468108 PCDHB15Q9Y5E8 787 aa9.75□□□□□ -0.85
CCDC66-211ENST00000468108 SPINT1O43278 529 aa9.74□□□□□ -0.85
CCDC66-211ENST00000468108 ADAM23O75077 832 aa9.74□□□□□ -0.85
CCDC66-211ENST00000468108 SH3RF1Q7Z6J0 888 aa9.74□□□□□ -0.85
CCDC66-211ENST00000468108 ADAMTS2O95450 1211 aa9.73□□□□□ -0.85
CCDC66-211ENST00000468108 HRCP23327 699 aa9.73□□□□□ -0.85
CCDC66-211ENST00000468108 CBLBQ13191 982 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms